RNA–Protein interactions for RNA: ENST00000612839.1

CCL3L3-201, Transcript of C-C motif chemokine ligand 3 like 3, humanhuman

TSL 1 (best)

Gene CCL3L3, Length 1,458 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L3-201ENST00000612839 ATP11BQ9Y2G3 1177 aa12.87□□□□□ -0.35
CCL3L3-201ENST00000612839 CYP3A7-CYP3A51PA0A087WV96 503 aa12.86□□□□□ -0.35
CCL3L3-201ENST00000612839 FAM205CA6NFA0 338 aa12.86□□□□□ -0.35
CCL3L3-201ENST00000612839 ARVCFO00192 962 aa12.86□□□□□ -0.35
CCL3L3-201ENST00000612839 NOP56O00567 594 aaKnown RBP12.86□□□□□ -0.35
CCL3L3-201ENST00000612839 TDP2O95551 362 aa12.86□□□□□ -0.35
CCL3L3-201ENST00000612839 ZNF286BP0CG31 522 aa12.86□□□□□ -0.35
CCL3L3-201ENST00000612839 CYP3A7P24462 503 aa12.86□□□□□ -0.35
CCL3L3-201ENST00000612839 SETQ01105 290 aaPredicted RBP12.86□□□□□ -0.35
CCL3L3-201ENST00000612839 SP4Q02446 784 aa12.86□□□□□ -0.35
CCL3L3-201ENST00000612839 TLE2Q04725 743 aa12.86□□□□□ -0.35
CCL3L3-201ENST00000612839 CUL4AQ13619 759 aa12.86□□□□□ -0.35
CCL3L3-201ENST00000612839 C16orf70Q9BSU1 422 aa12.86□□□□□ -0.35
CCL3L3-201ENST00000612839 BRMS1Q9HCU9 246 aa12.86□□□□□ -0.35
CCL3L3-201ENST00000612839 TSHZ2Q9NRE2 1034 aa12.86□□□□□ -0.35
CCL3L3-201ENST00000612839 NFASCO94856 1347 aa12.86□□□□□ -0.35
CCL3L3-201ENST00000612839 IPO5O00410 1097 aaKnown RBP12.85□□□□□ -0.35
CCL3L3-201ENST00000612839 DHX15O43143 795 aaKnown RBP12.85□□□□□ -0.35
CCL3L3-201ENST00000612839 PQBP1O60828 265 aaKnown RBP12.85□□□□□ -0.35
CCL3L3-201ENST00000612839 F2P00734 622 aa12.85□□□□□ -0.35
CCL3L3-201ENST00000612839 GJB2P29033 226 aa12.85□□□□□ -0.35
CCL3L3-201ENST00000612839 MOXD1Q6UVY6 613 aa12.85□□□□□ -0.35
CCL3L3-201ENST00000612839 NEK8Q86SG6 692 aa12.85□□□□□ -0.35
CCL3L3-201ENST00000612839 FAM126BQ8IXS8 530 aa12.85□□□□□ -0.35
CCL3L3-201ENST00000612839 PPP1R13LQ8WUF5 828 aa12.85□□□□□ -0.35
CCL3L3-201ENST00000612839 MBOAT7Q96N66 472 aa12.85□□□□□ -0.35
CCL3L3-201ENST00000612839 TOX2Q96NM4 488 aa12.85□□□□□ -0.35
CCL3L3-201ENST00000612839 UIMC1Q96RL1 719 aa12.85□□□□□ -0.35
CCL3L3-201ENST00000612839 SDF4Q9BRK5 362 aa12.85□□□□□ -0.35
CCL3L3-201ENST00000612839 JPH1Q9HDC5 661 aaPredicted RBP12.85□□□□□ -0.35
CCL3L3-201ENST00000612839 SLC9A2Q9UBY0 812 aa12.85□□□□□ -0.35
CCL3L3-201ENST00000612839 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.85□□□□□ -0.35
CCL3L3-201ENST00000612839 NR2E3Q9Y5X4 410 aa12.85□□□□□ -0.35
CCL3L3-201ENST00000612839 MROH7Q68CQ1 1323 aa12.85□□□□□ -0.35
CCL3L3-201ENST00000612839 GSTTP1A0A1W2PQM5 241 aa12.85□□□□□ -0.35
CCL3L3-201ENST00000612839 H0YGN5 161 aa12.85□□□□□ -0.35
CCL3L3-201ENST00000612839 K7ELQ4 463 aaPredicted RBP12.85□□□□□ -0.35
CCL3L3-201ENST00000612839 HAS3O00219 553 aa12.85□□□□□ -0.35
CCL3L3-201ENST00000612839 MSH4O15457 936 aa12.85□□□□□ -0.35
CCL3L3-201ENST00000612839 LGALS2P05162 132 aa12.85□□□□□ -0.35
CCL3L3-201ENST00000612839 TCF7P36402 384 aaPredicted RBP12.85□□□□□ -0.35
CCL3L3-201ENST00000612839 FAAP100Q0VG06 881 aa12.85□□□□□ -0.35
CCL3L3-201ENST00000612839 LETM2Q2VYF4 491 aa12.85□□□□□ -0.35
CCL3L3-201ENST00000612839 NBPF20Q3BBV1 942 aa12.85□□□□□ -0.35
CCL3L3-201ENST00000612839 Q4G0T1 1027 aa12.85□□□□□ -0.35
CCL3L3-201ENST00000612839 SNX21Q969T3 373 aa12.85□□□□□ -0.35
CCL3L3-201ENST00000612839 ZNF577Q9BSK1 485 aa12.85□□□□□ -0.35
CCL3L3-201ENST00000612839 LTBP2Q14767 1821 aa12.84□□□□□ -0.35
CCL3L3-201ENST00000612839 SLC37A4O43826 429 aa12.84□□□□□ -0.35
CCL3L3-201ENST00000612839 CCNE2O96020 404 aa12.84□□□□□ -0.35
CCL3L3-201ENST00000612839 CD4P01730 458 aa12.84□□□□□ -0.35
CCL3L3-201ENST00000612839 CLTBP09497 229 aa12.84□□□□□ -0.35
CCL3L3-201ENST00000612839 SYN1P17600 705 aa12.84□□□□□ -0.35
CCL3L3-201ENST00000612839 EMP3P54852 163 aa12.84□□□□□ -0.35
CCL3L3-201ENST00000612839 SAFBQ15424 915 aaKnown RBP eCLIP12.84□□□□□ -0.35
CCL3L3-201ENST00000612839 KIAA0753Q2KHM9 967 aa12.84□□□□□ -0.35
CCL3L3-201ENST00000612839 PPP4R3AQ6IN85 833 aa12.84□□□□□ -0.35
CCL3L3-201ENST00000612839 NFRKBQ6P4R8 1299 aa12.84□□□□□ -0.35
CCL3L3-201ENST00000612839 SH3RF1Q7Z6J0 888 aa12.84□□□□□ -0.35
CCL3L3-201ENST00000612839 TRIM50Q86XT4 487 aa12.84□□□□□ -0.35
CCL3L3-201ENST00000612839 SEPT1Q8WYJ6 367 aa12.84□□□□□ -0.35
CCL3L3-201ENST00000612839 KATNAL1Q9BW62 490 aa12.84□□□□□ -0.35
CCL3L3-201ENST00000612839 SEZ6LQ9BYH1 1024 aa12.84□□□□□ -0.35
CCL3L3-201ENST00000612839 FOXP1Q9H334 677 aaPredicted RBP12.84□□□□□ -0.35
CCL3L3-201ENST00000612839 PDLIM7Q9NR12 457 aa12.84□□□□□ -0.35
CCL3L3-201ENST00000612839 DDX25Q9UHL0 483 aaKnown RBP12.84□□□□□ -0.35
CCL3L3-201ENST00000612839 ZMYND8Q9ULU4 1186 aaPredicted RBP12.84□□□□□ -0.35
CCL3L3-201ENST00000612839 SMC3Q9UQE7 1217 aa12.84□□□□□ -0.35
CCL3L3-201ENST00000612839 KIF3AQ9Y496 699 aa12.84□□□□□ -0.35
CCL3L3-201ENST00000612839 DCDC2CA8MYV0 355 aa12.83□□□□□ -0.36
CCL3L3-201ENST00000612839 KIF28PB7ZC32 967 aa12.83□□□□□ -0.36
CCL3L3-201ENST00000612839 H3BRB1 525 aa12.83□□□□□ -0.36
CCL3L3-201ENST00000612839 DDX39AO00148 427 aaKnown RBP12.83□□□□□ -0.36
CCL3L3-201ENST00000612839 WNT7AO00755 349 aa12.83□□□□□ -0.36
CCL3L3-201ENST00000612839 B4GALT4O60513 344 aa12.83□□□□□ -0.36
CCL3L3-201ENST00000612839 CCNT1O60563 726 aaKnown RBP12.83□□□□□ -0.36
CCL3L3-201ENST00000612839 PSEN2P49810 448 aa12.83□□□□□ -0.36
CCL3L3-201ENST00000612839 CHMP4BP1P59074 171 aa12.83□□□□□ -0.36
CCL3L3-201ENST00000612839 ACTR2P61160 394 aa12.83□□□□□ -0.36
CCL3L3-201ENST00000612839 MFSD10Q14728 455 aa12.83□□□□□ -0.36
CCL3L3-201ENST00000612839 FAM47CQ5HY64 1035 aa12.83□□□□□ -0.36
CCL3L3-201ENST00000612839 SESTD1Q86VW0 696 aa12.83□□□□□ -0.36
CCL3L3-201ENST00000612839 SPNS2Q8IVW8 549 aa12.83□□□□□ -0.36
CCL3L3-201ENST00000612839 ETNPPLQ8TBG4 499 aa12.83□□□□□ -0.36
CCL3L3-201ENST00000612839 GJA10Q969M2 543 aa12.83□□□□□ -0.36
CCL3L3-201ENST00000612839 TUT1Q9H6E5 874 aaKnown RBP12.83□□□□□ -0.36
CCL3L3-201ENST00000612839 TBC1D22BQ9NU19 505 aa12.83□□□□□ -0.36
CCL3L3-201ENST00000612839 WDR81Q562E7 1941 aa12.82□□□□□ -0.36
CCL3L3-201ENST00000612839 TRIM43BA6NCK2 446 aa12.82□□□□□ -0.36
CCL3L3-201ENST00000612839 ATG7O95352 703 aa12.82□□□□□ -0.36
CCL3L3-201ENST00000612839 GCFC2P16383 781 aaKnown RBP12.82□□□□□ -0.36
CCL3L3-201ENST00000612839 PTPN11Q06124 597 aaPredicted RBP12.82□□□□□ -0.36
CCL3L3-201ENST00000612839 UTP14CQ5TAP6 766 aaKnown RBP12.82□□□□□ -0.36
CCL3L3-201ENST00000612839 PRPF38BQ5VTL8 546 aaKnown RBP12.82□□□□□ -0.36
CCL3L3-201ENST00000612839 SLC5A5Q92911 643 aa12.82□□□□□ -0.36
CCL3L3-201ENST00000612839 TRIM43Q96BQ3 446 aaPredicted RBP12.82□□□□□ -0.36
CCL3L3-201ENST00000612839 INTS4Q96HW7 963 aaKnown RBP12.82□□□□□ -0.36
CCL3L3-201ENST00000612839 PCYT2Q99447 389 aa12.82□□□□□ -0.36
CCL3L3-201ENST00000612839 RIT2Q99578 217 aa12.82□□□□□ -0.36
CCL3L3-201ENST00000612839 TRPV6Q9H1D0 765 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms