RNA–Protein interactions for RNA: YDR164C

SEC1, Transcript of Sm-like protein involved in docking and fusion of exocytic vesicles, yeast

Gene SEC1, Length 2,175 nt, Biotype protein coding, Subcellular localisation Cellular bud .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEC1	YDR164C	PTH1	P38876	190 aa	Known RBP	0.78	□□□□□ -2.28
SEC1	YDR164C	ECM10	P39987	644 aa		0.78	□□□□□ -2.28
SEC1	YDR164C	PHM8	P40025	321 aa		0.78	□□□□□ -2.28
SEC1	YDR164C	SMX2	P40204	77 aa	Known RBP	0.78	□□□□□ -2.28
SEC1	YDR164C	PDS1	P40316	373 aa	Predicted RBP	0.78	□□□□□ -2.28
SEC1	YDR164C	YJL213W	P40896	331 aa		0.78	□□□□□ -2.28
SEC1	YDR164C	LCB2	P40970	561 aa		0.78	□□□□□ -2.28
SEC1	YDR164C	YRB1	P41920	201 aa	Known RBP	0.78	□□□□□ -2.28
SEC1	YDR164C	YFR020W	P43600	232 aa		0.78	□□□□□ -2.28
SEC1	YDR164C	FAR3	P46671	204 aa		0.78	□□□□□ -2.28
SEC1	YDR164C	PET130	P47065	347 aa		0.78	□□□□□ -2.28
SEC1	YDR164C	CPR7	P47103	393 aa		0.78	□□□□□ -2.28
SEC1	YDR164C	ASN2	P49090	572 aa	Known RBP	0.78	□□□□□ -2.28
SEC1	YDR164C	IMD4	P50094	524 aa	Known RBP	0.78	□□□□□ -2.28
SEC1	YDR164C	STR3	P53101	465 aa	Known RBP	0.78	□□□□□ -2.28
SEC1	YDR164C	LIF1	P53150	421 aa		0.78	□□□□□ -2.28
SEC1	YDR164C	YGR066C	P53242	292 aa		0.78	□□□□□ -2.28
SEC1	YDR164C	NNF2	P53253	936 aa		0.78	□□□□□ -2.28
SEC1	YDR164C	RET3	P53600	189 aa		0.78	□□□□□ -2.28
SEC1	YDR164C	BIO4	P53630	237 aa		0.78	□□□□□ -2.28
SEC1	YDR164C	TIM8	P57744	87 aa		0.78	□□□□□ -2.28
SEC1	YDR164C	MRS2	Q01926	470 aa		0.78	□□□□□ -2.28
SEC1	YDR164C	SKI8	Q02793	397 aa	Predicted RBP	0.78	□□□□□ -2.28
SEC1	YDR164C	YMR209C	Q03648	457 aa		0.78	□□□□□ -2.28
SEC1	YDR164C	TAF12	Q03761	539 aa		0.78	□□□□□ -2.28
SEC1	YDR164C	ACL4	Q03771	387 aa		0.78	□□□□□ -2.28
SEC1	YDR164C	RPN9	Q04062	393 aa	Known RBP	0.78	□□□□□ -2.28
SEC1	YDR164C	VTI1	Q04338	217 aa		0.78	□□□□□ -2.28
SEC1	YDR164C	YDR109C	Q04585	715 aa		0.78	□□□□□ -2.28
SEC1	YDR164C	AIM32	Q04689	311 aa		0.78	□□□□□ -2.28
SEC1	YDR164C	FAR8	Q05040	523 aa		0.78	□□□□□ -2.28
SEC1	YDR164C	YLR297W	Q05899	129 aa		0.78	□□□□□ -2.28
SEC1	YDR164C	ADE13	Q05911	482 aa	Known RBP	0.78	□□□□□ -2.28
SEC1	YDR164C	FAR10	Q06001	478 aa		0.78	□□□□□ -2.28
SEC1	YDR164C	STE23	Q06010	1027 aa		0.78	□□□□□ -2.28
SEC1	YDR164C	LUC7	Q07508	261 aa	Predicted RBP	0.78	□□□□□ -2.28
SEC1	YDR164C	CMS1	Q07897	291 aa	Known RBP	0.78	□□□□□ -2.28
SEC1	YDR164C	AAD15	Q08361	143 aa		0.78	□□□□□ -2.28
SEC1	YDR164C	YLR053C	Q12026	108 aa		0.78	□□□□□ -2.28
SEC1	YDR164C	RLM1	Q12224	676 aa		0.78	□□□□□ -2.28
SEC1	YDR164C	ADF1	Q2V2Q1	113 aa		0.78	□□□□□ -2.28
SEC1	YDR164C	BNI1	P41832	1953 aa		0.78	□□□□□ -2.29
SEC1	YDR164C	SNF2	P22082	1703 aa		0.78	□□□□□ -2.29
SEC1	YDR164C	GAL80	P04387	435 aa		0.77	□□□□□ -2.29
SEC1	YDR164C	CHO1	P08456	276 aa		0.77	□□□□□ -2.29
SEC1	YDR164C	PET111	P08468	800 aa		0.77	□□□□□ -2.29
SEC1	YDR164C	MAS2	P11914	482 aa		0.77	□□□□□ -2.29
SEC1	YDR164C	MRP13	P12686	339 aa		0.77	□□□□□ -2.29
SEC1	YDR164C	RPB8	P20436	146 aa		0.77	□□□□□ -2.29
SEC1	YDR164C	CKI1	P20485	582 aa		0.77	□□□□□ -2.29
SEC1	YDR164C	SLY1	P22213	666 aa		0.77	□□□□□ -2.29
SEC1	YDR164C	ELO2	P25358	347 aa		0.77	□□□□□ -2.29
SEC1	YDR164C	RRP7	P25368	297 aa	Predicted RBP	0.77	□□□□□ -2.29
SEC1	YDR164C	PUP3	P25451	205 aa	Known RBP	0.77	□□□□□ -2.29
SEC1	YDR164C	SSE2	P32590	693 aa	Known RBP	0.77	□□□□□ -2.29
SEC1	YDR164C	YEL043W	P32618	956 aa		0.77	□□□□□ -2.29
SEC1	YDR164C	SEC66	P33754	206 aa		0.77	□□□□□ -2.29
SEC1	YDR164C	PMT1	P33775	817 aa		0.77	□□□□□ -2.29
SEC1	YDR164C	YBL055C	P34220	418 aa	Predicted RBP	0.77	□□□□□ -2.29
SEC1	YDR164C	RRP1	P35178	278 aa	Predicted RBP	0.77	□□□□□ -2.29
SEC1	YDR164C	PTC1	P35182	281 aa		0.77	□□□□□ -2.29
SEC1	YDR164C	TCD2	P36101	447 aa	Known RBP	0.77	□□□□□ -2.29
SEC1	YDR164C	THI2	P38141	450 aa		0.77	□□□□□ -2.29
SEC1	YDR164C	HEK2	P38199	381 aa	Known RBP RIP-Chip data	0.77	□□□□□ -2.29	not detected
SEC1	YDR164C	PFF1	P38244	976 aa		0.77	□□□□□ -2.29
SEC1	YDR164C	SLM4	P38247	162 aa		0.77	□□□□□ -2.29
SEC1	YDR164C	SWC5	P38326	303 aa		0.77	□□□□□ -2.29
SEC1	YDR164C	POP4	P38336	279 aa		0.77	□□□□□ -2.29
SEC1	YDR164C	PHO89	P38361	574 aa		0.77	□□□□□ -2.29
SEC1	YDR164C	DIA4	P38705	446 aa	Predicted RBP	0.77	□□□□□ -2.29
SEC1	YDR164C	SEC31	P38968	1273 aa	Known RBP	0.77	□□□□□ -2.29
SEC1	YDR164C	END3	P39013	349 aa		0.77	□□□□□ -2.29
SEC1	YDR164C	NPT1	P39683	429 aa	Known RBP	0.77	□□□□□ -2.29
SEC1	YDR164C	AFG3	P39925	761 aa		0.77	□□□□□ -2.29
SEC1	YDR164C	VAB2	P40003	282 aa		0.77	□□□□□ -2.29
SEC1	YDR164C	MRX1	P40050	688 aa		0.77	□□□□□ -2.29
SEC1	YDR164C	BUR6	P40096	142 aa		0.77	□□□□□ -2.29
SEC1	YDR164C	YMR134W	P40207	237 aa		0.77	□□□□□ -2.29
SEC1	YDR164C	JEM1	P40358	645 aa		0.77	□□□□□ -2.29
SEC1	YDR164C	YIL054W	P40524	105 aa		0.77	□□□□□ -2.29
SEC1	YDR164C	LAM5	P43560	674 aa		0.77	□□□□□ -2.29
SEC1	YDR164C	SCD6	P45978	349 aa	Known RBP RIP-Chip data	0.77	□□□□□ -2.29	not detected
SEC1	YDR164C	AZR1	P50080	613 aa		0.77	□□□□□ -2.29
SEC1	YDR164C	USE1	P53146	245 aa		0.77	□□□□□ -2.29
SEC1	YDR164C	RTT102	P53330	157 aa		0.77	□□□□□ -2.29
SEC1	YDR164C	DCP2	P53550	970 aa	Known RBP	0.77	□□□□□ -2.29
SEC1	YDR164C	ALF1	P53904	254 aa		0.77	□□□□□ -2.29
SEC1	YDR164C	VAC7	P53950	1165 aa		0.77	□□□□□ -2.29
SEC1	YDR164C	YNL040W	P53960	456 aa	Predicted RBP	0.77	□□□□□ -2.29
SEC1	YDR164C	EFM6	P53970	246 aa		0.77	□□□□□ -2.29
SEC1	YDR164C	MEH1	Q02205	184 aa		0.77	□□□□□ -2.29
SEC1	YDR164C	PRP3	Q03338	469 aa	Predicted RBP	0.77	□□□□□ -2.29
SEC1	YDR164C	RSM28	Q03430	361 aa		0.77	□□□□□ -2.29
SEC1	YDR164C	YMR010W	Q03687	405 aa		0.77	□□□□□ -2.29
SEC1	YDR164C	SPG3	Q04398	127 aa	Predicted RBP	0.77	□□□□□ -2.29
SEC1	YDR164C	ROY1	Q04847	553 aa		0.77	□□□□□ -2.29
SEC1	YDR164C	RQC1	Q05468	723 aa	Known RBP	0.77	□□□□□ -2.29
SEC1	YDR164C	YDR286C	Q05530	114 aa		0.77	□□□□□ -2.29
SEC1	YDR164C	RBS1	Q05672	457 aa	Known RBP	0.77	□□□□□ -2.29
SEC1	YDR164C	ATG26	Q06321	1198 aa		0.77	□□□□□ -2.29

Retrieved 100 of 5,963 RNA–protein pairs in 15.4 ms