RNA–Protein interactions for RNA: YDR192C

NUP42, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP42, Length 1,293 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP42YDR192C YPR204C-AP0CX98 160 aa4.48□□□□□ -1.69
NUP42YDR192C MEI4P29467 408 aa4.48□□□□□ -1.69
NUP42YDR192C SNC1P31109 117 aa4.48□□□□□ -1.69
NUP42YDR192C ECM32P32644 1121 aaKnown RBP4.48□□□□□ -1.69
NUP42YDR192C TOA1P32773 286 aa4.48□□□□□ -1.69
NUP42YDR192C SRB2P34162 210 aa4.48□□□□□ -1.69
NUP42YDR192C TIF3P34167 436 aaKnown RBP4.48□□□□□ -1.69
NUP42YDR192C CMC1P36064 111 aa4.48□□□□□ -1.69
NUP42YDR192C MSG5P38590 489 aa4.48□□□□□ -1.69
NUP42YDR192C MSR1P38714 643 aa4.48□□□□□ -1.69
NUP42YDR192C FLO5P38894 1075 aa4.48□□□□□ -1.69
NUP42YDR192C CCT2P39076 527 aaKnown RBP4.48□□□□□ -1.69
NUP42YDR192C PRM9P39551 298 aa4.48□□□□□ -1.69
NUP42YDR192C MAF1P41910 395 aa4.48□□□□□ -1.69
NUP42YDR192C RPS0BP46654 252 aaKnown RBP4.48□□□□□ -1.69
NUP42YDR192C CTK3P46963 296 aaPredicted RBP4.48□□□□□ -1.69
NUP42YDR192C MDV1P47025 714 aa4.48□□□□□ -1.69
NUP42YDR192C PET130P47065 347 aa4.48□□□□□ -1.69
NUP42YDR192C PYK2P52489 506 aaKnown RBP4.48□□□□□ -1.69
NUP42YDR192C HOS2P53096 452 aaPredicted RBP4.48□□□□□ -1.69
NUP42YDR192C YGR126WP53274 230 aa4.48□□□□□ -1.69
NUP42YDR192C KTR5P53966 522 aaPredicted RBP4.48□□□□□ -1.69
NUP42YDR192C RPL15BP54780 204 aaPredicted RBP4.48□□□□□ -1.69
NUP42YDR192C MRS2Q01926 470 aa4.48□□□□□ -1.69
NUP42YDR192C DIG1Q03063 452 aaKnown RBP4.48□□□□□ -1.69
NUP42YDR192C YDR239CQ03780 787 aa4.48□□□□□ -1.69
NUP42YDR192C YDL218WQ07629 317 aa4.48□□□□□ -1.69
NUP42YDR192C RDR1Q08904 546 aa4.48□□□□□ -1.69
NUP42YDR192C GPM2Q12008 311 aa4.48□□□□□ -1.69
NUP42YDR192C RLM1Q12224 676 aa4.48□□□□□ -1.69
NUP42YDR192C BRR1Q99177 341 aaPredicted RBP4.48□□□□□ -1.69
NUP42YDR192C TOR1P35169 2470 aa4.48□□□□□ -1.69
NUP42YDR192C CUP1-1P0CX80 61 aa4.47□□□□□ -1.69
NUP42YDR192C CUP1-2P0CX81 61 aa4.47□□□□□ -1.69
NUP42YDR192C GPA2P10823 449 aa4.47□□□□□ -1.69
NUP42YDR192C RNA1P11745 407 aaKnown RBP4.47□□□□□ -1.69
NUP42YDR192C CLB1P24868 471 aa4.47□□□□□ -1.69
NUP42YDR192C CLB3P24870 427 aa4.47□□□□□ -1.69
NUP42YDR192C ERG3P32353 365 aa4.47□□□□□ -1.69
NUP42YDR192C RAD5P32849 1169 aaPredicted RBP4.47□□□□□ -1.69
NUP42YDR192C MRP4P32902 394 aa4.47□□□□□ -1.69
NUP42YDR192C CSE2P33308 149 aa4.47□□□□□ -1.69
NUP42YDR192C TKL2P33315 681 aa4.47□□□□□ -1.69
NUP42YDR192C YPK3P38070 525 aa4.47□□□□□ -1.69
NUP42YDR192C ROT2P38138 954 aa4.47□□□□□ -1.69
NUP42YDR192C LAG1P38703 411 aa4.47□□□□□ -1.69
NUP42YDR192C PCL6P40038 420 aa4.47□□□□□ -1.69
NUP42YDR192C YIR016WP40572 265 aa4.47□□□□□ -1.69
NUP42YDR192C VPS9P54787 451 aa4.47□□□□□ -1.69
NUP42YDR192C TOF2Q02208 771 aa4.47□□□□□ -1.69
NUP42YDR192C RLI1Q03195 608 aaKnown RBP4.47□□□□□ -1.69
NUP42YDR192C RQC1Q05468 723 aaKnown RBP4.47□□□□□ -1.69
NUP42YDR192C YLR281CQ05863 155 aa4.47□□□□□ -1.69
NUP42YDR192C GRX8Q05926 109 aa4.47□□□□□ -1.69
NUP42YDR192C RPS10AQ08745 105 aaPredicted RBP4.47□□□□□ -1.69
NUP42YDR192C YLL056CQ12177 298 aa4.47□□□□□ -1.69
NUP42YDR192C UBX3Q12229 455 aa4.47□□□□□ -1.69
NUP42YDR192C RPL4AP10664 362 aaKnown RBP4.46□□□□□ -1.7
NUP42YDR192C MRP13P12686 339 aa4.46□□□□□ -1.7
NUP42YDR192C GID7P25569 745 aa4.46□□□□□ -1.7
NUP42YDR192C MGT1P26188 188 aa4.46□□□□□ -1.7
NUP42YDR192C SEC66P33754 206 aa4.46□□□□□ -1.7
NUP42YDR192C ASK1P35734 292 aa4.46□□□□□ -1.7
NUP42YDR192C HEL1P36113 551 aa4.46□□□□□ -1.7
NUP42YDR192C SCC4P40090 624 aa4.46□□□□□ -1.7
NUP42YDR192C YIL060WP40519 144 aa4.46□□□□□ -1.7
NUP42YDR192C SGN1P40561 250 aaKnown RBP RIP-Chip data4.46□□□□□ -1.7not detected
NUP42YDR192C HXT9P40885 567 aa4.46□□□□□ -1.7
NUP42YDR192C RPS10BP46784 105 aaKnown RBP4.46□□□□□ -1.7
NUP42YDR192C YJR079WP47126 109 aa4.46□□□□□ -1.7
NUP42YDR192C RPL4BP49626 362 aaKnown RBP4.46□□□□□ -1.7
NUP42YDR192C SCS3P53012 380 aa4.46□□□□□ -1.7
NUP42YDR192C LSC1P53598 329 aaKnown RBP4.46□□□□□ -1.7
NUP42YDR192C DUG3P53871 357 aa4.46□□□□□ -1.7
NUP42YDR192C CDD1Q06549 142 aa4.46□□□□□ -1.7
NUP42YDR192C SSK1Q07084 712 aa4.46□□□□□ -1.7
NUP42YDR192C PKH2Q12236 1081 aaKnown RBP4.46□□□□□ -1.7
NUP42YDR192C NCA2Q12374 616 aa4.46□□□□□ -1.7
NUP42YDR192C EMP46Q12396 444 aa4.46□□□□□ -1.7
NUP42YDR192C YDR524C-BQ3E6R4 66 aa4.46□□□□□ -1.7
NUP42YDR192C EFG1Q3E705 233 aaKnown RBP4.46□□□□□ -1.7
NUP42YDR192C FAB1P34756 2278 aa4.46□□□□□ -1.7
NUP42YDR192C ECM29P38737 1868 aa4.45□□□□□ -1.7
NUP42YDR192C COX4P04037 155 aa4.45□□□□□ -1.7
NUP42YDR192C ADE4P04046 510 aaKnown RBP4.45□□□□□ -1.7
NUP42YDR192C CMD1P06787 147 aaKnown RBP4.45□□□□□ -1.7
NUP42YDR192C MDM10P18409 493 aa4.45□□□□□ -1.7
NUP42YDR192C MTR2P34232 184 aaKnown RBP4.45□□□□□ -1.7
NUP42YDR192C HMT1P38074 348 aa4.45□□□□□ -1.7
NUP42YDR192C ARP1P38696 384 aa4.45□□□□□ -1.7
NUP42YDR192C LEU5P38702 357 aa4.45□□□□□ -1.7
NUP42YDR192C AIM18P38884 321 aa4.45□□□□□ -1.7
NUP42YDR192C SMX2P40204 77 aaKnown RBP4.45□□□□□ -1.7
NUP42YDR192C YNL320WP42840 284 aa4.45□□□□□ -1.7
NUP42YDR192C STB2P46679 850 aa4.45□□□□□ -1.7
NUP42YDR192C URB2P47108 1174 aa4.45□□□□□ -1.7
NUP42YDR192C TAF6P53040 516 aa4.45□□□□□ -1.7
NUP42YDR192C MSC1Q03104 513 aa4.45□□□□□ -1.7
NUP42YDR192C IZH1Q03419 316 aa4.45□□□□□ -1.7
NUP42YDR192C RSF1Q05043 376 aa4.45□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 81 ms