RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 ACTR2P61160 394 aa16.54■□□□□ 0.24
CD48-203ENST00000613788 SP4Q02446 784 aa16.54■□□□□ 0.24
CD48-203ENST00000613788 EPHA7Q15375 998 aa16.54■□□□□ 0.24
CD48-203ENST00000613788 BRDTQ58F21 947 aaPredicted RBP16.54■□□□□ 0.24
CD48-203ENST00000613788 PPTC7Q8NI37 304 aa16.54■□□□□ 0.24
CD48-203ENST00000613788 ERMNQ8TAM6 284 aa16.54■□□□□ 0.24
CD48-203ENST00000613788 CLIC6Q96NY7 704 aa16.54■□□□□ 0.24
CD48-203ENST00000613788 DISC1Q9NRI5 854 aa16.54■□□□□ 0.24
CD48-203ENST00000613788 PCDHA10Q9Y5I2 948 aa16.54■□□□□ 0.24
CD48-203ENST00000613788 POTEMA6NI47 508 aa16.53■□□□□ 0.24
CD48-203ENST00000613788 ATG7O95352 703 aa16.53■□□□□ 0.24
CD48-203ENST00000613788 CCNE2O96020 404 aa16.53■□□□□ 0.24
CD48-203ENST00000613788 PSAPP07602 524 aa16.53■□□□□ 0.24
CD48-203ENST00000613788 UBA7P41226 1012 aa16.53■□□□□ 0.24
CD48-203ENST00000613788 GRIN1Q05586 938 aa16.53■□□□□ 0.24
CD48-203ENST00000613788 HSDL1Q3SXM5 330 aa16.53■□□□□ 0.24
CD48-203ENST00000613788 AXDND1Q5T1B0 1012 aaPredicted RBP16.53■□□□□ 0.24
CD48-203ENST00000613788 KRT79Q5XKE5 535 aa16.53■□□□□ 0.24
CD48-203ENST00000613788 MIS18BP1Q6P0N0 1132 aa16.53■□□□□ 0.24
CD48-203ENST00000613788 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.53■□□□□ 0.24
CD48-203ENST00000613788 EML1O00423 815 aa16.52■□□□□ 0.24
CD48-203ENST00000613788 PPFIA4O75335 1185 aa16.52■□□□□ 0.24
CD48-203ENST00000613788 TXLNAP40222 546 aa16.52■□□□□ 0.24
CD48-203ENST00000613788 CPT1AP50416 773 aa16.52■□□□□ 0.24
CD48-203ENST00000613788 GJA9P57773 515 aa16.52■□□□□ 0.24
CD48-203ENST00000613788 HAUS3Q68CZ6 603 aa16.52■□□□□ 0.24
CD48-203ENST00000613788 ABHD15Q6UXT9 468 aa16.52■□□□□ 0.24
CD48-203ENST00000613788 AFG1LQ8WV93 481 aa16.52■□□□□ 0.24
CD48-203ENST00000613788 ARMC5Q96C12 935 aa16.52■□□□□ 0.24
CD48-203ENST00000613788 GPR20Q99678 358 aa16.52■□□□□ 0.24
CD48-203ENST00000613788 XPNPEP3Q9NQH7 507 aa16.52■□□□□ 0.24
CD48-203ENST00000613788 TCHHQ07283 1943 aa16.51■□□□□ 0.23
CD48-203ENST00000613788 A0A1W2PQ27 194 aa16.51■□□□□ 0.23
CD48-203ENST00000613788 A0A1W2PQ64 194 aa16.51■□□□□ 0.23
CD48-203ENST00000613788 A0A1W2PQD8 194 aa16.51■□□□□ 0.23
CD48-203ENST00000613788 GSTTP1A0A1W2PQM5 241 aa16.51■□□□□ 0.23
CD48-203ENST00000613788 SLC26A4O43511 780 aa16.51■□□□□ 0.23
CD48-203ENST00000613788 PRPF40AO75400 957 aaKnown RBP16.51■□□□□ 0.23
CD48-203ENST00000613788 SUPT20HL2P0C7V6 817 aa16.51■□□□□ 0.23
CD48-203ENST00000613788 CCL5P13501 91 aa16.51■□□□□ 0.23
CD48-203ENST00000613788 CMA1P23946 247 aa16.51■□□□□ 0.23
CD48-203ENST00000613788 NEK9Q8TD19 979 aa16.51■□□□□ 0.23
CD48-203ENST00000613788 LENG1Q96BZ8 264 aaPredicted RBP16.51■□□□□ 0.23
CD48-203ENST00000613788 EIF2AK1Q9BQI3 630 aaKnown RBP16.51■□□□□ 0.23
CD48-203ENST00000613788 RNF208Q9H0X6 261 aa16.51■□□□□ 0.23
CD48-203ENST00000613788 UNC93B1Q9H1C4 597 aa16.51■□□□□ 0.23
CD48-203ENST00000613788 FAM13BQ9NYF5 915 aa16.51■□□□□ 0.23
CD48-203ENST00000613788 A6NJR5 290 aa16.5■□□□□ 0.23
CD48-203ENST00000613788 BACH1O14867 736 aa16.5■□□□□ 0.23
CD48-203ENST00000613788 ZEB2O60315 1214 aa16.5■□□□□ 0.23
CD48-203ENST00000613788 DKC1O60832 514 aaKnown RBP eCLIP16.5■□□□□ 0.23
CD48-203ENST00000613788 P4HBP07237 508 aaKnown RBP16.5■□□□□ 0.23
CD48-203ENST00000613788 C6orf222P0C671 652 aaPredicted RBP16.5■□□□□ 0.23
CD48-203ENST00000613788 PTGS1P23219 599 aa16.5■□□□□ 0.23
CD48-203ENST00000613788 TCF7P36402 384 aaPredicted RBP16.5■□□□□ 0.23
CD48-203ENST00000613788 NKX3-2P78367 333 aa16.5■□□□□ 0.23
CD48-203ENST00000613788 MTFR1Q15390 333 aa16.5■□□□□ 0.23
CD48-203ENST00000613788 DGKDQ16760 1214 aa16.5■□□□□ 0.23
CD48-203ENST00000613788 SPECC1Q5M775 1068 aa16.5■□□□□ 0.23
CD48-203ENST00000613788 SHC4Q6S5L8 630 aa16.5■□□□□ 0.23
CD48-203ENST00000613788 CABP7Q86V35 215 aa16.5■□□□□ 0.23
CD48-203ENST00000613788 SNX29Q8TEQ0 813 aa16.5■□□□□ 0.23
CD48-203ENST00000613788 ZNF333Q96JL9 665 aa16.5■□□□□ 0.23
CD48-203ENST00000613788 POLR3CQ9BUI4 534 aaPredicted RBP16.5■□□□□ 0.23
CD48-203ENST00000613788 CCSER1Q9C0I3 900 aa16.5■□□□□ 0.23
CD48-203ENST00000613788 UPF3AQ9H1J1 476 aaKnown RBP16.5■□□□□ 0.23
CD48-203ENST00000613788 AZI2Q9H6S1 392 aa16.5■□□□□ 0.23
CD48-203ENST00000613788 PAK6Q9NQU5 681 aaPredicted RBP16.5■□□□□ 0.23
CD48-203ENST00000613788 PP2D1A8MPX8 630 aa16.5■□□□□ 0.23
CD48-203ENST00000613788 KPNA6O60684 536 aa16.5■□□□□ 0.23
CD48-203ENST00000613788 MMP3P08254 477 aa16.5■□□□□ 0.23
CD48-203ENST00000613788 RPA1P27694 616 aa16.5■□□□□ 0.23
CD48-203ENST00000613788 CDC25AP30304 524 aa16.5■□□□□ 0.23
CD48-203ENST00000613788 CCT6AP40227 531 aaKnown RBP16.5■□□□□ 0.23
CD48-203ENST00000613788 FSCN1Q16658 493 aaKnown RBP16.5■□□□□ 0.23
CD48-203ENST00000613788 GNASQ5JWF2 1037 aa16.5■□□□□ 0.23
CD48-203ENST00000613788 FAM160B1Q5W0V3 765 aa16.5■□□□□ 0.23
CD48-203ENST00000613788 RESP18Q5W5W9 173 aa16.5■□□□□ 0.23
CD48-203ENST00000613788 LHX8Q68G74 356 aa16.5■□□□□ 0.23
CD48-203ENST00000613788 SWSAP1Q6NVH7 229 aa16.5■□□□□ 0.23
CD48-203ENST00000613788 RNF180Q86T96 592 aa16.5■□□□□ 0.23
CD48-203ENST00000613788 SYMPKQ92797 1274 aaKnown RBP16.5■□□□□ 0.23
CD48-203ENST00000613788 CALML4Q96GE6 196 aa16.5■□□□□ 0.23
CD48-203ENST00000613788 EPSTI1Q96J88 318 aa16.5■□□□□ 0.23
CD48-203ENST00000613788 HSD17B14Q9BPX1 270 aa16.5■□□□□ 0.23
CD48-203ENST00000613788 MCOLN1Q9GZU1 580 aa16.5■□□□□ 0.23
CD48-203ENST00000613788 TUFT1Q9NNX1 390 aa16.5■□□□□ 0.23
CD48-203ENST00000613788 CCDC39Q9UFE4 941 aa16.5■□□□□ 0.23
CD48-203ENST00000613788 SYNRGQ9UMZ2 1314 aa16.49■□□□□ 0.23
CD48-203ENST00000613788 HTTP42858 3142 aa16.49■□□□□ 0.23
CD48-203ENST00000613788 IGKV6D-21A0A0A0MT36 114 aa16.49■□□□□ 0.23
CD48-203ENST00000613788 POTEFA5A3E0 1075 aa16.49■□□□□ 0.23
CD48-203ENST00000613788 SLITRK3O94933 977 aa16.49■□□□□ 0.23
CD48-203ENST00000613788 PGK1P00558 417 aa16.49■□□□□ 0.23
CD48-203ENST00000613788 MYCP01106 439 aaPredicted RBP16.49■□□□□ 0.23
CD48-203ENST00000613788 MUTP22033 750 aa16.49■□□□□ 0.23
CD48-203ENST00000613788 QARSP47897 775 aaKnown RBP16.49■□□□□ 0.23
CD48-203ENST00000613788 PSMC5P62195 406 aa16.49■□□□□ 0.23
CD48-203ENST00000613788 UBE2HP62256 183 aa16.49■□□□□ 0.23
CD48-203ENST00000613788 CATSPER3Q86XQ3 398 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms