RNA–Protein interactions for RNA: YCL005W

LDB16, Transcript of Protein of unknown function, yeastyeast

Gene LDB16, Length 771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LDB16YCL005W SPC34P36131 295 aa6.13□□□□□ -1.43
LDB16YCL005W CBP4P37267 147 aa6.13□□□□□ -1.43
LDB16YCL005W DED81P38707 554 aaKnown RBP6.13□□□□□ -1.43
LDB16YCL005W FMO1P38866 432 aa6.13□□□□□ -1.43
LDB16YCL005W AXL2P38928 823 aa6.13□□□□□ -1.43
LDB16YCL005W MNN9P39107 395 aaKnown RBP6.13□□□□□ -1.43
LDB16YCL005W ELP2P42935 788 aa6.13□□□□□ -1.43
LDB16YCL005W YFR020WP43600 232 aa6.13□□□□□ -1.43
LDB16YCL005W TOM22P49334 152 aa6.13□□□□□ -1.43
LDB16YCL005W YPL071CQ02864 156 aa6.13□□□□□ -1.43
LDB16YCL005W ROT1Q03691 256 aa6.13□□□□□ -1.43
LDB16YCL005W MUS81Q04149 632 aaPredicted RBP6.13□□□□□ -1.43
LDB16YCL005W MLH3Q12083 715 aa6.13□□□□□ -1.43
LDB16YCL005W PFK27Q12471 397 aaPredicted RBP6.13□□□□□ -1.43
LDB16YCL005W NKP1Q12493 238 aa6.13□□□□□ -1.43
LDB16YCL005W MHF2Q3E829 80 aa6.13□□□□□ -1.43
LDB16YCL005W MEX67Q99257 599 aaKnown RBP6.13□□□□□ -1.43
LDB16YCL005W LEU4P06208 619 aaKnown RBP6.12□□□□□ -1.43
LDB16YCL005W TY2A-LR1P0C2J4 438 aa6.12□□□□□ -1.43
LDB16YCL005W TY2A-FP0CX61 438 aa6.12□□□□□ -1.43
LDB16YCL005W TY2A-GR2P0CX62 438 aa6.12□□□□□ -1.43
LDB16YCL005W LAT1P12695 482 aaKnown RBP6.12□□□□□ -1.43
LDB16YCL005W FBA1P14540 359 aaKnown RBP6.12□□□□□ -1.43
LDB16YCL005W SCL1P21243 252 aaKnown RBP6.12□□□□□ -1.43
LDB16YCL005W TY2A-CP25383 438 aa6.12□□□□□ -1.43
LDB16YCL005W PET127P32606 800 aa6.12□□□□□ -1.43
LDB16YCL005W CAT2P32796 670 aaKnown RBP6.12□□□□□ -1.43
LDB16YCL005W YME2P32843 850 aa6.12□□□□□ -1.43
LDB16YCL005W KKQ8P36004 724 aa6.12□□□□□ -1.43
LDB16YCL005W TRM7P38238 310 aaKnown RBP6.12□□□□□ -1.43
LDB16YCL005W RCK1P38622 512 aa6.12□□□□□ -1.43
LDB16YCL005W TDA11P38854 504 aa6.12□□□□□ -1.43
LDB16YCL005W ERV46P39727 415 aa6.12□□□□□ -1.43
LDB16YCL005W THO1P40040 218 aaKnown RBP6.12□□□□□ -1.43
LDB16YCL005W APQ12P40532 138 aa6.12□□□□□ -1.43
LDB16YCL005W TY4A-JP47023 414 aa6.12□□□□□ -1.43
LDB16YCL005W MUP1P50276 574 aa6.12□□□□□ -1.43
LDB16YCL005W SGF73P53165 657 aa6.12□□□□□ -1.43
LDB16YCL005W SLH1P53327 1967 aaKnown RBP6.12□□□□□ -1.43
LDB16YCL005W SPO19Q03029 223 aa6.12□□□□□ -1.43
LDB16YCL005W TY2A-DR2Q03483 438 aa6.12□□□□□ -1.43
LDB16YCL005W YDR239CQ03780 787 aa6.12□□□□□ -1.43
LDB16YCL005W GAD1Q04792 585 aa6.12□□□□□ -1.43
LDB16YCL005W HAL9Q12180 1030 aa6.12□□□□□ -1.43
LDB16YCL005W TY2A-BQ12260 438 aa6.12□□□□□ -1.43
LDB16YCL005W TY2A-OR2Q12293 438 aa6.12□□□□□ -1.43
LDB16YCL005W GPR1Q12361 961 aa6.12□□□□□ -1.43
LDB16YCL005W TY2A-DR1Q12392 438 aa6.12□□□□□ -1.43
LDB16YCL005W TY2A-OR1Q12439 438 aa6.12□□□□□ -1.43
LDB16YCL005W YOL159C-AQ3E769 90 aa6.12□□□□□ -1.43
LDB16YCL005W MDM12Q92328 271 aa6.12□□□□□ -1.43
LDB16YCL005W TY2A-DR3Q99303 438 aa6.12□□□□□ -1.43
LDB16YCL005W YPR096CO13587 100 aa6.11□□□□□ -1.43
LDB16YCL005W RPL11AP0C0W9 174 aaKnown RBP6.11□□□□□ -1.43
LDB16YCL005W KIN2P13186 1147 aaKnown RBP6.11□□□□□ -1.43
LDB16YCL005W YAP1P19880 650 aaKnown RBP6.11□□□□□ -1.43
LDB16YCL005W SLM5P25345 492 aaKnown RBP6.11□□□□□ -1.43
LDB16YCL005W VPH2P32341 215 aa6.11□□□□□ -1.43
LDB16YCL005W ARP2P32381 391 aaKnown RBP6.11□□□□□ -1.43
LDB16YCL005W APE2P32454 952 aaKnown RBP6.11□□□□□ -1.43
LDB16YCL005W NUP2P32499 720 aa6.11□□□□□ -1.43
LDB16YCL005W PET309P32522 965 aaPredicted RBP6.11□□□□□ -1.43
LDB16YCL005W NTR2P36118 322 aaPredicted RBP6.11□□□□□ -1.43
LDB16YCL005W KAE1P36132 386 aa6.11□□□□□ -1.43
LDB16YCL005W MRPL37P36532 105 aa6.11□□□□□ -1.43
LDB16YCL005W RRN10P38204 145 aa6.11□□□□□ -1.43
LDB16YCL005W CCZ1P38273 704 aa6.11□□□□□ -1.43
LDB16YCL005W RSP5P39940 809 aaKnown RBP6.11□□□□□ -1.43
LDB16YCL005W MAD2P40958 196 aa6.11□□□□□ -1.43
LDB16YCL005W AZF1P41696 914 aa6.11□□□□□ -1.43
LDB16YCL005W BNA3P47039 444 aaKnown RBP6.11□□□□□ -1.43
LDB16YCL005W SDT1P53078 280 aa6.11□□□□□ -1.43
LDB16YCL005W DCP2P53550 970 aaKnown RBP6.11□□□□□ -1.43
LDB16YCL005W SWF1Q04629 336 aa6.11□□□□□ -1.43
LDB16YCL005W ATG38Q05789 226 aaKnown RBP6.11□□□□□ -1.43
LDB16YCL005W EAF1Q06337 982 aa6.11□□□□□ -1.43
LDB16YCL005W ATG17Q06410 417 aa6.11□□□□□ -1.43
LDB16YCL005W LOT6Q07923 191 aa6.11□□□□□ -1.43
LDB16YCL005W THP1Q08231 455 aa6.11□□□□□ -1.43
LDB16YCL005W MCA1Q08601 432 aa6.11□□□□□ -1.43
LDB16YCL005W RSA1Q08932 381 aa6.11□□□□□ -1.43
LDB16YCL005W VIK1Q12045 647 aa6.11□□□□□ -1.43
LDB16YCL005W RPL11BQ3E757 174 aaPredicted RBP6.11□□□□□ -1.43
LDB16YCL005W HRP1Q99383 534 aaKnown RBP6.11□□□□□ -1.43
LDB16YCL005W GPH1P06738 902 aaKnown RBP6.1□□□□□ -1.43
LDB16YCL005W GAL3P13045 520 aa6.1□□□□□ -1.43
LDB16YCL005W HOM2P13663 365 aaKnown RBP6.1□□□□□ -1.43
LDB16YCL005W FAR1P21268 830 aa6.1□□□□□ -1.43
LDB16YCL005W POL4P25615 582 aa6.1□□□□□ -1.43
LDB16YCL005W NTG1P31378 399 aa6.1□□□□□ -1.43
LDB16YCL005W MEI5P32489 222 aa6.1□□□□□ -1.43
LDB16YCL005W RIB1P38066 345 aa6.1□□□□□ -1.43
LDB16YCL005W BAP2P38084 609 aa6.1□□□□□ -1.43
LDB16YCL005W BAT1P38891 393 aaKnown RBP6.1□□□□□ -1.43
LDB16YCL005W MBP1P39678 833 aa6.1□□□□□ -1.43
LDB16YCL005W SWD1P39706 426 aa6.1□□□□□ -1.43
LDB16YCL005W MNT3P40549 630 aa6.1□□□□□ -1.43
LDB16YCL005W ARF3P40994 183 aaRIP-Chip data6.1□□□□□ -1.43not detected
LDB16YCL005W SSU1P41930 458 aa6.1□□□□□ -1.43
LDB16YCL005W ATP22P50273 684 aaPredicted RBP6.1□□□□□ -1.43
Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms