RNA–Protein interactions for RNA: YER116C

SLX8, Transcript of Subunit of Slx5-Slx8 SUMO-targeted ubiquitin ligase (STUbL) complex, yeast

Gene SLX8, Length 825 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SLX8	YER116C	SRO7	Q12038	1033 aa		3.87	□□□□□ -1.79
SLX8	YER116C	DAP1	Q12091	152 aa		3.87	□□□□□ -1.79
SLX8	YER116C	YPR1	Q12458	312 aa		3.87	□□□□□ -1.79
SLX8	YER116C	RMD5	Q12508	421 aa		3.87	□□□□□ -1.79
SLX8	YER116C	RAV1	P47104	1357 aa		3.87	□□□□□ -1.79
SLX8	YER116C	GAL10	P04397	699 aa		3.86	□□□□□ -1.79
SLX8	YER116C	RHO2	P06781	192 aa		3.86	□□□□□ -1.79
SLX8	YER116C	COR1	P07256	457 aa		3.86	□□□□□ -1.79
SLX8	YER116C	RIP1	P08067	215 aa		3.86	□□□□□ -1.79
SLX8	YER116C	MET3	P08536	511 aa		3.86	□□□□□ -1.79
SLX8	YER116C	RPS16A	P0CX51	143 aa	Known RBP	3.86	□□□□□ -1.79
SLX8	YER116C	RPS16B	P0CX52	143 aa	Known RBP	3.86	□□□□□ -1.79
SLX8	YER116C	MET16	P18408	261 aa	Predicted RBP	3.86	□□□□□ -1.79
SLX8	YER116C	CMK2	P22517	447 aa		3.86	□□□□□ -1.79
SLX8	YER116C	LAC1	P28496	418 aa		3.86	□□□□□ -1.79
SLX8	YER116C	CDC5	P32562	705 aa		3.86	□□□□□ -1.79
SLX8	YER116C	TRM2	P33753	639 aa		3.86	□□□□□ -1.79
SLX8	YER116C	HES1	P35843	434 aa		3.86	□□□□□ -1.79
SLX8	YER116C	YPT52	P36018	234 aa	Known RBP	3.86	□□□□□ -1.79
SLX8	YER116C	ELF1	P36053	145 aa		3.86	□□□□□ -1.79
SLX8	YER116C	RRP4	P38792	359 aa	Known RBP	3.86	□□□□□ -1.79
SLX8	YER116C	BIG1	P38813	335 aa		3.86	□□□□□ -1.79
SLX8	YER116C	SBE22	P38814	852 aa		3.86	□□□□□ -1.79
SLX8	YER116C	FMO1	P38866	432 aa		3.86	□□□□□ -1.79
SLX8	YER116C	PEX7	P39108	375 aa		3.86	□□□□□ -1.79
SLX8	YER116C	CIN4	P39110	191 aa		3.86	□□□□□ -1.79
SLX8	YER116C	MBB1	P39534	108 aa		3.86	□□□□□ -1.79
SLX8	YER116C	DSN1	P40568	576 aa		3.86	□□□□□ -1.79
SLX8	YER116C	STB4	P50104	949 aa		3.86	□□□□□ -1.79
SLX8	YER116C	DIA1	P54005	336 aa		3.86	□□□□□ -1.79
SLX8	YER116C	UBP16	Q02863	499 aa		3.86	□□□□□ -1.79
SLX8	YER116C	MSC1	Q03104	513 aa		3.86	□□□□□ -1.79
SLX8	YER116C	YML053C	Q04978	212 aa		3.86	□□□□□ -1.79
SLX8	YER116C	MDM30	Q05930	598 aa		3.86	□□□□□ -1.79
SLX8	YER116C	DUS4	Q06063	367 aa		3.86	□□□□□ -1.79
SLX8	YER116C	ATG26	Q06321	1198 aa		3.86	□□□□□ -1.79
SLX8	YER116C	IZH3	Q07959	543 aa		3.86	□□□□□ -1.79
SLX8	YER116C	GRE1	Q08969	168 aa		3.86	□□□□□ -1.79
SLX8	YER116C	COX2	P00410	251 aa		3.85	□□□□□ -1.79
SLX8	YER116C	ADE4	P04046	510 aa	Known RBP	3.85	□□□□□ -1.79
SLX8	YER116C	RPL27A	P0C2H6	136 aa	Known RBP	3.85	□□□□□ -1.79
SLX8	YER116C	RPL27B	P0C2H7	136 aa	Known RBP	3.85	□□□□□ -1.79
SLX8	YER116C	YPK1	P12688	680 aa	Known RBP	3.85	□□□□□ -1.79
SLX8	YER116C	PCT1	P13259	424 aa		3.85	□□□□□ -1.79
SLX8	YER116C	RPL24B	P24000	155 aa	Known RBP	3.85	□□□□□ -1.79
SLX8	YER116C	DPB2	P24482	689 aa	Predicted RBP	3.85	□□□□□ -1.79
SLX8	YER116C	ATP7	P30902	174 aa		3.85	□□□□□ -1.79
SLX8	YER116C	SIN4	P32259	974 aa		3.85	□□□□□ -1.79
SLX8	YER116C	REC114	P32841	428 aa		3.85	□□□□□ -1.79
SLX8	YER116C	PRP18	P33411	251 aa	Predicted RBP	3.85	□□□□□ -1.79
SLX8	YER116C	COS9	P36034	407 aa		3.85	□□□□□ -1.79
SLX8	YER116C	DOA1	P36037	715 aa		3.85	□□□□□ -1.79
SLX8	YER116C	CBT1	P36038	271 aa	Predicted RBP	3.85	□□□□□ -1.79
SLX8	YER116C	RRN10	P38204	145 aa		3.85	□□□□□ -1.79
SLX8	YER116C	UBA4	P38820	440 aa		3.85	□□□□□ -1.79
SLX8	YER116C	YHR122W	P38829	231 aa		3.85	□□□□□ -1.79
SLX8	YER116C	PFS1	P38872	237 aa		3.85	□□□□□ -1.79
SLX8	YER116C	SUR2	P38992	349 aa		3.85	□□□□□ -1.79
SLX8	YER116C	SEC72	P39742	193 aa	Known RBP	3.85	□□□□□ -1.79
SLX8	YER116C	PAC11	P40960	533 aa		3.85	□□□□□ -1.79
SLX8	YER116C	KAP114	P53067	1004 aa		3.85	□□□□□ -1.79
SLX8	YER116C	MRPL50	P53724	139 aa		3.85	□□□□□ -1.79
SLX8	YER116C	APM1	Q00776	475 aa	Predicted RBP	3.85	□□□□□ -1.79
SLX8	YER116C	SLU7	Q02775	382 aa	Known RBP	3.85	□□□□□ -1.79
SLX8	YER116C	IZH1	Q03419	316 aa		3.85	□□□□□ -1.79
SLX8	YER116C	IVY1	Q04934	453 aa		3.85	□□□□□ -1.79
SLX8	YER116C	BUR2	Q05949	395 aa		3.85	□□□□□ -1.79
SLX8	YER116C	CDA2	Q06703	312 aa		3.85	□□□□□ -1.79
SLX8	YER116C	YDL242W	Q07746	117 aa		3.85	□□□□□ -1.79
SLX8	YER116C	NSE1	Q07913	336 aa		3.85	□□□□□ -1.79
SLX8	YER116C	ABP140	Q08641	628 aa	Known RBP	3.85	□□□□□ -1.79
SLX8	YER116C	ADH2	P00331	348 aa	Known RBP	3.84	□□□□□ -1.79
SLX8	YER116C	TEF1	P02994	458 aa	Known RBP	3.84	□□□□□ -1.79
SLX8	YER116C	RAD7	P06779	565 aa		3.84	□□□□□ -1.79
SLX8	YER116C	CHS1	P08004	1131 aa		3.84	□□□□□ -1.79
SLX8	YER116C	HEM1	P09950	548 aa	Predicted RBP	3.84	□□□□□ -1.79
SLX8	YER116C	ATP10	P18496	279 aa		3.84	□□□□□ -1.79
SLX8	YER116C	AMD2	P22580	549 aa		3.84	□□□□□ -1.79
SLX8	YER116C	SGV1	P23293	657 aa	Known RBP	3.84	□□□□□ -1.79
SLX8	YER116C	RPS5	P26783	225 aa	Known RBP	3.84	□□□□□ -1.79
SLX8	YER116C	DEP1	P31385	405 aa		3.84	□□□□□ -1.79
SLX8	YER116C	RGT1	P32862	1170 aa		3.84	□□□□□ -1.79
SLX8	YER116C	SKT5	P34226	696 aa		3.84	□□□□□ -1.79
SLX8	YER116C	SOR1	P35497	357 aa	Known RBP	3.84	□□□□□ -1.79
SLX8	YER116C	VPS51	P36116	164 aa		3.84	□□□□□ -1.79
SLX8	YER116C	RIB1	P38066	345 aa		3.84	□□□□□ -1.79
SLX8	YER116C	TSC10	P38342	320 aa		3.84	□□□□□ -1.79
SLX8	YER116C	INM1	P38710	295 aa		3.84	□□□□□ -1.79
SLX8	YER116C	UTP25	P40498	721 aa	Known RBP	3.84	□□□□□ -1.79
SLX8	YER116C	SCD6	P45978	349 aa	Known RBP RIP-Chip data	3.84	□□□□□ -1.79	RIP-Chip
SLX8	YER116C	YAR1	P46683	200 aa		3.84	□□□□□ -1.79
SLX8	YER116C	SNG1	P46950	547 aa		3.84	□□□□□ -1.79
SLX8	YER116C	MRX5	P47007	382 aa		3.84	□□□□□ -1.79
SLX8	YER116C	IBA57	P47158	497 aa		3.84	□□□□□ -1.79
SLX8	YER116C	YPT11	P48559	417 aa		3.84	□□□□□ -1.79
SLX8	YER116C	SLX9	P53251	210 aa	Predicted RBP	3.84	□□□□□ -1.79
SLX8	YER116C	SLI1	P53304	468 aa		3.84	□□□□□ -1.79
SLX8	YER116C	VAC7	P53950	1165 aa		3.84	□□□□□ -1.79
SLX8	YER116C	SLG1	P54867	378 aa		3.84	□□□□□ -1.79
SLX8	YER116C	FMP30	Q02883	468 aa		3.84	□□□□□ -1.79

Retrieved 100 of 5,963 RNA–protein pairs in 45.3 ms