RNA–Protein interactions for RNA: ENST00000615798.4

COL12A1-211, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 11,579 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-211ENST00000615798 FAM25GB3EWG6 89 aa9.98□□□□□ -0.81
COL12A1-211ENST00000615798 TCF3P15923 654 aa9.98□□□□□ -0.81
COL12A1-211ENST00000615798 KCNA1Q09470 495 aa9.98□□□□□ -0.81
COL12A1-211ENST00000615798 SDE2Q6IQ49 451 aa9.98□□□□□ -0.81
COL12A1-211ENST00000615798 RSAD2Q8WXG1 361 aa9.98□□□□□ -0.81
COL12A1-211ENST00000615798 ZBTB10Q96DT7 871 aa9.98□□□□□ -0.81
COL12A1-211ENST00000615798 ZRANB1Q9UGI0 708 aa9.98□□□□□ -0.81
COL12A1-211ENST00000615798 MINDY4BA8MYZ0 360 aa9.98□□□□□ -0.81
COL12A1-211ENST00000615798 HNRNPRO43390 633 aaKnown RBP9.98□□□□□ -0.81
COL12A1-211ENST00000615798 CCDC142Q17RM4 750 aa9.98□□□□□ -0.81
COL12A1-211ENST00000615798 SLC9C1Q4G0N8 1177 aa9.98□□□□□ -0.81
COL12A1-211ENST00000615798 UNC45BQ8IWX7 931 aa9.98□□□□□ -0.81
COL12A1-211ENST00000615798 FKBP14Q9NWM8 211 aa9.98□□□□□ -0.81
COL12A1-211ENST00000615798 IL1RAPL1Q9NZN1 696 aa9.98□□□□□ -0.81
COL12A1-211ENST00000615798 PSDA5PKW4 1024 aaPredicted RBP9.98□□□□□ -0.81
COL12A1-211ENST00000615798 GYG2O15488 501 aa9.98□□□□□ -0.81
COL12A1-211ENST00000615798 GCP02774 474 aa9.98□□□□□ -0.81
COL12A1-211ENST00000615798 CCNCP24863 283 aa9.98□□□□□ -0.81
COL12A1-211ENST00000615798 OTULINQ96BN8 352 aa9.98□□□□□ -0.81
COL12A1-211ENST00000615798 TINF2Q9BSI4 451 aa9.98□□□□□ -0.81
COL12A1-211ENST00000615798 BICC1Q9H694 974 aaKnown RBP9.98□□□□□ -0.81
COL12A1-211ENST00000615798 ATP8A1Q9Y2Q0 1164 aa9.98□□□□□ -0.81
COL12A1-211ENST00000615798 TRIM37O94972 964 aa9.98□□□□□ -0.81
COL12A1-211ENST00000615798 EEF1GP26641 437 aaKnown RBP9.98□□□□□ -0.81
COL12A1-211ENST00000615798 TUBA1BP68363 451 aa9.98□□□□□ -0.81
COL12A1-211ENST00000615798 TUBA1AQ71U36 451 aa9.98□□□□□ -0.81
COL12A1-211ENST00000615798 MYO1AQ9UBC5 1043 aa9.98□□□□□ -0.81
COL12A1-211ENST00000615798 TRIM13O60858 407 aa9.98□□□□□ -0.81
COL12A1-211ENST00000615798 HLA-DOAP06340 250 aa9.98□□□□□ -0.81
COL12A1-211ENST00000615798 RPL13P26373 211 aaKnown RBP9.98□□□□□ -0.81
COL12A1-211ENST00000615798 TRIM49P0CI25 452 aa9.98□□□□□ -0.81
COL12A1-211ENST00000615798 TRIM49CP0CI26 452 aa9.98□□□□□ -0.81
COL12A1-211ENST00000615798 XRCC5P13010 732 aaKnown RBP9.98□□□□□ -0.81
COL12A1-211ENST00000615798 IPO11Q9UI26 975 aaKnown RBP9.98□□□□□ -0.81
COL12A1-211ENST00000615798 TSC22D2O75157 780 aa9.98□□□□□ -0.81
COL12A1-211ENST00000615798 SEMA3FQ13275 785 aa9.98□□□□□ -0.81
COL12A1-211ENST00000615798 SLC9C2Q5TAH2 1124 aa9.98□□□□□ -0.81
COL12A1-211ENST00000615798 RSRC2Q7L4I2 434 aaKnown RBP9.98□□□□□ -0.81
COL12A1-211ENST00000615798 ATAD3AQ9NVI7 634 aa9.98□□□□□ -0.81
COL12A1-211ENST00000615798 LCA5LO95447 670 aa9.97□□□□□ -0.81
COL12A1-211ENST00000615798 CCDC84Q86UT8 332 aaPredicted RBP9.97□□□□□ -0.81
COL12A1-211ENST00000615798 PAPOLBQ9NRJ5 636 aaKnown RBP9.97□□□□□ -0.81
COL12A1-211ENST00000615798 KRIT1O00522 736 aa9.97□□□□□ -0.81
COL12A1-211ENST00000615798 PEX14O75381 377 aa9.97□□□□□ -0.81
COL12A1-211ENST00000615798 KLHL18O94889 574 aa9.97□□□□□ -0.81
COL12A1-211ENST00000615798 TJAP1Q5JTD0 557 aa9.97□□□□□ -0.81
COL12A1-211ENST00000615798 TMEM154Q6P9G4 183 aa9.97□□□□□ -0.81
COL12A1-211ENST00000615798 TSPAN18Q96SJ8 248 aa9.97□□□□□ -0.81
COL12A1-211ENST00000615798 C6orf50Q9HD87 102 aa9.97□□□□□ -0.81
COL12A1-211ENST00000615798 TUBA4AP68366 448 aa9.97□□□□□ -0.81
COL12A1-211ENST00000615798 KRT17Q04695 432 aa9.97□□□□□ -0.81
COL12A1-211ENST00000615798 ANO1Q5XXA6 986 aa9.97□□□□□ -0.81
COL12A1-211ENST00000615798 SRLQ86TD4 932 aa9.97□□□□□ -0.81
COL12A1-211ENST00000615798 CHAMP1Q96JM3 812 aa9.97□□□□□ -0.81
COL12A1-211ENST00000615798 CTNND1O60716 968 aaKnown RBP9.97□□□□□ -0.81
COL12A1-211ENST00000615798 ARHGEF18Q6ZSZ5 1173 aa9.97□□□□□ -0.81
COL12A1-211ENST00000615798 C16orf71Q8IYS4 520 aaPredicted RBP9.97□□□□□ -0.81
COL12A1-211ENST00000615798 NUDCD1Q96RS6 583 aa9.97□□□□□ -0.81
COL12A1-211ENST00000615798 PLEKHA4Q9H4M7 779 aa9.97□□□□□ -0.81
COL12A1-211ENST00000615798 TUFT1Q9NNX1 390 aa9.97□□□□□ -0.81
COL12A1-211ENST00000615798 CTNND2Q9UQB3 1225 aa9.97□□□□□ -0.81
COL12A1-211ENST00000615798 KCNA3P22001 575 aa9.97□□□□□ -0.81
COL12A1-211ENST00000615798 NSMCE1Q8WV22 266 aa9.97□□□□□ -0.81
COL12A1-211ENST00000615798 MROH5Q6ZUA9 1318 aa9.97□□□□□ -0.81
COL12A1-211ENST00000615798 C16orf96A6NNT2 1141 aa9.97□□□□□ -0.81
COL12A1-211ENST00000615798 EIF2S1P05198 315 aaKnown RBP9.97□□□□□ -0.81
COL12A1-211ENST00000615798 GSPT1P15170 499 aaKnown RBP9.97□□□□□ -0.81
COL12A1-211ENST00000615798 CCT3P49368 545 aaKnown RBP9.97□□□□□ -0.81
COL12A1-211ENST00000615798 KIF11P52732 1056 aa9.97□□□□□ -0.81
COL12A1-211ENST00000615798 BLOC1S6Q9UL45 172 aa9.97□□□□□ -0.81
COL12A1-211ENST00000615798 CAMSAP1Q5T5Y3 1602 aa9.97□□□□□ -0.81
COL12A1-211ENST00000615798 KRT16P08779 473 aa9.97□□□□□ -0.81
COL12A1-211ENST00000615798 MYL1P05976 194 aa9.97□□□□□ -0.81
COL12A1-211ENST00000615798 C18orf25Q96B23 403 aaPredicted RBP9.97□□□□□ -0.81
COL12A1-211ENST00000615798 NRDE2Q9H7Z3 1164 aa9.97□□□□□ -0.81
COL12A1-211ENST00000615798 PFKFB2O60825 505 aa9.97□□□□□ -0.81
COL12A1-211ENST00000615798 RGS9BPQ6ZS82 235 aa9.97□□□□□ -0.81
COL12A1-211ENST00000615798 ZBTB21Q9ULJ3 1066 aa9.97□□□□□ -0.81
COL12A1-211ENST00000615798 ARPC4-TTLL3A0A0A6YYG9 625 aa9.96□□□□□ -0.81
COL12A1-211ENST00000615798 ASAP2O43150 1006 aa9.96□□□□□ -0.81
COL12A1-211ENST00000615798 IL2RBP14784 551 aa9.96□□□□□ -0.81
COL12A1-211ENST00000615798 KPNA2P52292 529 aaKnown RBP9.96□□□□□ -0.81
COL12A1-211ENST00000615798 ARL13BQ3SXY8 428 aa9.96□□□□□ -0.81
COL12A1-211ENST00000615798 Q4G0T1 1027 aa9.96□□□□□ -0.81
COL12A1-211ENST00000615798 OSBPL10Q9BXB5 764 aa9.96□□□□□ -0.81
COL12A1-211ENST00000615798 PASKQ96RG2 1323 aa9.96□□□□□ -0.81
COL12A1-211ENST00000615798 PRLP01236 227 aa9.96□□□□□ -0.81
COL12A1-211ENST00000615798 ACTN3Q08043 901 aaPredicted RBP9.96□□□□□ -0.81
COL12A1-211ENST00000615798 POTEEQ6S8J3 1075 aa9.96□□□□□ -0.81
COL12A1-211ENST00000615798 STAMQ92783 540 aa9.96□□□□□ -0.81
COL12A1-211ENST00000615798 SNX25Q9H3E2 840 aa9.96□□□□□ -0.81
COL12A1-211ENST00000615798 CHMP1AQ9HD42 196 aaPredicted RBP9.96□□□□□ -0.81
COL12A1-211ENST00000615798 USP19O94966 1318 aa9.96□□□□□ -0.81
COL12A1-211ENST00000615798 TBCCQ15814 346 aa9.96□□□□□ -0.81
COL12A1-211ENST00000615798 WDR44Q5JSH3 913 aa9.96□□□□□ -0.81
COL12A1-211ENST00000615798 GALNT17Q6IS24 598 aa9.96□□□□□ -0.81
COL12A1-211ENST00000615798 MYH6P13533 1939 aa9.96□□□□□ -0.81
COL12A1-211ENST00000615798 SYNRGQ9UMZ2 1314 aa9.96□□□□□ -0.81
COL12A1-211ENST00000615798 M0R3G1 203 aa9.96□□□□□ -0.81
COL12A1-211ENST00000615798 MSL3P1P0C860 447 aa9.96□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms