RNA–Protein interactions for RNA: ENST00000627685.2

TCF4-260, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-260ENST00000627685 SYN1P17600 705 aa8.88□□□□□ -0.99
TCF4-260ENST00000627685 CDK7P50613 346 aa8.88□□□□□ -0.99
TCF4-260ENST00000627685 ACLYP53396 1101 aa8.88□□□□□ -0.99
TCF4-260ENST00000627685 RTP1P59025 263 aa8.88□□□□□ -0.99
TCF4-260ENST00000627685 WTAPQ15007 396 aa8.88□□□□□ -0.99
TCF4-260ENST00000627685 PWP2Q15269 919 aaKnown RBP8.88□□□□□ -0.99
TCF4-260ENST00000627685 USH1GQ495M9 461 aa8.88□□□□□ -0.99
TCF4-260ENST00000627685 TRIM60Q495X7 471 aa8.88□□□□□ -0.99
TCF4-260ENST00000627685 APOA5Q6Q788 366 aa8.88□□□□□ -0.99
TCF4-260ENST00000627685 SLC39A5Q6ZMH5 540 aa8.88□□□□□ -0.99
TCF4-260ENST00000627685 NPAS3Q8IXF0 933 aa8.88□□□□□ -0.99
TCF4-260ENST00000627685 CMTR1Q8N1G2 835 aaKnown RBP8.88□□□□□ -0.99
TCF4-260ENST00000627685 IL17RAQ96F46 866 aa8.88□□□□□ -0.99
TCF4-260ENST00000627685 CTAGE1Q96RT6 745 aa8.88□□□□□ -0.99
TCF4-260ENST00000627685 SENP6Q9GZR1 1112 aaPredicted RBP8.88□□□□□ -0.99
TCF4-260ENST00000627685 MAF1Q9H063 256 aa8.88□□□□□ -0.99
TCF4-260ENST00000627685 PDLIM7Q9NR12 457 aa8.88□□□□□ -0.99
TCF4-260ENST00000627685 ZHX1Q9UKY1 873 aaPredicted RBP8.88□□□□□ -0.99
TCF4-260ENST00000627685 FAM184BQ9ULE4 1060 aa8.88□□□□□ -0.99
TCF4-260ENST00000627685 ZMYND8Q9ULU4 1186 aaPredicted RBP8.88□□□□□ -0.99
TCF4-260ENST00000627685 TRIM43BA6NCK2 446 aa8.87□□□□□ -0.99
TCF4-260ENST00000627685 KBTBD13C9JR72 458 aa8.87□□□□□ -0.99
TCF4-260ENST00000627685 H3BM21 787 aa8.87□□□□□ -0.99
TCF4-260ENST00000627685 MEN1O00255 615 aa8.87□□□□□ -0.99
TCF4-260ENST00000627685 ZBTB5O15062 677 aa8.87□□□□□ -0.99
TCF4-260ENST00000627685 CDC27P30260 824 aa8.87□□□□□ -0.99
TCF4-260ENST00000627685 MAGEA10P43363 369 aaPredicted RBP8.87□□□□□ -0.99
TCF4-260ENST00000627685 EPHB4P54760 987 aa8.87□□□□□ -0.99
TCF4-260ENST00000627685 BEX3Q00994 111 aa8.87□□□□□ -0.99
TCF4-260ENST00000627685 RNF207Q6ZRF8 634 aa8.87□□□□□ -0.99
TCF4-260ENST00000627685 TMTC3Q6ZXV5 915 aa8.87□□□□□ -0.99
TCF4-260ENST00000627685 ANKRD33Q7Z3H0 272 aa8.87□□□□□ -0.99
TCF4-260ENST00000627685 RALYLQ86SE5 291 aaKnown RBP8.87□□□□□ -0.99
TCF4-260ENST00000627685 RNF180Q86T96 592 aa8.87□□□□□ -0.99
TCF4-260ENST00000627685 RNF135Q8IUD6 432 aa8.87□□□□□ -0.99
TCF4-260ENST00000627685 FBXL16Q8N461 479 aa8.87□□□□□ -0.99
TCF4-260ENST00000627685 COPS5Q92905 334 aa8.87□□□□□ -0.99
TCF4-260ENST00000627685 TRIM43Q96BQ3 446 aaPredicted RBP8.87□□□□□ -0.99
TCF4-260ENST00000627685 TMEM87BQ96K49 555 aa8.87□□□□□ -0.99
TCF4-260ENST00000627685 VTA1Q9NP79 307 aa8.87□□□□□ -0.99
TCF4-260ENST00000627685 TBX21Q9UL17 535 aa8.87□□□□□ -0.99
TCF4-260ENST00000627685 ISY1Q9ULR0 285 aaKnown RBP8.87□□□□□ -0.99
TCF4-260ENST00000627685 TELO2Q9Y4R8 837 aa8.87□□□□□ -0.99
TCF4-260ENST00000627685 ASB14A6NK59 587 aa8.86□□□□□ -0.99
TCF4-260ENST00000627685 MEIS2O14770 477 aa8.86□□□□□ -0.99
TCF4-260ENST00000627685 CD4P01730 458 aa8.86□□□□□ -0.99
TCF4-260ENST00000627685 HOXD8P13378 290 aaPredicted RBP8.86□□□□□ -0.99
TCF4-260ENST00000627685 CALML3P27482 149 aa8.86□□□□□ -0.99
TCF4-260ENST00000627685 MCM5P33992 734 aa8.86□□□□□ -0.99
TCF4-260ENST00000627685 EVCP57679 992 aa8.86□□□□□ -0.99
TCF4-260ENST00000627685 PTSQ03393 145 aa8.86□□□□□ -0.99
TCF4-260ENST00000627685 ARHGAP1Q07960 439 aa8.86□□□□□ -0.99
TCF4-260ENST00000627685 FAAP100Q0VG06 881 aa8.86□□□□□ -0.99
TCF4-260ENST00000627685 KCNA10Q16322 511 aa8.86□□□□□ -0.99
TCF4-260ENST00000627685 DUSP28Q4G0W2 176 aa8.86□□□□□ -0.99
TCF4-260ENST00000627685 LCE2CQ5TA81 110 aa8.86□□□□□ -0.99
TCF4-260ENST00000627685 ERICH6BQ5W0A0 696 aa8.86□□□□□ -0.99
TCF4-260ENST00000627685 EEPD1Q7L9B9 569 aa8.86□□□□□ -0.99
TCF4-260ENST00000627685 CYP2U1Q7Z449 544 aa8.86□□□□□ -0.99
TCF4-260ENST00000627685 TLK2Q86UE8 772 aa8.86□□□□□ -0.99
TCF4-260ENST00000627685 FBXO11Q86XK2 927 aa8.86□□□□□ -0.99
TCF4-260ENST00000627685 FAM126BQ8IXS8 530 aa8.86□□□□□ -0.99
TCF4-260ENST00000627685 PHTF2Q8N3S3 785 aa8.86□□□□□ -0.99
TCF4-260ENST00000627685 DNERQ8NFT8 737 aa8.86□□□□□ -0.99
TCF4-260ENST00000627685 RNF217Q8TC41 542 aa8.86□□□□□ -0.99
TCF4-260ENST00000627685 IRF7Q92985 503 aa8.86□□□□□ -0.99
TCF4-260ENST00000627685 FERMT2Q96AC1 680 aa8.86□□□□□ -0.99
TCF4-260ENST00000627685 PDCD2LQ9BRP1 358 aa8.86□□□□□ -0.99
TCF4-260ENST00000627685 BCAS3Q9H6U6 928 aa8.86□□□□□ -0.99
TCF4-260ENST00000627685 PXMP2Q9NR77 195 aa8.86□□□□□ -0.99
TCF4-260ENST00000627685 PPP4R2Q9NY27 417 aa8.86□□□□□ -0.99
TCF4-260ENST00000627685 DOLKQ9UPQ8 538 aa8.86□□□□□ -0.99
TCF4-260ENST00000627685 A0A1W2PRU2 124 aa8.85□□□□□ -0.99
TCF4-260ENST00000627685 PTPDC1A2A3K4 754 aa8.85□□□□□ -0.99
TCF4-260ENST00000627685 EDIL3O43854 480 aa8.85□□□□□ -0.99
TCF4-260ENST00000627685 PPFIA3O75145 1194 aa8.85□□□□□ -0.99
TCF4-260ENST00000627685 ASGR1P07306 291 aa8.85□□□□□ -0.99
TCF4-260ENST00000627685 SMARCA1P28370 1054 aa8.85□□□□□ -0.99
TCF4-260ENST00000627685 HOXA13P31271 388 aaPredicted RBP8.85□□□□□ -0.99
TCF4-260ENST00000627685 SOX11P35716 441 aa8.85□□□□□ -0.99
TCF4-260ENST00000627685 MRPS9P82933 396 aaKnown RBP8.85□□□□□ -0.99
TCF4-260ENST00000627685 TNFAIP2Q03169 654 aa8.85□□□□□ -0.99
TCF4-260ENST00000627685 TLE2Q04725 743 aa8.85□□□□□ -0.99
TCF4-260ENST00000627685 TRDNQ13061 729 aa8.85□□□□□ -0.99
TCF4-260ENST00000627685 TOB2Q14106 344 aaPredicted RBP8.85□□□□□ -0.99
TCF4-260ENST00000627685 NTRK3Q16288 839 aa8.85□□□□□ -0.99
TCF4-260ENST00000627685 LRIT3Q3SXY7 679 aa8.85□□□□□ -0.99
TCF4-260ENST00000627685 FOXD4L5Q5VV16 416 aaPredicted RBP8.85□□□□□ -0.99
TCF4-260ENST00000627685 DHX32Q7L7V1 743 aaKnown RBP8.85□□□□□ -0.99
TCF4-260ENST00000627685 HOMER1Q86YM7 354 aa8.85□□□□□ -0.99
TCF4-260ENST00000627685 TOX2Q96NM4 488 aa8.85□□□□□ -0.99
TCF4-260ENST00000627685 NEK1Q96PY6 1258 aa8.85□□□□□ -0.99
TCF4-260ENST00000627685 AMNQ9BXJ7 453 aa8.85□□□□□ -0.99
TCF4-260ENST00000627685 USP26Q9BXU7 913 aa8.85□□□□□ -0.99
TCF4-260ENST00000627685 VAT1LQ9HCJ6 419 aa8.85□□□□□ -0.99
TCF4-260ENST00000627685 ELP1O95163 1332 aa8.84□□□□□ -0.99
TCF4-260ENST00000627685 UMODL1Q5DID0 1318 aa8.84□□□□□ -0.99
TCF4-260ENST00000627685 PNMA6FA0A0J9YX94 578 aa8.84□□□□□ -0.99
TCF4-260ENST00000627685 hCG_1642624A0A1W2PR95 340 aa8.84□□□□□ -0.99
TCF4-260ENST00000627685 A6NJR5 290 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms