RNA–Protein interactions for RNA: YBR272C

HSM3, Transcript of Proteasome-interacting protein, yeast

Gene HSM3, Length 1,443 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HSM3	YBR272C	ATG7	P38862	630 aa		6.55	□□□□□ -1.36
HSM3	YBR272C	UIP3	P39547	235 aa		6.55	□□□□□ -1.36
HSM3	YBR272C	GIP2	P40036	548 aa		6.55	□□□□□ -1.36
HSM3	YBR272C	YER085C	P40058	173 aa		6.55	□□□□□ -1.36
HSM3	YBR272C	LSM4	P40070	187 aa	Known RBP	6.55	□□□□□ -1.36
HSM3	YBR272C	UBP7	P40453	1071 aa		6.55	□□□□□ -1.36
HSM3	YBR272C	EFM4	P40516	257 aa		6.55	□□□□□ -1.36
HSM3	YBR272C	SLS1	P42900	643 aa		6.55	□□□□□ -1.36
HSM3	YBR272C	OTU1	P43558	301 aa		6.55	□□□□□ -1.36
HSM3	YBR272C	DUO1	P53168	247 aa	Known RBP	6.55	□□□□□ -1.36
HSM3	YBR272C	MPP6	P53725	186 aa	Predicted RBP	6.55	□□□□□ -1.36
HSM3	YBR272C	BUD17	P53727	317 aa		6.55	□□□□□ -1.36
HSM3	YBR272C	YNR065C	P53751	1116 aa		6.55	□□□□□ -1.36
HSM3	YBR272C	ERG5	P54781	538 aa		6.55	□□□□□ -1.36
HSM3	YBR272C	ALO1	P54783	526 aa	Known RBP	6.55	□□□□□ -1.36
HSM3	YBR272C	TIM44	Q01852	431 aa		6.55	□□□□□ -1.36
HSM3	YBR272C	MRPL13	Q02204	264 aa		6.55	□□□□□ -1.36
HSM3	YBR272C	NUP116	Q02630	1113 aa		6.55	□□□□□ -1.36
HSM3	YBR272C	ECM23	Q02710	187 aa		6.55	□□□□□ -1.36
HSM3	YBR272C	MSC1	Q03104	513 aa		6.55	□□□□□ -1.36
HSM3	YBR272C	ATC1	Q04005	294 aa		6.55	□□□□□ -1.36
HSM3	YBR272C	YDR306C	Q06640	478 aa		6.55	□□□□□ -1.36
HSM3	YBR272C	IMA2	Q08295	589 aa		6.55	□□□□□ -1.36
HSM3	YBR272C	TGL5	Q12043	749 aa		6.55	□□□□□ -1.36
HSM3	YBR272C	SNF8	Q12483	233 aa		6.55	□□□□□ -1.36
HSM3	YBR272C	DUR1,2	P32528	1835 aa	Known RBP	6.54	□□□□□ -1.36
HSM3	YBR272C	COQ1	P18900	473 aa		6.54	□□□□□ -1.36
HSM3	YBR272C	CDC50	P25656	391 aa		6.54	□□□□□ -1.36
HSM3	YBR272C	GPI10	P30777	616 aa		6.54	□□□□□ -1.36
HSM3	YBR272C	DEG1	P31115	442 aa	Known RBP	6.54	□□□□□ -1.36
HSM3	YBR272C	NGG1	P32494	702 aa		6.54	□□□□□ -1.36
HSM3	YBR272C	RPT3	P33298	428 aa	Known RBP	6.54	□□□□□ -1.36
HSM3	YBR272C	PGM1	P33401	570 aa	Known RBP	6.54	□□□□□ -1.36
HSM3	YBR272C	HES1	P35843	434 aa		6.54	□□□□□ -1.36
HSM3	YBR272C	YCR087C-A	P37263	153 aa		6.54	□□□□□ -1.36
HSM3	YBR272C	SLM4	P38247	162 aa		6.54	□□□□□ -1.36
HSM3	YBR272C	LEU5	P38702	357 aa		6.54	□□□□□ -1.36
HSM3	YBR272C	LSM5	P40089	93 aa	Known RBP	6.54	□□□□□ -1.36
HSM3	YBR272C	PFK26	P40433	827 aa	Known RBP	6.54	□□□□□ -1.36
HSM3	YBR272C	YIR035C	P40579	254 aa		6.54	□□□□□ -1.36
HSM3	YBR272C	OPT1	P40897	799 aa		6.54	□□□□□ -1.36
HSM3	YBR272C	SER2	P42941	309 aa		6.54	□□□□□ -1.36
HSM3	YBR272C	ADO1	P47143	340 aa	Known RBP	6.54	□□□□□ -1.36
HSM3	YBR272C	PKP2	P53170	491 aa		6.54	□□□□□ -1.36
HSM3	YBR272C	CPR6	P53691	371 aa	Known RBP	6.54	□□□□□ -1.36
HSM3	YBR272C	REG1	Q00816	1014 aa		6.54	□□□□□ -1.36
HSM3	YBR272C	TRS31	Q03337	283 aa		6.54	□□□□□ -1.36
HSM3	YBR272C	SNU56	Q03782	492 aa	Known RBP	6.54	□□□□□ -1.36
HSM3	YBR272C	THI22	Q06490	572 aa		6.54	□□□□□ -1.36
HSM3	YBR272C	YNG1	Q08465	219 aa		6.54	□□□□□ -1.36
HSM3	YBR272C	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	6.54	□□□□□ -1.36	not detected
HSM3	YBR272C	SUL2	Q12325	893 aa		6.54	□□□□□ -1.36
HSM3	YBR272C	ATP14	Q12349	124 aa		6.54	□□□□□ -1.36
HSM3	YBR272C	PDH1	Q12428	516 aa	Known RBP	6.54	□□□□□ -1.36
HSM3	YBR272C	TRM11	Q12463	433 aa		6.54	□□□□□ -1.36
HSM3	YBR272C	TSC13	Q99190	310 aa		6.54	□□□□□ -1.36
HSM3	YBR272C	AFI1	Q99222	893 aa		6.54	□□□□□ -1.36
HSM3	YBR272C	ATP1	P07251	545 aa	Known RBP	6.53	□□□□□ -1.36
HSM3	YBR272C	CBS1	P14066	229 aa		6.53	□□□□□ -1.36
HSM3	YBR272C	RNA14	P25298	677 aa	Known RBP	6.53	□□□□□ -1.36
HSM3	YBR272C	BUD5	P25300	642 aa	Predicted RBP	6.53	□□□□□ -1.36
HSM3	YBR272C	PRE4	P30657	266 aa		6.53	□□□□□ -1.36
HSM3	YBR272C	PRO3	P32263	286 aa	Known RBP	6.53	□□□□□ -1.36
HSM3	YBR272C	SFP1	P32432	683 aa		6.53	□□□□□ -1.36
HSM3	YBR272C	FAT1	P38225	669 aa		6.53	□□□□□ -1.36
HSM3	YBR272C	FMP23	P38231	175 aa		6.53	□□□□□ -1.36
HSM3	YBR272C	YBR071W	P38243	211 aa		6.53	□□□□□ -1.36
HSM3	YBR272C	PRE3	P38624	215 aa		6.53	□□□□□ -1.36
HSM3	YBR272C	GOS1	P38736	223 aa		6.53	□□□□□ -1.36
HSM3	YBR272C	ACA1	P39970	489 aa		6.53	□□□□□ -1.36
HSM3	YBR272C	PHM8	P40025	321 aa		6.53	□□□□□ -1.36
HSM3	YBR272C	DIM1	P41819	318 aa	Known RBP	6.53	□□□□□ -1.36
HSM3	YBR272C	THI6	P41835	540 aa		6.53	□□□□□ -1.36
HSM3	YBR272C	YJR030C	P47101	745 aa		6.53	□□□□□ -1.36
HSM3	YBR272C	YAE1	P47118	141 aa	Predicted RBP	6.53	□□□□□ -1.36
HSM3	YBR272C	EMC2	P47133	292 aa	Known RBP	6.53	□□□□□ -1.36
HSM3	YBR272C	MRK1	P50873	501 aa		6.53	□□□□□ -1.36
HSM3	YBR272C	YGL159W	P53110	370 aa		6.53	□□□□□ -1.36
HSM3	YBR272C	COG5	P53951	403 aa		6.53	□□□□□ -1.36
HSM3	YBR272C	ELP4	Q02884	456 aa	Known RBP	6.53	□□□□□ -1.36
HSM3	YBR272C	UGO1	Q03327	502 aa		6.53	□□□□□ -1.36
HSM3	YBR272C	YDR109C	Q04585	715 aa		6.53	□□□□□ -1.36
HSM3	YBR272C	ROY1	Q04847	553 aa		6.53	□□□□□ -1.36
HSM3	YBR272C	RSF1	Q05043	376 aa		6.53	□□□□□ -1.36
HSM3	YBR272C	MSC3	Q05812	728 aa		6.53	□□□□□ -1.36
HSM3	YBR272C	ADY4	Q05955	493 aa		6.53	□□□□□ -1.36
HSM3	YBR272C	HDA2	Q06629	674 aa		6.53	□□□□□ -1.36
HSM3	YBR272C	FRA1	Q07825	749 aa		6.53	□□□□□ -1.36
HSM3	YBR272C	CWC2	Q12046	339 aa	Predicted RBP	6.53	□□□□□ -1.36
HSM3	YBR272C	SFM1	Q12314	213 aa		6.53	□□□□□ -1.36
HSM3	YBR272C	GRX2	P17695	143 aa	Known RBP	6.52	□□□□□ -1.37
HSM3	YBR272C	MET16	P18408	261 aa	Predicted RBP	6.52	□□□□□ -1.37
HSM3	YBR272C	SNF6	P18888	332 aa		6.52	□□□□□ -1.37
HSM3	YBR272C	PRE1	P22141	198 aa	Known RBP	6.52	□□□□□ -1.37
HSM3	YBR272C	CSM1	P25651	190 aa		6.52	□□□□□ -1.37
HSM3	YBR272C	URA7	P28274	579 aa	Known RBP	6.52	□□□□□ -1.37
HSM3	YBR272C	SPT23	P35210	1082 aa		6.52	□□□□□ -1.37
HSM3	YBR272C	SRO77	P38163	1010 aa		6.52	□□□□□ -1.37
HSM3	YBR272C	APN2	P38207	520 aa		6.52	□□□□□ -1.37
HSM3	YBR272C	ECM2	P38241	364 aa	Known RBP	6.52	□□□□□ -1.37

Retrieved 100 of 5,963 RNA–protein pairs in 24.8 ms