RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 SLC12A7Q9Y666 1083 aa15.13■□□□□ 0.01
RPS28-204ENST00000602140 TCF20Q9UGU0 1960 aaKnown RBP15.13■□□□□ 0.01
RPS28-204ENST00000602140 ATP9AO75110 1047 aa15.12■□□□□ 0.01
RPS28-204ENST00000602140 TCF7P36402 384 aaPredicted RBP15.12■□□□□ 0.01
RPS28-204ENST00000602140 ADAM17P78536 824 aa15.12■□□□□ 0.01
RPS28-204ENST00000602140 HTRA4P83105 476 aaPredicted RBP15.12■□□□□ 0.01
RPS28-204ENST00000602140 UBE2SQ16763 222 aa15.12■□□□□ 0.01
RPS28-204ENST00000602140 FANCBQ8NB91 859 aa15.12■□□□□ 0.01
RPS28-204ENST00000602140 LMBR1Q8WVP7 490 aa15.12■□□□□ 0.01
RPS28-204ENST00000602140 GPRASP2Q96D09 838 aa15.12■□□□□ 0.01
RPS28-204ENST00000602140 C17orf80Q9BSJ5 609 aa15.12■□□□□ 0.01
RPS28-204ENST00000602140 ANO2Q9NQ90 1003 aa15.12■□□□□ 0.01
RPS28-204ENST00000602140 UPP2O95045 317 aa15.11■□□□□ 0.01
RPS28-204ENST00000602140 KCNA2P16389 499 aa15.11■□□□□ 0.01
RPS28-204ENST00000602140 ITGB5P18084 799 aa15.11■□□□□ 0.01
RPS28-204ENST00000602140 COL9A1P20849 921 aa15.11■□□□□ 0.01
RPS28-204ENST00000602140 MICU3Q86XE3 530 aa15.11■□□□□ 0.01
RPS28-204ENST00000602140 FBXO22Q8NEZ5 403 aa15.11■□□□□ 0.01
RPS28-204ENST00000602140 SP7Q8TDD2 431 aaPredicted RBP15.11■□□□□ 0.01
RPS28-204ENST00000602140 CDHR1Q96JP9 859 aa15.11■□□□□ 0.01
RPS28-204ENST00000602140 PKD2L1Q9P0L9 805 aa15.11■□□□□ 0.01
RPS28-204ENST00000602140 NRCAMQ92823 1304 aa15.11■□□□□ 0.01
RPS28-204ENST00000602140 MICAL3Q7RTP6 2002 aa15.1■□□□□ 0.01
RPS28-204ENST00000602140 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.1■□□□□ 0.01
RPS28-204ENST00000602140 GSTTP1A0A1W2PQM5 241 aa15.1■□□□□ 0.01
RPS28-204ENST00000602140 SPDYE3A6NKU9 549 aa15.1■□□□□ 0.01
RPS28-204ENST00000602140 MARK3P27448 753 aa15.1■□□□□ 0.01
RPS28-204ENST00000602140 MTMR1Q13613 665 aa15.1■□□□□ 0.01
RPS28-204ENST00000602140 FAM26DQ5JW98 314 aa15.1■□□□□ 0.01
RPS28-204ENST00000602140 TMTC3Q6ZXV5 915 aa15.1■□□□□ 0.01
RPS28-204ENST00000602140 HEATR3Q7Z4Q2 680 aa15.1■□□□□ 0.01
RPS28-204ENST00000602140 SEPT1Q8WYJ6 367 aa15.1■□□□□ 0.01
RPS28-204ENST00000602140 TOP1MTQ969P6 601 aa15.1■□□□□ 0.01
RPS28-204ENST00000602140 YME1L1Q96TA2 773 aa15.1■□□□□ 0.01
RPS28-204ENST00000602140 PCDHA6Q9UN73 950 aa15.1■□□□□ 0.01
RPS28-204ENST00000602140 PCDHA8Q9Y5H6 950 aa15.1■□□□□ 0.01
RPS28-204ENST00000602140 UBIAD1Q9Y5Z9 338 aa15.1■□□□□ 0.01
RPS28-204ENST00000602140 SIP14410 1827 aa15.1■□□□□ 0.01
RPS28-204ENST00000602140 CHRNA1P02708 482 aa15.09■□□□□ 0.01
RPS28-204ENST00000602140 PPFIA1Q13136 1202 aa15.09■□□□□ 0.01
RPS28-204ENST00000602140 SYNE3Q6ZMZ3 975 aa15.09■□□□□ 0.01
RPS28-204ENST00000602140 RUFY4Q6ZNE9 571 aa15.09■□□□□ 0.01
RPS28-204ENST00000602140 SGMS1Q86VZ5 419 aa15.09■□□□□ 0.01
RPS28-204ENST00000602140 APBB2Q92870 758 aa15.09■□□□□ 0.01
RPS28-204ENST00000602140 GLG1Q92896 1179 aa15.09■□□□□ 0.01
RPS28-204ENST00000602140 IFIH1Q9BYX4 1025 aaKnown RBP15.09■□□□□ 0.01
RPS28-204ENST00000602140 JADE2Q9NQC1 790 aa15.09■□□□□ 0.01
RPS28-204ENST00000602140 MAFGO15525 162 aa15.08■□□□□ 0
RPS28-204ENST00000602140 GHRP10912 638 aa15.08■□□□□ 0
RPS28-204ENST00000602140 GRIK4Q16099 956 aa15.08■□□□□ 0
RPS28-204ENST00000602140 EPC2Q52LR7 807 aa15.08■□□□□ 0
RPS28-204ENST00000602140 TAF2Q6P1X5 1199 aa15.08■□□□□ 0
RPS28-204ENST00000602140 RPAINQ86UA6 219 aa15.08■□□□□ 0
RPS28-204ENST00000602140 SAMD11Q96NU1 681 aa15.08■□□□□ 0
RPS28-204ENST00000602140 SMARCAD1Q9H4L7 1026 aa15.08■□□□□ 0
RPS28-204ENST00000602140 ERAP1Q9NZ08 941 aa15.08■□□□□ 0
RPS28-204ENST00000602140 NCOR1O75376 2440 aa15.08■□□□□ 0
RPS28-204ENST00000602140 RNF20Q5VTR2 975 aa15.07■□□□□ 0
RPS28-204ENST00000602140 WWC2Q6AWC2 1192 aa15.07■□□□□ 0
RPS28-204ENST00000602140 APOA5Q6Q788 366 aa15.07■□□□□ 0
RPS28-204ENST00000602140 RSPH3Q86UC2 560 aa15.07■□□□□ 0
RPS28-204ENST00000602140 SKAP1Q86WV1 359 aa15.07■□□□□ 0
RPS28-204ENST00000602140 DNAJB3Q8WWF6 145 aa15.07■□□□□ 0
RPS28-204ENST00000602140 MRPL38Q96DV4 380 aaKnown RBP15.07■□□□□ 0
RPS28-204ENST00000602140 TCEANC2Q96MN5 208 aa15.07■□□□□ 0
RPS28-204ENST00000602140 NEK1Q96PY6 1258 aa15.07■□□□□ 0
RPS28-204ENST00000602140 UBE2ZQ9H832 354 aaPredicted RBP15.07■□□□□ 0
RPS28-204ENST00000602140 EHMT1Q9H9B1 1298 aa15.07■□□□□ 0
RPS28-204ENST00000602140 RAPGEFL1Q9UHV5 662 aa15.07■□□□□ 0
RPS28-204ENST00000602140 TUBE1Q9UJT0 475 aa15.07■□□□□ 0
RPS28-204ENST00000602140 CNTNAP5Q8WYK1 1306 aa15.07■□□□□ 0
RPS28-204ENST00000602140 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.06■□□□□ 0
RPS28-204ENST00000602140 NAPAP54920 295 aa15.06■□□□□ 0
RPS28-204ENST00000602140 IGBP1P78318 339 aa15.06■□□□□ 0
RPS28-204ENST00000602140 MGAT3Q09327 533 aa15.06■□□□□ 0
RPS28-204ENST00000602140 LPIN1Q14693 890 aa15.06■□□□□ 0
RPS28-204ENST00000602140 BMP2KLQ5H9B9 411 aa15.06■□□□□ 0
RPS28-204ENST00000602140 MARCH8Q5T0T0 291 aa15.06■□□□□ 0
RPS28-204ENST00000602140 TYW1BQ6NUM6 668 aa15.06■□□□□ 0
RPS28-204ENST00000602140 TMEM192Q8IY95 271 aa15.06■□□□□ 0
RPS28-204ENST00000602140 CYP2W1Q8TAV3 490 aa15.06■□□□□ 0
RPS28-204ENST00000602140 PGBD1Q96JS3 809 aa15.06■□□□□ 0
RPS28-204ENST00000602140 MXRA8Q9BRK3 442 aa15.06■□□□□ 0
RPS28-204ENST00000602140 JPH1Q9HDC5 661 aaPredicted RBP15.06■□□□□ 0
RPS28-204ENST00000602140 KCNH7Q9NS40 1196 aa15.06■□□□□ 0
RPS28-204ENST00000602140 RBM28Q9NW13 759 aaKnown RBP15.06■□□□□ 0
RPS28-204ENST00000602140 MBLAC1A4D2B0 266 aaPredicted RBP15.05■□□□□ -0
RPS28-204ENST00000602140 H3BNC9 293 aa15.05■□□□□ -0
RPS28-204ENST00000602140 INSRRP14616 1297 aa15.05■□□□□ -0
RPS28-204ENST00000602140 KCNA5P22460 613 aa15.05■□□□□ -0
RPS28-204ENST00000602140 EXOSC10Q01780 885 aaKnown RBP15.05■□□□□ -0
RPS28-204ENST00000602140 GPM6BQ13491 265 aa15.05■□□□□ -0
RPS28-204ENST00000602140 RTN1Q16799 776 aa15.05■□□□□ -0
RPS28-204ENST00000602140 PTPROQ16827 1216 aa15.05■□□□□ -0
RPS28-204ENST00000602140 ZBTB10Q96DT7 871 aa15.05■□□□□ -0
RPS28-204ENST00000602140 IL17RAQ96F46 866 aa15.05■□□□□ -0
RPS28-204ENST00000602140 PCYT2Q99447 389 aa15.05■□□□□ -0
RPS28-204ENST00000602140 C1QTNF1Q9BXJ1 281 aa15.05■□□□□ -0
RPS28-204ENST00000602140 RIC8AQ9NPQ8 531 aa15.05■□□□□ -0
RPS28-204ENST00000602140 SLC9A2Q9UBY0 812 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms