RNA–Protein interactions for RNA: ENST00000616288.4

PPP4R3B-205, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-205ENST00000616288 STAMBPO95630 424 aa14.67□□□□□ -0.06
PPP4R3B-205ENST00000616288 KRT16P08779 473 aa14.67□□□□□ -0.06
PPP4R3B-205ENST00000616288 PLCB3Q01970 1234 aa14.67□□□□□ -0.06
PPP4R3B-205ENST00000616288 OSBP2Q969R2 916 aa14.67□□□□□ -0.06
PPP4R3B-205ENST00000616288 ADCY3O60266 1144 aa14.66□□□□□ -0.06
PPP4R3B-205ENST00000616288 ZAP70P43403 619 aa14.66□□□□□ -0.06
PPP4R3B-205ENST00000616288 ZCWPW2Q504Y3 356 aa14.66□□□□□ -0.06
PPP4R3B-205ENST00000616288 PPP1R21Q6ZMI0 780 aa14.66□□□□□ -0.06
PPP4R3B-205ENST00000616288 UBL4BQ8N7F7 174 aa14.66□□□□□ -0.06
PPP4R3B-205ENST00000616288 MIGA1Q8NAN2 632 aa14.66□□□□□ -0.06
PPP4R3B-205ENST00000616288 NDST4Q9H3R1 872 aa14.66□□□□□ -0.06
PPP4R3B-205ENST00000616288 VPS37BQ9H9H4 285 aa14.66□□□□□ -0.06
PPP4R3B-205ENST00000616288 UBAP1Q9NZ09 502 aa14.66□□□□□ -0.06
PPP4R3B-205ENST00000616288 TMOD2Q9NZR1 351 aa14.66□□□□□ -0.06
PPP4R3B-205ENST00000616288 ACEP12821 1306 aa14.66□□□□□ -0.06
PPP4R3B-205ENST00000616288 KIAA0556O60303 1618 aa14.66□□□□□ -0.06
PPP4R3B-205ENST00000616288 ZNF844Q08AG5 666 aa14.66□□□□□ -0.06
PPP4R3B-205ENST00000616288 OXER1Q8TDS5 423 aa14.66□□□□□ -0.06
PPP4R3B-205ENST00000616288 HPSEQ9Y251 543 aa14.66□□□□□ -0.06
PPP4R3B-205ENST00000616288 CPSF1Q10570 1443 aaKnown RBP14.66□□□□□ -0.06
PPP4R3B-205ENST00000616288 NPATQ14207 1427 aa14.66□□□□□ -0.06
PPP4R3B-205ENST00000616288 CFAP65Q6ZU64 1925 aaKnown RBP14.66□□□□□ -0.06
PPP4R3B-205ENST00000616288 CCDC188H7C350 402 aa14.66□□□□□ -0.06
PPP4R3B-205ENST00000616288 PDE5AO76074 875 aa14.66□□□□□ -0.06
PPP4R3B-205ENST00000616288 OATP04181 439 aa14.66□□□□□ -0.06
PPP4R3B-205ENST00000616288 EXOSC10Q01780 885 aaKnown RBP14.66□□□□□ -0.06
PPP4R3B-205ENST00000616288 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.66□□□□□ -0.06
PPP4R3B-205ENST00000616288 ZNF570Q96NI8 536 aa14.66□□□□□ -0.06
PPP4R3B-205ENST00000616288 TMEM237Q96Q45 408 aa14.66□□□□□ -0.06
PPP4R3B-205ENST00000616288 ISCUQ9H1K1 167 aa14.66□□□□□ -0.06
PPP4R3B-205ENST00000616288 DNAAF2Q9NVR5 837 aaKnown RBP14.66□□□□□ -0.06
PPP4R3B-205ENST00000616288 UGGT1Q9NYU2 1555 aa14.66□□□□□ -0.06
PPP4R3B-205ENST00000616288 CTNNA2P26232 953 aa14.65□□□□□ -0.06
PPP4R3B-205ENST00000616288 TTLL7Q6ZT98 887 aa14.65□□□□□ -0.06
PPP4R3B-205ENST00000616288 RASSF3Q86WH2 238 aa14.65□□□□□ -0.06
PPP4R3B-205ENST00000616288 THAP9Q9H5L6 903 aa14.65□□□□□ -0.06
PPP4R3B-205ENST00000616288 DDX18Q9NVP1 670 aaKnown RBP14.65□□□□□ -0.06
PPP4R3B-205ENST00000616288 FBXO2Q9UK22 296 aaPredicted RBP14.65□□□□□ -0.06
PPP4R3B-205ENST00000616288 NOC2LQ9Y3T9 749 aaKnown RBP14.65□□□□□ -0.06
PPP4R3B-205ENST00000616288 FMNL1O95466 1100 aaPredicted RBP14.65□□□□□ -0.06
PPP4R3B-205ENST00000616288 TATP17735 454 aaPredicted RBP14.65□□□□□ -0.06
PPP4R3B-205ENST00000616288 XAGE2Q96GT9 111 aa14.65□□□□□ -0.06
PPP4R3B-205ENST00000616288 ATP2A1O14983 1001 aa14.65□□□□□ -0.06
PPP4R3B-205ENST00000616288 NDE1Q9NXR1 346 aa14.65□□□□□ -0.06
PPP4R3B-205ENST00000616288 SHBGP04278 402 aa14.65□□□□□ -0.06
PPP4R3B-205ENST00000616288 POTEJP0CG39 1038 aa14.65□□□□□ -0.06
PPP4R3B-205ENST00000616288 CALB2P22676 271 aa14.65□□□□□ -0.06
PPP4R3B-205ENST00000616288 CA4P22748 312 aa14.65□□□□□ -0.06
PPP4R3B-205ENST00000616288 SFSWAPQ12872 951 aaKnown RBP14.65□□□□□ -0.06
PPP4R3B-205ENST00000616288 ANKRD35Q8N283 1001 aa14.65□□□□□ -0.06
PPP4R3B-205ENST00000616288 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.65□□□□□ -0.06
PPP4R3B-205ENST00000616288 MBD4O95243 580 aa14.64□□□□□ -0.07
PPP4R3B-205ENST00000616288 TNFAIP3P21580 790 aa14.64□□□□□ -0.07
PPP4R3B-205ENST00000616288 HSPA1LP34931 641 aa14.64□□□□□ -0.07
PPP4R3B-205ENST00000616288 PCYT1AP49585 367 aa14.64□□□□□ -0.07
PPP4R3B-205ENST00000616288 SPRED3Q2MJR0 410 aa14.64□□□□□ -0.07
PPP4R3B-205ENST00000616288 KCTD21Q4G0X4 260 aa14.64□□□□□ -0.07
PPP4R3B-205ENST00000616288 TLDC1Q6P9B6 456 aa14.64□□□□□ -0.07
PPP4R3B-205ENST00000616288 TMEM120BA0PK00 339 aa14.64□□□□□ -0.07
PPP4R3B-205ENST00000616288 PPP1R2P41236 205 aa14.64□□□□□ -0.07
PPP4R3B-205ENST00000616288 INHBEP58166 350 aa14.64□□□□□ -0.07
PPP4R3B-205ENST00000616288 TRADDQ15628 312 aa14.64□□□□□ -0.07
PPP4R3B-205ENST00000616288 SNX30Q5VWJ9 437 aa14.64□□□□□ -0.07
PPP4R3B-205ENST00000616288 WDR60Q8WVS4 1066 aa14.64□□□□□ -0.07
PPP4R3B-205ENST00000616288 CCT6BQ92526 530 aa14.64□□□□□ -0.07
PPP4R3B-205ENST00000616288 MPP4Q96JB8 637 aa14.64□□□□□ -0.07
PPP4R3B-205ENST00000616288 NR1H4Q96RI1 486 aaPredicted RBP14.64□□□□□ -0.07
PPP4R3B-205ENST00000616288 ARMCX3Q9UH62 379 aaPredicted RBP14.64□□□□□ -0.07
PPP4R3B-205ENST00000616288 PNMA3Q9UL41 463 aa14.64□□□□□ -0.07
PPP4R3B-205ENST00000616288 GAS8O95995 478 aa14.64□□□□□ -0.07
PPP4R3B-205ENST00000616288 ACADSP16219 412 aa14.64□□□□□ -0.07
PPP4R3B-205ENST00000616288 HSPA9P38646 679 aaKnown RBP14.64□□□□□ -0.07
PPP4R3B-205ENST00000616288 ZNF211Q13398 564 aaPredicted RBP14.64□□□□□ -0.07
PPP4R3B-205ENST00000616288 SLC29A2Q14542 456 aa14.64□□□□□ -0.07
PPP4R3B-205ENST00000616288 PROSER3Q2NL68 480 aa14.64□□□□□ -0.07
PPP4R3B-205ENST00000616288 ZNF654Q8IZM8 581 aa14.64□□□□□ -0.07
PPP4R3B-205ENST00000616288 IQCKQ8N0W5 287 aa14.64□□□□□ -0.07
PPP4R3B-205ENST00000616288 PIDD1Q9HB75 910 aa14.64□□□□□ -0.07
PPP4R3B-205ENST00000616288 IQSEC3Q9UPP2 1182 aaPredicted RBP14.64□□□□□ -0.07
PPP4R3B-205ENST00000616288 TRAF3IP3Q9Y228 551 aa14.64□□□□□ -0.07
PPP4R3B-205ENST00000616288 LRCH1Q9Y2L9 728 aa14.64□□□□□ -0.07
PPP4R3B-205ENST00000616288 ABCC1P33527 1531 aa14.64□□□□□ -0.07
PPP4R3B-205ENST00000616288 A0A1W2PQC6 194 aa14.63□□□□□ -0.07
PPP4R3B-205ENST00000616288 GRID2IPA4D2P6 1211 aa14.63□□□□□ -0.07
PPP4R3B-205ENST00000616288 TSPY2A6NKD2 308 aa14.63□□□□□ -0.07
PPP4R3B-205ENST00000616288 DRD4P21917 467 aa14.63□□□□□ -0.07
PPP4R3B-205ENST00000616288 MARK3P27448 753 aa14.63□□□□□ -0.07
PPP4R3B-205ENST00000616288 ADCY8P40145 1251 aa14.63□□□□□ -0.07
PPP4R3B-205ENST00000616288 PEX5P50542 639 aa14.63□□□□□ -0.07
PPP4R3B-205ENST00000616288 ITIH3Q06033 890 aa14.63□□□□□ -0.07
PPP4R3B-205ENST00000616288 TRIP13Q15645 432 aaPredicted RBP14.63□□□□□ -0.07
PPP4R3B-205ENST00000616288 PPP2R5EQ16537 467 aa14.63□□□□□ -0.07
PPP4R3B-205ENST00000616288 LONRF1Q17RB8 773 aa14.63□□□□□ -0.07
PPP4R3B-205ENST00000616288 CABP7Q86V35 215 aa14.63□□□□□ -0.07
PPP4R3B-205ENST00000616288 LRRC43Q8N309 656 aa14.63□□□□□ -0.07
PPP4R3B-205ENST00000616288 SYT2Q8N9I0 419 aaPredicted RBP14.63□□□□□ -0.07
PPP4R3B-205ENST00000616288 FANCBQ8NB91 859 aa14.63□□□□□ -0.07
PPP4R3B-205ENST00000616288 STK32AQ8WU08 396 aa14.63□□□□□ -0.07
PPP4R3B-205ENST00000616288 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.63□□□□□ -0.073e-7■□□□□ 11.2
PPP4R3B-205ENST00000616288 RNPEPL1Q9HAU8 725 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms