RNA–Protein interactions for RNA: ENST00000627328.2

PTP4A2-220, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 5 BASIC

Gene PTP4A2, Length 615 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-220ENST00000627328 PDPK1O15530 556 aa4.89□□□□□ -1.63
PTP4A2-220ENST00000627328 LRG1P02750 347 aa4.89□□□□□ -1.63
PTP4A2-220ENST00000627328 CHGBP05060 677 aa4.89□□□□□ -1.63
PTP4A2-220ENST00000627328 NAT1P18440 290 aa4.89□□□□□ -1.63
PTP4A2-220ENST00000627328 ATP2B1P20020 1258 aa4.89□□□□□ -1.63
PTP4A2-220ENST00000627328 CDSNQ15517 529 aa4.89□□□□□ -1.63
PTP4A2-220ENST00000627328 LONRF2Q1L5Z9 754 aa4.89□□□□□ -1.63
PTP4A2-220ENST00000627328 PRAMEF18Q5VWM3 479 aa4.89□□□□□ -1.63
PTP4A2-220ENST00000627328 LRP10Q7Z4F1 713 aa4.89□□□□□ -1.63
PTP4A2-220ENST00000627328 PLEKHH3Q7Z736 793 aa4.89□□□□□ -1.63
PTP4A2-220ENST00000627328 UHMK1Q8TAS1 419 aaKnown RBP4.89□□□□□ -1.63
PTP4A2-220ENST00000627328 ALG1Q9BT22 464 aa4.89□□□□□ -1.63
PTP4A2-220ENST00000627328 HIRIP3Q9BW71 556 aaPredicted RBP4.89□□□□□ -1.63
PTP4A2-220ENST00000627328 SPATA9Q9BWV2 254 aa4.89□□□□□ -1.63
PTP4A2-220ENST00000627328 L2HGDHQ9H9P8 463 aa4.89□□□□□ -1.63
PTP4A2-220ENST00000627328 SIRPGQ9P1W8 387 aa4.89□□□□□ -1.63
PTP4A2-220ENST00000627328 DDX3XO00571 662 aaKnown RBP eCLIP4.88□□□□□ -1.63
PTP4A2-220ENST00000627328 AQP7O14520 342 aa4.88□□□□□ -1.63
PTP4A2-220ENST00000627328 MSCO60682 206 aa4.88□□□□□ -1.63
PTP4A2-220ENST00000627328 GNAT1P11488 350 aa4.88□□□□□ -1.63
PTP4A2-220ENST00000627328 FHL2Q14192 279 aa4.88□□□□□ -1.63
PTP4A2-220ENST00000627328 ZC3H12BQ5HYM0 836 aaKnown RBP4.88□□□□□ -1.63
PTP4A2-220ENST00000627328 HABP4Q5JVS0 413 aaKnown RBP4.88□□□□□ -1.63
PTP4A2-220ENST00000627328 MCTP2Q6DN12 878 aa4.88□□□□□ -1.63
PTP4A2-220ENST00000627328 MAMDC2Q7Z304 686 aaPredicted RBP4.88□□□□□ -1.63
PTP4A2-220ENST00000627328 TXNDC5Q8NBS9 432 aaKnown RBP4.88□□□□□ -1.63
PTP4A2-220ENST00000627328 PIP4K2CQ8TBX8 421 aa4.88□□□□□ -1.63
PTP4A2-220ENST00000627328 YTHDC1Q96MU7 727 aaKnown RBP4.88□□□□□ -1.63
PTP4A2-220ENST00000627328 IPO9Q96P70 1041 aaKnown RBP4.88□□□□□ -1.63
PTP4A2-220ENST00000627328 JAM3Q9BX67 310 aa4.88□□□□□ -1.63
PTP4A2-220ENST00000627328 TANGO6Q9C0B7 1094 aa4.88□□□□□ -1.63
PTP4A2-220ENST00000627328 ST6GALNAC2Q9UJ37 374 aa4.88□□□□□ -1.63
PTP4A2-220ENST00000627328 PCSK5Q92824 1860 aa4.88□□□□□ -1.63
PTP4A2-220ENST00000627328 SOD2P04179 222 aa4.87□□□□□ -1.63
PTP4A2-220ENST00000627328 CYP1A1P04798 512 aaPredicted RBP4.87□□□□□ -1.63
PTP4A2-220ENST00000627328 IL13P35225 146 aa4.87□□□□□ -1.63
PTP4A2-220ENST00000627328 EPHA5P54756 1037 aa4.87□□□□□ -1.63
PTP4A2-220ENST00000627328 SUMO1P63165 101 aaKnown RBP4.87□□□□□ -1.63
PTP4A2-220ENST00000627328 NTRK3Q16288 839 aa4.87□□□□□ -1.63
PTP4A2-220ENST00000627328 MTERF2Q49AM1 385 aa4.87□□□□□ -1.63
PTP4A2-220ENST00000627328 VASNQ6EMK4 673 aa4.87□□□□□ -1.63
PTP4A2-220ENST00000627328 GLB1LQ6UWU2 654 aa4.87□□□□□ -1.63
PTP4A2-220ENST00000627328 ZBTB38Q8NAP3 1195 aaPredicted RBP4.87□□□□□ -1.63
PTP4A2-220ENST00000627328 SYT3Q9BQG1 590 aa4.87□□□□□ -1.63
PTP4A2-220ENST00000627328 TMEM168Q9H0V1 697 aa4.87□□□□□ -1.63
PTP4A2-220ENST00000627328 DLL4Q9NR61 685 aa4.87□□□□□ -1.63
PTP4A2-220ENST00000627328 PPP1R1BQ9UD71 204 aaPredicted RBP4.87□□□□□ -1.63
PTP4A2-220ENST00000627328 FTSJ1Q9UET6 329 aa4.87□□□□□ -1.63
PTP4A2-220ENST00000627328 DSEQ9UL01 958 aa4.87□□□□□ -1.63
PTP4A2-220ENST00000627328 WNT9AO14904 365 aa4.86□□□□□ -1.63
PTP4A2-220ENST00000627328 SLC27A2O14975 620 aa4.86□□□□□ -1.63
PTP4A2-220ENST00000627328 PPFIA2O75334 1257 aa4.86□□□□□ -1.63
PTP4A2-220ENST00000627328 LMO1P25800 156 aa4.86□□□□□ -1.63
PTP4A2-220ENST00000627328 PAK1Q13153 545 aa4.86□□□□□ -1.63
PTP4A2-220ENST00000627328 SOGA3Q5TF21 947 aa4.86□□□□□ -1.63
PTP4A2-220ENST00000627328 LRCH2Q5VUJ6 765 aa4.86□□□□□ -1.63
PTP4A2-220ENST00000627328 PKN3Q6P5Z2 889 aa4.86□□□□□ -1.63
PTP4A2-220ENST00000627328 KCNT2Q6UVM3 1135 aa4.86□□□□□ -1.63
PTP4A2-220ENST00000627328 STK32CQ86UX6 486 aa4.86□□□□□ -1.63
PTP4A2-220ENST00000627328 NLGN4XQ8N0W4 816 aa4.86□□□□□ -1.63
PTP4A2-220ENST00000627328 KLHL36Q8N4N3 616 aa4.86□□□□□ -1.63
PTP4A2-220ENST00000627328 DTX3Q8N9I9 347 aa4.86□□□□□ -1.63
PTP4A2-220ENST00000627328 CLEC4DQ8WXI8 215 aa4.86□□□□□ -1.63
PTP4A2-220ENST00000627328 PTPRN2Q92932 1015 aa4.86□□□□□ -1.63
PTP4A2-220ENST00000627328 CDC6Q99741 560 aa4.86□□□□□ -1.63
PTP4A2-220ENST00000627328 GSTA4O15217 222 aa4.85□□□□□ -1.63
PTP4A2-220ENST00000627328 ADCY3O60266 1144 aa4.85□□□□□ -1.63
PTP4A2-220ENST00000627328 APPP05067 770 aa4.85□□□□□ -1.63
PTP4A2-220ENST00000627328 ENO2P09104 434 aaPredicted RBP4.85□□□□□ -1.63
PTP4A2-220ENST00000627328 FAHP16930 419 aa4.85□□□□□ -1.63
PTP4A2-220ENST00000627328 MLLT6P55198 1093 aaPredicted RBP4.85□□□□□ -1.63
PTP4A2-220ENST00000627328 SSRP1Q08945 709 aaKnown RBP4.85□□□□□ -1.63
PTP4A2-220ENST00000627328 TUSC3Q13454 348 aa4.85□□□□□ -1.63
PTP4A2-220ENST00000627328 PAN2Q504Q3 1202 aaKnown RBP4.85□□□□□ -1.63
PTP4A2-220ENST00000627328 YOD1Q5VVQ6 348 aaPredicted RBP4.85□□□□□ -1.63
PTP4A2-220ENST00000627328 KCTD1Q719H9 257 aa4.85□□□□□ -1.63
PTP4A2-220ENST00000627328 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.85□□□□□ -1.63
PTP4A2-220ENST00000627328 CHFRQ96EP1 664 aa4.85□□□□□ -1.63
PTP4A2-220ENST00000627328 KLC2Q9H0B6 622 aa4.85□□□□□ -1.63
PTP4A2-220ENST00000627328 BARX1Q9HBU1 254 aaPredicted RBP4.85□□□□□ -1.63
PTP4A2-220ENST00000627328 PODXL2Q9NZ53 605 aa4.85□□□□□ -1.63
PTP4A2-220ENST00000627328 PPARGC1AQ9UBK2 798 aaKnown RBP4.85□□□□□ -1.63
PTP4A2-220ENST00000627328 INVSQ9Y283 1065 aa4.85□□□□□ -1.63
PTP4A2-220ENST00000627328 TRBV23-1A0A0A0MS06 115 aa4.84□□□□□ -1.63
PTP4A2-220ENST00000627328 LAMTOR5O43504 91 aa4.84□□□□□ -1.63
PTP4A2-220ENST00000627328 NANOS3P60323 173 aaKnown RBP4.84□□□□□ -1.63
PTP4A2-220ENST00000627328 GABREP78334 506 aa4.84□□□□□ -1.63
PTP4A2-220ENST00000627328 RBL2Q08999 1139 aa4.84□□□□□ -1.63
PTP4A2-220ENST00000627328 SPATC1Q76KD6 591 aa4.84□□□□□ -1.63
PTP4A2-220ENST00000627328 PROSER1Q86XN7 944 aa4.84□□□□□ -1.63
PTP4A2-220ENST00000627328 KCNJ15Q99712 375 aa4.84□□□□□ -1.63
PTP4A2-220ENST00000627328 SSBP3Q9BWW4 388 aaPredicted RBP4.84□□□□□ -1.63
PTP4A2-220ENST00000627328 CROTQ9UKG9 612 aa4.84□□□□□ -1.63
PTP4A2-220ENST00000627328 ZNF536O15090 1300 aa4.83□□□□□ -1.64
PTP4A2-220ENST00000627328 NKRFO15226 690 aaKnown RBP eCLIP4.83□□□□□ -1.64
PTP4A2-220ENST00000627328 B4GALT3O60512 393 aa4.83□□□□□ -1.64
PTP4A2-220ENST00000627328 FBXO21O94952 628 aa4.83□□□□□ -1.64
PTP4A2-220ENST00000627328 COL6A2P12110 1019 aa4.83□□□□□ -1.64
PTP4A2-220ENST00000627328 GJA4P35212 333 aa4.83□□□□□ -1.64
PTP4A2-220ENST00000627328 GPR19Q15760 415 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms