RNA–Protein interactions for RNA: ENST00000641272.1

PHGDH-213, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-213ENST00000641272 PSTPIP2Q9H939 334 aa19.2■□□□□ 0.66
PHGDH-213ENST00000641272 SLC12A7Q9Y666 1083 aa19.2■□□□□ 0.66
PHGDH-213ENST00000641272 UPP2O95045 317 aa19.19■□□□□ 0.66
PHGDH-213ENST00000641272 CALM1P0DP23 149 aa19.19■□□□□ 0.66
PHGDH-213ENST00000641272 CALM2P0DP24 149 aa19.19■□□□□ 0.66
PHGDH-213ENST00000641272 CALM3P0DP25 149 aa19.19■□□□□ 0.66
PHGDH-213ENST00000641272 KCNA2P16389 499 aa19.19■□□□□ 0.66
PHGDH-213ENST00000641272 ITGB5P18084 799 aa19.19■□□□□ 0.66
PHGDH-213ENST00000641272 FBXO22Q8NEZ5 403 aa19.19■□□□□ 0.66
PHGDH-213ENST00000641272 PGBD1Q96JS3 809 aa19.19■□□□□ 0.66
PHGDH-213ENST00000641272 MTA3Q9BTC8 594 aa19.19■□□□□ 0.66
PHGDH-213ENST00000641272 BRWD1Q9NSI6 2320 aa19.19■□□□□ 0.66
PHGDH-213ENST00000641272 ATG2AQ2TAZ0 1938 aa19.19■□□□□ 0.66
PHGDH-213ENST00000641272 CNTNAP5Q8WYK1 1306 aa19.19■□□□□ 0.66
PHGDH-213ENST00000641272 NCOR1O75376 2440 aa19.18■□□□□ 0.66
PHGDH-213ENST00000641272 SPDYE3A6NKU9 549 aa19.18■□□□□ 0.66
PHGDH-213ENST00000641272 LIFRP42702 1097 aa19.18■□□□□ 0.66
PHGDH-213ENST00000641272 XRRA1Q6P2D8 792 aa19.18■□□□□ 0.66
PHGDH-213ENST00000641272 HLA-CQ95604 372 aa19.18■□□□□ 0.66
PHGDH-213ENST00000641272 GPRASP2Q96D09 838 aa19.18■□□□□ 0.66
PHGDH-213ENST00000641272 ZBTB10Q96DT7 871 aa19.18■□□□□ 0.66
PHGDH-213ENST00000641272 YME1L1Q96TA2 773 aa19.18■□□□□ 0.66
PHGDH-213ENST00000641272 COG5Q9UP83 839 aa19.18■□□□□ 0.66
PHGDH-213ENST00000641272 INSL6Q9Y581 213 aa19.18■□□□□ 0.66
PHGDH-213ENST00000641272 RALGAPA2Q2PPJ7 1873 aa19.18■□□□□ 0.66
PHGDH-213ENST00000641272 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.17■□□□□ 0.66
PHGDH-213ENST00000641272 CAND2O75155 1236 aa19.17■□□□□ 0.66
PHGDH-213ENST00000641272 GHRP10912 638 aa19.17■□□□□ 0.66
PHGDH-213ENST00000641272 GNAT1P11488 350 aa19.17■□□□□ 0.66
PHGDH-213ENST00000641272 COL9A1P20849 921 aa19.17■□□□□ 0.66
PHGDH-213ENST00000641272 SMARCA1P28370 1054 aa19.17■□□□□ 0.66
PHGDH-213ENST00000641272 PPFIA1Q13136 1202 aa19.17■□□□□ 0.66
PHGDH-213ENST00000641272 MTMR1Q13613 665 aa19.17■□□□□ 0.66
PHGDH-213ENST00000641272 NECTIN1Q15223 517 aa19.17■□□□□ 0.66
PHGDH-213ENST00000641272 WWC2Q6AWC2 1192 aa19.17■□□□□ 0.66
PHGDH-213ENST00000641272 SENP7Q9BQF6 1050 aa19.17■□□□□ 0.66
PHGDH-213ENST00000641272 IFIH1Q9BYX4 1025 aaKnown RBP19.17■□□□□ 0.66
PHGDH-213ENST00000641272 PCDHA6Q9UN73 950 aa19.17■□□□□ 0.66
PHGDH-213ENST00000641272 PCDHA8Q9Y5H6 950 aa19.17■□□□□ 0.66
PHGDH-213ENST00000641272 GSTTP1A0A1W2PQM5 241 aa19.16■□□□□ 0.66
PHGDH-213ENST00000641272 IGBP1P78318 339 aa19.16■□□□□ 0.66
PHGDH-213ENST00000641272 ADAM17P78536 824 aa19.16■□□□□ 0.66
PHGDH-213ENST00000641272 HTRA4P83105 476 aaPredicted RBP19.16■□□□□ 0.66
PHGDH-213ENST00000641272 TYW1BQ6NUM6 668 aa19.16■□□□□ 0.66
PHGDH-213ENST00000641272 TMTC2Q8N394 836 aa19.16■□□□□ 0.66
PHGDH-213ENST00000641272 FANCBQ8NB91 859 aa19.16■□□□□ 0.66
PHGDH-213ENST00000641272 SP7Q8TDD2 431 aaPredicted RBP19.16■□□□□ 0.66
PHGDH-213ENST00000641272 UBIAD1Q9Y5Z9 338 aa19.16■□□□□ 0.66
PHGDH-213ENST00000641272 COL4A6Q14031 1691 aa19.16■□□□□ 0.66
PHGDH-213ENST00000641272 NAPAP54920 295 aa19.15■□□□□ 0.66
PHGDH-213ENST00000641272 GRIK4Q16099 956 aa19.15■□□□□ 0.66
PHGDH-213ENST00000641272 APOA5Q6Q788 366 aa19.15■□□□□ 0.66
PHGDH-213ENST00000641272 GLG1Q92896 1179 aa19.15■□□□□ 0.66
PHGDH-213ENST00000641272 CDHR1Q96JP9 859 aa19.15■□□□□ 0.66
PHGDH-213ENST00000641272 TUBE1Q9UJT0 475 aa19.15■□□□□ 0.66
PHGDH-213ENST00000641272 KIAA1671Q9BY89 1806 aa19.14■□□□□ 0.65
PHGDH-213ENST00000641272 BDP1A6H8Y1 2624 aa19.14■□□□□ 0.65
PHGDH-213ENST00000641272 LOXHD1Q8IVV2 1947 aa19.14■□□□□ 0.65
PHGDH-213ENST00000641272 CSPG5O95196 566 aa19.14■□□□□ 0.65
PHGDH-213ENST00000641272 SGMS1Q86VZ5 419 aa19.14■□□□□ 0.65
PHGDH-213ENST00000641272 GIMAP8Q8ND71 665 aaPredicted RBP19.14■□□□□ 0.65
PHGDH-213ENST00000641272 SEPT1Q8WYJ6 367 aa19.14■□□□□ 0.65
PHGDH-213ENST00000641272 FAM49AQ9H0Q0 323 aaPredicted RBP19.14■□□□□ 0.65
PHGDH-213ENST00000641272 UBE2ZQ9H832 354 aaPredicted RBP19.14■□□□□ 0.65
PHGDH-213ENST00000641272 BRPF3Q9ULD4 1205 aa19.14■□□□□ 0.65
PHGDH-213ENST00000641272 NRCAMQ92823 1304 aa19.14■□□□□ 0.65
PHGDH-213ENST00000641272 CHRNA1P02708 482 aa19.13■□□□□ 0.65
PHGDH-213ENST00000641272 MGAT3Q09327 533 aa19.13■□□□□ 0.65
PHGDH-213ENST00000641272 RTN1Q16799 776 aa19.13■□□□□ 0.65
PHGDH-213ENST00000641272 ADCK5Q3MIX3 580 aa19.13■□□□□ 0.65
PHGDH-213ENST00000641272 EPC2Q52LR7 807 aa19.13■□□□□ 0.65
PHGDH-213ENST00000641272 SYNE3Q6ZMZ3 975 aa19.13■□□□□ 0.65
PHGDH-213ENST00000641272 DNAJB3Q8WWF6 145 aa19.13■□□□□ 0.65
PHGDH-213ENST00000641272 TOP1MTQ969P6 601 aa19.13■□□□□ 0.65
PHGDH-213ENST00000641272 EHMT1Q9H9B1 1298 aa19.13■□□□□ 0.65
PHGDH-213ENST00000641272 JPH1Q9HDC5 661 aaPredicted RBP19.13■□□□□ 0.65
PHGDH-213ENST00000641272 JADE2Q9NQC1 790 aa19.13■□□□□ 0.65
PHGDH-213ENST00000641272 ERAP1Q9NZ08 941 aa19.13■□□□□ 0.65
PHGDH-213ENST00000641272 LMCD1Q9NZU5 365 aa19.13■□□□□ 0.65
PHGDH-213ENST00000641272 NAP1L2Q9ULW6 460 aaPredicted RBP19.13■□□□□ 0.65
PHGDH-213ENST00000641272 GOLGA8AA7E2F4 631 aa19.12■□□□□ 0.65
PHGDH-213ENST00000641272 GOLGA8BA8MQT2 603 aa19.12■□□□□ 0.65
PHGDH-213ENST00000641272 KCNA5P22460 613 aa19.12■□□□□ 0.65
PHGDH-213ENST00000641272 LPIN1Q14693 890 aa19.12■□□□□ 0.65
PHGDH-213ENST00000641272 BMP2KLQ5H9B9 411 aa19.12■□□□□ 0.65
PHGDH-213ENST00000641272 FAM26DQ5JW98 314 aa19.12■□□□□ 0.65
PHGDH-213ENST00000641272 RNF20Q5VTR2 975 aa19.12■□□□□ 0.65
PHGDH-213ENST00000641272 CYP2W1Q8TAV3 490 aa19.12■□□□□ 0.65
PHGDH-213ENST00000641272 TRAPPC12Q8WVT3 735 aa19.12■□□□□ 0.65
PHGDH-213ENST00000641272 APBB2Q92870 758 aa19.12■□□□□ 0.65
PHGDH-213ENST00000641272 NEK1Q96PY6 1258 aa19.12■□□□□ 0.65
PHGDH-213ENST00000641272 PCYT2Q99447 389 aa19.12■□□□□ 0.65
PHGDH-213ENST00000641272 ANO3Q9BYT9 981 aa19.12■□□□□ 0.65
PHGDH-213ENST00000641272 TMEM260Q9NX78 707 aa19.12■□□□□ 0.65
PHGDH-213ENST00000641272 CDY2AQ9Y6F7 541 aa19.12■□□□□ 0.65
PHGDH-213ENST00000641272 KLF18A0A0U1RQI7 1052 aa19.11■□□□□ 0.65
PHGDH-213ENST00000641272 ZBTB43O43298 467 aa19.11■□□□□ 0.65
PHGDH-213ENST00000641272 CTNNB1P35222 781 aa19.11■□□□□ 0.65
PHGDH-213ENST00000641272 ADCY7P51828 1080 aa19.11■□□□□ 0.65
PHGDH-213ENST00000641272 TMEM62Q0P6H9 643 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms