RNA–Protein interactions for RNA: YDR432W

NPL3, Transcript of RNA-binding protein, yeast

Gene NPL3, Length 1,245 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NPL3	YDR432W	TMA22	P47089	198 aa	Predicted RBP	11.81	□□□□□ -0.52
NPL3	YDR432W	YJR141W	P47172	347 aa	Predicted RBP	11.81	□□□□□ -0.52
NPL3	YDR432W	GTO1	P48239	356 aa		11.81	□□□□□ -0.52
NPL3	YDR432W	MUP1	P50276	574 aa		11.81	□□□□□ -0.52
NPL3	YDR432W	GOR1	P53839	350 aa		11.81	□□□□□ -0.52
NPL3	YDR432W	YVC1	Q12324	675 aa		11.81	□□□□□ -0.52
NPL3	YDR432W	PHO2	P07269	559 aa		11.8	□□□□□ -0.52
NPL3	YDR432W	DEP1	P31385	405 aa		11.8	□□□□□ -0.52
NPL3	YDR432W	MSN2	P33748	704 aa		11.8	□□□□□ -0.52
NPL3	YDR432W	COS111	P38308	924 aa		11.8	□□□□□ -0.52
NPL3	YDR432W	TRR2	P38816	342 aa		11.8	□□□□□ -0.52
NPL3	YDR432W	YEL057C	P39983	233 aa		11.8	□□□□□ -0.52
NPL3	YDR432W	SEH1	P53011	349 aa	Known RBP	11.8	□□□□□ -0.52
NPL3	YDR432W	YPR172W	Q06608	200 aa		11.8	□□□□□ -0.52
NPL3	YDR432W	YKL033W-A	Q86ZR7	236 aa		11.8	□□□□□ -0.52
NPL3	YDR432W	AAR2	P32357	355 aa	Predicted RBP	11.79	□□□□□ -0.52
NPL3	YDR432W	STE14	P32584	239 aa		11.79	□□□□□ -0.52
NPL3	YDR432W	AUR1	P36107	401 aa	Predicted RBP	11.79	□□□□□ -0.52
NPL3	YDR432W	IRC6	P43615	237 aa		11.79	□□□□□ -0.52
NPL3	YDR432W	ATP22	P50273	684 aa	Predicted RBP	11.79	□□□□□ -0.52
NPL3	YDR432W	YMR102C	Q03177	834 aa		11.79	□□□□□ -0.52
NPL3	YDR432W	YPR091C	Q06833	770 aa		11.79	□□□□□ -0.52
NPL3	YDR432W	SGT1	Q08446	395 aa		11.79	□□□□□ -0.52
NPL3	YDR432W	UAF30	Q08747	228 aa		11.79	□□□□□ -0.52
NPL3	YDR432W	RPN5	Q12250	445 aa	Known RBP	11.79	□□□□□ -0.52
NPL3	YDR432W	PRS5	Q12265	496 aa	Known RBP	11.79	□□□□□ -0.52
NPL3	YDR432W	PTR2	P32901	601 aa		11.78	□□□□□ -0.52
NPL3	YDR432W	GIP2	P40036	548 aa		11.78	□□□□□ -0.52
NPL3	YDR432W	BNA3	P47039	444 aa	Known RBP	11.78	□□□□□ -0.52
NPL3	YDR432W	APS3	P47064	194 aa		11.78	□□□□□ -0.52
NPL3	YDR432W	BSC5	P53755	489 aa		11.78	□□□□□ -0.52
NPL3	YDR432W	ATG4	P53867	494 aa		11.78	□□□□□ -0.52
NPL3	YDR432W	ATG21	Q02887	496 aa		11.78	□□□□□ -0.52
NPL3	YDR432W	VPS74	Q06385	345 aa		11.78	□□□□□ -0.52
NPL3	YDR432W	YPR096C	O13587	100 aa		11.77	□□□□□ -0.53
NPL3	YDR432W	HTA2	P04912	132 aa		11.77	□□□□□ -0.53
NPL3	YDR432W	DGR2	P32330	852 aa		11.77	□□□□□ -0.53
NPL3	YDR432W	CUE2	P36075	443 aa	Known RBP	11.77	□□□□□ -0.53
NPL3	YDR432W	TSC10	P38342	320 aa		11.77	□□□□□ -0.53
NPL3	YDR432W	YIL067C	P40514	678 aa		11.77	□□□□□ -0.53
NPL3	YDR432W	TED1	P40533	473 aa		11.77	□□□□□ -0.53
NPL3	YDR432W	HSV2	P50079	448 aa	Predicted RBP	11.77	□□□□□ -0.53
NPL3	YDR432W	YPL068C	Q02749	293 aa		11.77	□□□□□ -0.53
NPL3	YDR432W	YOR365C	Q08844	703 aa		11.77	□□□□□ -0.53
NPL3	YDR432W	YPR202W	Q08993	238 aa		11.77	□□□□□ -0.53
NPL3	YDR432W	SAS5	Q99314	248 aa		11.77	□□□□□ -0.53
NPL3	YDR432W	SSA3	P09435	649 aa	Known RBP	11.76	□□□□□ -0.53
NPL3	YDR432W	MKK1	P32490	508 aa		11.76	□□□□□ -0.53
NPL3	YDR432W	VPS51	P36116	164 aa		11.76	□□□□□ -0.53
NPL3	YDR432W	TAT2	P38967	592 aa		11.76	□□□□□ -0.53
NPL3	YDR432W	SEC26	P41810	973 aa	Known RBP	11.76	□□□□□ -0.53
NPL3	YDR432W	CCT7	P42943	550 aa	Known RBP	11.76	□□□□□ -0.53
NPL3	YDR432W	BPL1	P48445	690 aa	Predicted RBP	11.76	□□□□□ -0.53
NPL3	YDR432W	RPN14	P53196	417 aa		11.76	□□□□□ -0.53
NPL3	YDR432W	GTR1	Q00582	310 aa		11.76	□□□□□ -0.53
NPL3	YDR432W	SKI8	Q02793	397 aa	Predicted RBP	11.76	□□□□□ -0.53
NPL3	YDR432W	SPC24	Q04477	213 aa		11.76	□□□□□ -0.53
NPL3	YDR432W	PUN1	Q06991	263 aa		11.76	□□□□□ -0.53
NPL3	YDR432W	OSW1	Q08692	278 aa		11.76	□□□□□ -0.53
NPL3	YDR432W	YOS9	Q99220	542 aa		11.76	□□□□□ -0.53
NPL3	YDR432W	CTS1	P29029	562 aa		11.75	□□□□□ -0.53
NPL3	YDR432W	CAT2	P32796	670 aa	Known RBP	11.75	□□□□□ -0.53
NPL3	YDR432W	SSO1	P32867	290 aa		11.75	□□□□□ -0.53
NPL3	YDR432W	TDA11	P38854	504 aa		11.75	□□□□□ -0.53
NPL3	YDR432W	PMT4	P46971	762 aa		11.75	□□□□□ -0.53
NPL3	YDR432W	RHO4	Q00246	291 aa		11.75	□□□□□ -0.53
NPL3	YDR432W	SMA2	Q04658	369 aa		11.75	□□□□□ -0.53
NPL3	YDR432W	GMC2	Q06201	188 aa		11.75	□□□□□ -0.53
NPL3	YDR432W	YPL225W	Q08971	146 aa	Known RBP	11.75	□□□□□ -0.53
NPL3	YDR432W	WTM2	Q12206	467 aa		11.75	□□□□□ -0.53
NPL3	YDR432W	ALG7	P07286	448 aa		11.74	□□□□□ -0.53
NPL3	YDR432W	RPB5	P20434	215 aa		11.74	□□□□□ -0.53
NPL3	YDR432W	GPI12	P23797	304 aa		11.74	□□□□□ -0.53
NPL3	YDR432W	SSE1	P32589	693 aa	Known RBP	11.74	□□□□□ -0.53
NPL3	YDR432W	RPT5	P33297	434 aa	Known RBP	11.74	□□□□□ -0.53
NPL3	YDR432W	FRE2	P36033	711 aa		11.74	□□□□□ -0.53
NPL3	YDR432W	FES1	P38260	290 aa		11.74	□□□□□ -0.53
NPL3	YDR432W	TRM5	P38793	499 aa		11.74	□□□□□ -0.53
NPL3	YDR432W	PKP1	P40530	394 aa		11.74	□□□□□ -0.53
NPL3	YDR432W	MTR3	P48240	250 aa	Predicted RBP	11.74	□□□□□ -0.53
NPL3	YDR432W	IMA1	P53051	589 aa		11.74	□□□□□ -0.53
NPL3	YDR432W	ARI1	P53111	347 aa	Known RBP	11.74	□□□□□ -0.53
NPL3	YDR432W	COG2	P53271	262 aa		11.74	□□□□□ -0.53
NPL3	YDR432W	PBP1	P53297	722 aa	Known RBP	11.74	□□□□□ -0.53
NPL3	YDR432W	PDR16	P53860	351 aa	Known RBP	11.74	□□□□□ -0.53
NPL3	YDR432W	YSA1	Q01976	231 aa		11.74	□□□□□ -0.53
NPL3	YDR432W	FDH1	Q08911	376 aa		11.74	□□□□□ -0.53
NPL3	YDR432W	JLP1	Q12358	412 aa		11.74	□□□□□ -0.53
NPL3	YDR432W	PRP46	Q12417	451 aa	Predicted RBP	11.74	□□□□□ -0.53
NPL3	YDR432W	ATP4	P05626	244 aa		11.73	□□□□□ -0.53
NPL3	YDR432W	RPL20A	P0CX23	172 aa	Known RBP	11.73	□□□□□ -0.53
NPL3	YDR432W	RPL20B	P0CX24	172 aa	Predicted RBP	11.73	□□□□□ -0.53
NPL3	YDR432W	DAP2	P18962	818 aa		11.73	□□□□□ -0.53
NPL3	YDR432W	CCA1	P21269	546 aa		11.73	□□□□□ -0.53
NPL3	YDR432W	PDB1	P32473	366 aa	Known RBP	11.73	□□□□□ -0.53
NPL3	YDR432W	GLG1	P36143	616 aa		11.73	□□□□□ -0.53
NPL3	YDR432W	ECO1	P43605	281 aa		11.73	□□□□□ -0.53
NPL3	YDR432W	EMC2	P47133	292 aa	Known RBP	11.73	□□□□□ -0.53
NPL3	YDR432W	YLR460C	P54007	376 aa		11.73	□□□□□ -0.53
NPL3	YDR432W	RPM2	Q02773	1202 aa		11.73	□□□□□ -0.53

Retrieved 100 of 5,963 RNA–protein pairs in 20.7 ms