RNA–Protein interactions for RNA: YDR079C-A

TFB5, Transcript of Component of RNA polymerase II general transcription factor TFIIH, yeastyeast

Gene TFB5, Length 219 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TFB5YDR079C-A LCL2Q08045 131 aa-0.15□□□□□ -2.43
TFB5YDR079C-A PLB3Q08108 686 aa-0.15□□□□□ -2.43
TFB5YDR079C-A CUE5Q08412 411 aaKnown RBP-0.15□□□□□ -2.43
TFB5YDR079C-A UIP4Q08926 304 aa-0.15□□□□□ -2.43
TFB5YDR079C-A SAM4Q08985 325 aaKnown RBP-0.15□□□□□ -2.43
TFB5YDR079C-A YPR202WQ08993 238 aa-0.15□□□□□ -2.43
TFB5YDR079C-A REX3Q12090 404 aa-0.15□□□□□ -2.43
TFB5YDR079C-A ATG9Q12142 997 aa-0.15□□□□□ -2.43
TFB5YDR079C-A RAX2Q12465 1220 aa-0.15□□□□□ -2.43
TFB5YDR079C-A DFM1Q12743 341 aaKnown RBP-0.15□□□□□ -2.43
TFB5YDR079C-A TY2B-DR3Q07791 1770 aaKnown RBP-0.15□□□□□ -2.43
TFB5YDR079C-A FLO9P39712 1322 aa-0.15□□□□□ -2.43
TFB5YDR079C-A SAC3P46674 1301 aa-0.15□□□□□ -2.43
TFB5YDR079C-A RPO41P13433 1351 aaKnown RBP-0.16□□□□□ -2.43
TFB5YDR079C-A HXK2P04807 486 aaKnown RBP-0.16□□□□□ -2.44
TFB5YDR079C-A MET17P06106 444 aa-0.16□□□□□ -2.44
TFB5YDR079C-A CDC21P06785 304 aa-0.16□□□□□ -2.44
TFB5YDR079C-A ATP1P07251 545 aaKnown RBP-0.16□□□□□ -2.44
TFB5YDR079C-A BCY1P07278 416 aaKnown RBP-0.16□□□□□ -2.44
TFB5YDR079C-A VAS1P07806 1104 aaKnown RBP-0.16□□□□□ -2.44
TFB5YDR079C-A SGA1P08019 549 aa-0.16□□□□□ -2.44
TFB5YDR079C-A MAS1P10507 462 aa-0.16□□□□□ -2.44
TFB5YDR079C-A SNF3P10870 884 aa-0.16□□□□□ -2.44
TFB5YDR079C-A SCL1P21243 252 aaKnown RBP-0.16□□□□□ -2.44
TFB5YDR079C-A OSM1P21375 501 aaKnown RBP-0.16□□□□□ -2.44
TFB5YDR079C-A RPI1P23250 407 aaKnown RBP-0.16□□□□□ -2.44
TFB5YDR079C-A RNA15P25299 296 aaPredicted RBP-0.16□□□□□ -2.44
TFB5YDR079C-A CHA1P25379 360 aaKnown RBP-0.16□□□□□ -2.44
TFB5YDR079C-A RPC53P25441 422 aa-0.16□□□□□ -2.44
TFB5YDR079C-A PGS1P25578 521 aa-0.16□□□□□ -2.44
TFB5YDR079C-A CRM1P30822 1084 aaKnown RBP-0.16□□□□□ -2.44
TFB5YDR079C-A SSH4P32343 579 aa-0.16□□□□□ -2.44
TFB5YDR079C-A VPH1P32563 840 aaKnown RBP-0.16□□□□□ -2.44
TFB5YDR079C-A XRS2P33301 854 aa-0.16□□□□□ -2.44
TFB5YDR079C-A TFC4P33339 1025 aa-0.16□□□□□ -2.44
TFB5YDR079C-A SOF1P33750 489 aaKnown RBP-0.16□□□□□ -2.44
TFB5YDR079C-A MRPS5P33759 307 aa-0.16□□□□□ -2.44
TFB5YDR079C-A SAS3P34218 831 aa-0.16□□□□□ -2.44
TFB5YDR079C-A SHP1P34223 423 aa-0.16□□□□□ -2.44
TFB5YDR079C-A YKL063CP35725 167 aa-0.16□□□□□ -2.44
TFB5YDR079C-A AAP1P37898 856 aaKnown RBP-0.16□□□□□ -2.44
TFB5YDR079C-A PCH2P38126 564 aa-0.16□□□□□ -2.44
TFB5YDR079C-A YBR225WP38321 900 aa-0.16□□□□□ -2.44
TFB5YDR079C-A PRS3P38689 320 aaKnown RBP-0.16□□□□□ -2.44
TFB5YDR079C-A ANS1P38832 159 aa-0.16□□□□□ -2.44
TFB5YDR079C-A YNL200CP40165 246 aaKnown RBP-0.16□□□□□ -2.44
TFB5YDR079C-A HUA1P40325 198 aa-0.16□□□□□ -2.44
TFB5YDR079C-A ESL1P40456 1118 aa-0.16□□□□□ -2.44
TFB5YDR079C-A GAB1P41733 394 aa-0.16□□□□□ -2.44
TFB5YDR079C-A AGP3P43548 558 aa-0.16□□□□□ -2.44
TFB5YDR079C-A BUD27P43573 796 aaKnown RBP RIP-Chip data-0.16□□□□□ -2.44not detected
TFB5YDR079C-A DLD2P46681 530 aaKnown RBP-0.16□□□□□ -2.44
TFB5YDR079C-A GLG2P47011 380 aa-0.16□□□□□ -2.44
TFB5YDR079C-A PGU1P47180 361 aa-0.16□□□□□ -2.44
TFB5YDR079C-A BRO1P48582 844 aa-0.16□□□□□ -2.44
TFB5YDR079C-A SBH2P52871 88 aa-0.16□□□□□ -2.44
TFB5YDR079C-A PEX14P53112 341 aa-0.16□□□□□ -2.44
TFB5YDR079C-A YGR017WP53210 297 aa-0.16□□□□□ -2.44
TFB5YDR079C-A YGR126WP53274 230 aa-0.16□□□□□ -2.44
TFB5YDR079C-A SLD5Q03406 294 aa-0.16□□□□□ -2.44
TFB5YDR079C-A TRS130Q03660 1102 aa-0.16□□□□□ -2.44
TFB5YDR079C-A ARX1Q03862 593 aaKnown RBP-0.16□□□□□ -2.44
TFB5YDR079C-A TAF7Q05021 590 aa-0.16□□□□□ -2.44
TFB5YDR079C-A MRPL51Q06090 140 aaPredicted RBP-0.16□□□□□ -2.44
TFB5YDR079C-A YLR446WQ06204 433 aa-0.16□□□□□ -2.44
TFB5YDR079C-A YPR195CQ06594 109 aa-0.16□□□□□ -2.44
TFB5YDR079C-A BRE1Q07457 700 aaKnown RBP-0.16□□□□□ -2.44
TFB5YDR079C-A PLP2Q12017 286 aa-0.16□□□□□ -2.44
TFB5YDR079C-A RIM20Q12033 661 aa-0.16□□□□□ -2.44
TFB5YDR079C-A SLF1Q12034 447 aaKnown RBP-0.16□□□□□ -2.44
TFB5YDR079C-A SRO7Q12038 1033 aa-0.16□□□□□ -2.44
TFB5YDR079C-A SGT2Q12118 346 aaKnown RBP-0.16□□□□□ -2.44
TFB5YDR079C-A PSY3Q12318 242 aa-0.16□□□□□ -2.44
TFB5YDR079C-A ERP3Q12403 225 aa-0.16□□□□□ -2.44
TFB5YDR079C-A YOR343CQ12484 108 aa-0.16□□□□□ -2.44
TFB5YDR079C-A DET1Q99288 334 aaKnown RBP-0.16□□□□□ -2.44
TFB5YDR079C-A RPO21P04050 1733 aaKnown RBP-0.16□□□□□ -2.44
TFB5YDR079C-A SSK22P25390 1331 aaPredicted RBP-0.16□□□□□ -2.44
TFB5YDR079C-A NUP188P52593 1655 aaKnown RBP-0.17□□□□□ -2.44
TFB5YDR079C-A FOB1O13329 566 aa-0.17□□□□□ -2.44
TFB5YDR079C-A TDH3P00359 332 aaKnown RBP RIP-Chip data-0.17□□□□□ -2.44not detected
TFB5YDR079C-A ADE4P04046 510 aaKnown RBP-0.17□□□□□ -2.44
TFB5YDR079C-A RAD52P06778 471 aaKnown RBP-0.17□□□□□ -2.44
TFB5YDR079C-A RAD10P06838 210 aa-0.17□□□□□ -2.44
TFB5YDR079C-A RAD3P06839 778 aa-0.17□□□□□ -2.44
TFB5YDR079C-A PIF1P07271 859 aa-0.17□□□□□ -2.44
TFB5YDR079C-A MET2P08465 486 aa-0.17□□□□□ -2.44
TFB5YDR079C-A CDC16P09798 840 aa-0.17□□□□□ -2.44
TFB5YDR079C-A YHR212W-AP0CX91 67 aa-0.17□□□□□ -2.44
TFB5YDR079C-A MSS116P15424 664 aaKnown RBP-0.17□□□□□ -2.44
TFB5YDR079C-A EST1P17214 699 aaPredicted RBP-0.17□□□□□ -2.44
TFB5YDR079C-A ANB1P19211 157 aa-0.17□□□□□ -2.44
TFB5YDR079C-A CLN1P20437 546 aa-0.17□□□□□ -2.44
TFB5YDR079C-A KGD1P20967 1014 aaKnown RBP-0.17□□□□□ -2.44
TFB5YDR079C-A PWP1P21304 576 aaKnown RBP-0.17□□□□□ -2.44
TFB5YDR079C-A UTR1P21373 530 aa-0.17□□□□□ -2.44
TFB5YDR079C-A YSR3P23501 404 aa-0.17□□□□□ -2.44
TFB5YDR079C-A PPH21P23594 369 aa-0.17□□□□□ -2.44
TFB5YDR079C-A ROX1P25042 368 aa-0.17□□□□□ -2.44
TFB5YDR079C-A IMG1P25626 169 aa-0.17□□□□□ -2.44
Retrieved 100 of 5,963 RNA–protein pairs in 19 ms