RNA–Protein interactions for RNA: ENST00000636840.1

PNKP-226, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 117 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-226ENST00000636840 SLFN12Q8IYM2 578 aa9.3□□□□□ -0.92
PNKP-226ENST00000636840 OXER1Q8TDS5 423 aa9.3□□□□□ -0.92
PNKP-226ENST00000636840 SNX21Q969T3 373 aa9.3□□□□□ -0.92
PNKP-226ENST00000636840 INTS4Q96HW7 963 aaKnown RBP9.3□□□□□ -0.92
PNKP-226ENST00000636840 ERAP1Q9NZ08 941 aa9.3□□□□□ -0.92
PNKP-226ENST00000636840 ZMYND8Q9ULU4 1186 aaPredicted RBP9.3□□□□□ -0.92
PNKP-226ENST00000636840 CEP290O15078 2479 aa9.29□□□□□ -0.92
PNKP-226ENST00000636840 IGLV3-22A0A075B6J6 115 aa9.29□□□□□ -0.92
PNKP-226ENST00000636840 GSTTP1A0A1W2PQM5 241 aa9.29□□□□□ -0.92
PNKP-226ENST00000636840 C17orf102A2RUQ5 167 aa9.29□□□□□ -0.92
PNKP-226ENST00000636840 RRN3P2A6NIE6 340 aa9.29□□□□□ -0.92
PNKP-226ENST00000636840 WDR64B1ANS9 1081 aa9.29□□□□□ -0.92
PNKP-226ENST00000636840 DDX39AO00148 427 aaKnown RBP9.29□□□□□ -0.92
PNKP-226ENST00000636840 ADAMTS3O15072 1205 aa9.29□□□□□ -0.92
PNKP-226ENST00000636840 MSH4O15457 936 aa9.29□□□□□ -0.92
PNKP-226ENST00000636840 DKC1O60832 514 aaKnown RBP eCLIP9.29□□□□□ -0.92
PNKP-226ENST00000636840 CD2BP2O95400 341 aaKnown RBP9.29□□□□□ -0.92
PNKP-226ENST00000636840 F2P00734 622 aa9.29□□□□□ -0.92
PNKP-226ENST00000636840 ATP2B1P20020 1258 aa9.29□□□□□ -0.92
PNKP-226ENST00000636840 SFNP31947 248 aa9.29□□□□□ -0.92
PNKP-226ENST00000636840 STAT5BP51692 787 aa9.29□□□□□ -0.92
PNKP-226ENST00000636840 JAK3P52333 1124 aa9.29□□□□□ -0.92
PNKP-226ENST00000636840 ACTR2P61160 394 aa9.29□□□□□ -0.92
PNKP-226ENST00000636840 FAAP100Q0VG06 881 aa9.29□□□□□ -0.92
PNKP-226ENST00000636840 ST3GAL1Q11201 340 aa9.29□□□□□ -0.92
PNKP-226ENST00000636840 BFSP2Q13515 415 aa9.29□□□□□ -0.92
PNKP-226ENST00000636840 CUL4AQ13619 759 aa9.29□□□□□ -0.92
PNKP-226ENST00000636840 LRCH2Q5VUJ6 765 aa9.29□□□□□ -0.92
PNKP-226ENST00000636840 PLPPR4Q7Z2D5 763 aa9.29□□□□□ -0.92
PNKP-226ENST00000636840 SESTD1Q86VW0 696 aa9.29□□□□□ -0.92
PNKP-226ENST00000636840 FAM126BQ8IXS8 530 aa9.29□□□□□ -0.92
PNKP-226ENST00000636840 CKAP2LQ8IYA6 745 aa9.29□□□□□ -0.92
PNKP-226ENST00000636840 TMEM199Q8N511 208 aa9.29□□□□□ -0.92
PNKP-226ENST00000636840 KAT2BQ92831 832 aa9.29□□□□□ -0.92
PNKP-226ENST00000636840 C16orf70Q9BSU1 422 aa9.29□□□□□ -0.92
PNKP-226ENST00000636840 BCAS3Q9H6U6 928 aa9.29□□□□□ -0.92
PNKP-226ENST00000636840 NRBP2Q9NSY0 501 aa9.29□□□□□ -0.92
PNKP-226ENST00000636840 PCDHA10Q9Y5I2 948 aa9.29□□□□□ -0.92
PNKP-226ENST00000636840 HAS3O00219 553 aa9.28□□□□□ -0.92
PNKP-226ENST00000636840 KIAA0355O15063 1070 aa9.28□□□□□ -0.92
PNKP-226ENST00000636840 DHX15O43143 795 aaKnown RBP9.28□□□□□ -0.92
PNKP-226ENST00000636840 ATG7O95352 703 aa9.28□□□□□ -0.92
PNKP-226ENST00000636840 TDP2O95551 362 aa9.28□□□□□ -0.92
PNKP-226ENST00000636840 TIMP1P01033 207 aa9.28□□□□□ -0.92
PNKP-226ENST00000636840 CD4P01730 458 aa9.28□□□□□ -0.92
PNKP-226ENST00000636840 ZNF286BP0CG31 522 aa9.28□□□□□ -0.92
PNKP-226ENST00000636840 SYN1P17600 705 aa9.28□□□□□ -0.92
PNKP-226ENST00000636840 TRAPPC10P48553 1259 aa9.28□□□□□ -0.92
PNKP-226ENST00000636840 ITGB3BPQ13352 177 aaPredicted RBP9.28□□□□□ -0.92
PNKP-226ENST00000636840 ORC2Q13416 577 aaPredicted RBP9.28□□□□□ -0.92
PNKP-226ENST00000636840 PTGISQ16647 500 aa9.28□□□□□ -0.92
PNKP-226ENST00000636840 SWSAP1Q6NVH7 229 aa9.28□□□□□ -0.92
PNKP-226ENST00000636840 PDXDC2PQ6P474 469 aa9.28□□□□□ -0.92
PNKP-226ENST00000636840 ABHD15Q6UXT9 468 aa9.28□□□□□ -0.92
PNKP-226ENST00000636840 MIER3Q7Z3K6 550 aa9.28□□□□□ -0.92
PNKP-226ENST00000636840 RSPH3Q86UC2 560 aa9.28□□□□□ -0.92
PNKP-226ENST00000636840 NOSTRINQ8IVI9 506 aa9.28□□□□□ -0.92
PNKP-226ENST00000636840 RPUSD2Q8IZ73 545 aaKnown RBP9.28□□□□□ -0.92
PNKP-226ENST00000636840 RDM1Q8NG50 284 aa9.28□□□□□ -0.92
PNKP-226ENST00000636840 SLC5A5Q92911 643 aa9.28□□□□□ -0.92
PNKP-226ENST00000636840 ATP6V0A1Q93050 837 aa9.28□□□□□ -0.92
PNKP-226ENST00000636840 MBOAT7Q96N66 472 aa9.28□□□□□ -0.92
PNKP-226ENST00000636840 TRPV6Q9H1D0 765 aa9.28□□□□□ -0.92
PNKP-226ENST00000636840 ZNF302Q9NR11 478 aa9.28□□□□□ -0.92
PNKP-226ENST00000636840 PDLIM7Q9NR12 457 aa9.28□□□□□ -0.92
PNKP-226ENST00000636840 DISC1Q9NRI5 854 aa9.28□□□□□ -0.92
PNKP-226ENST00000636840 HDAC6Q9UBN7 1215 aa9.28□□□□□ -0.92
PNKP-226ENST00000636840 GTF2IRD1Q9UHL9 959 aa9.28□□□□□ -0.92
PNKP-226ENST00000636840 PCDHA12Q9UN75 941 aa9.28□□□□□ -0.92
PNKP-226ENST00000636840 FRMPD3Q5JV73 1810 aa9.28□□□□□ -0.92
PNKP-226ENST00000636840 GRIN2DO15399 1336 aa9.28□□□□□ -0.92
PNKP-226ENST00000636840 NRCAMQ92823 1304 aa9.28□□□□□ -0.92
PNKP-226ENST00000636840 TRIM43BA6NCK2 446 aa9.27□□□□□ -0.93
PNKP-226ENST00000636840 HBP1O60381 514 aa9.27□□□□□ -0.93
PNKP-226ENST00000636840 B4GALT4O60513 344 aa9.27□□□□□ -0.93
PNKP-226ENST00000636840 NEMFO60524 1076 aa9.27□□□□□ -0.93
PNKP-226ENST00000636840 LGR5O75473 907 aa9.27□□□□□ -0.93
PNKP-226ENST00000636840 PARNO95453 639 aaKnown RBP9.27□□□□□ -0.93
PNKP-226ENST00000636840 RPLP2P05387 115 aaKnown RBP9.27□□□□□ -0.93
PNKP-226ENST00000636840 U2AF2P26368 475 aaKnown RBP eCLIP9.27□□□□□ -0.93
PNKP-226ENST00000636840 PTK7Q13308 1070 aa9.27□□□□□ -0.93
PNKP-226ENST00000636840 PPIGQ13427 754 aaKnown RBP eCLIP9.27□□□□□ -0.934e-7■■■■■ 27.7
PNKP-226ENST00000636840 BECN1Q14457 450 aa9.27□□□□□ -0.93
PNKP-226ENST00000636840 CALCRLQ16602 461 aa9.27□□□□□ -0.93
PNKP-226ENST00000636840 MFSD5Q6N075 450 aa9.27□□□□□ -0.93
PNKP-226ENST00000636840 CAGE1Q8TC20 777 aa9.27□□□□□ -0.93
PNKP-226ENST00000636840 TRIM43Q96BQ3 446 aaPredicted RBP9.27□□□□□ -0.93
PNKP-226ENST00000636840 FAM167AQ96KS9 214 aa9.27□□□□□ -0.93
PNKP-226ENST00000636840 UIMC1Q96RL1 719 aa9.27□□□□□ -0.93
PNKP-226ENST00000636840 UBE2OQ9C0C9 1292 aaKnown RBP9.27□□□□□ -0.93
PNKP-226ENST00000636840 HIPK3Q9H422 1215 aa9.27□□□□□ -0.93
PNKP-226ENST00000636840 RNPEPQ9H4A4 650 aa9.27□□□□□ -0.93
PNKP-226ENST00000636840 TRPC6Q9Y210 931 aa9.27□□□□□ -0.93
PNKP-226ENST00000636840 LRRC37A2A6NM11 1700 aa9.27□□□□□ -0.93
PNKP-226ENST00000636840 EMSYQ7Z589 1322 aa9.27□□□□□ -0.93
PNKP-226ENST00000636840 KAT6AQ92794 2004 aa9.26□□□□□ -0.93
PNKP-226ENST00000636840 POTEB3A0JP26 581 aa9.26□□□□□ -0.93
PNKP-226ENST00000636840 CHMP2AO43633 222 aa9.26□□□□□ -0.93
PNKP-226ENST00000636840 PSMD10O75832 226 aa9.26□□□□□ -0.93
PNKP-226ENST00000636840 SMIM10L2AP0DMW4 78 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms