RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 ECM1Q16610 540 aa25.28■■□□□ 1.64
IRF3-228ENST00000601291 SV2BQ7L1I2 683 aa25.28■■□□□ 1.64
IRF3-228ENST00000601291 SMAP1Q8IYB5 467 aaPredicted RBP25.28■■□□□ 1.64
IRF3-228ENST00000601291 MSL3Q8N5Y2 521 aaKnown RBP25.28■■□□□ 1.64
IRF3-228ENST00000601291 SMARCE1Q969G3 411 aa25.28■■□□□ 1.64
IRF3-228ENST00000601291 DYDC2Q96IM9 177 aa25.28■■□□□ 1.64
IRF3-228ENST00000601291 HSD17B14Q9BPX1 270 aa25.28■■□□□ 1.64
IRF3-228ENST00000601291 FUCA2Q9BTY2 467 aa25.28■■□□□ 1.64
IRF3-228ENST00000601291 KBTBD4Q9NVX7 518 aa25.28■■□□□ 1.64
IRF3-228ENST00000601291 SLC9A2Q9UBY0 812 aa25.28■■□□□ 1.64
IRF3-228ENST00000601291 POTEFA5A3E0 1075 aa25.27■■□□□ 1.64
IRF3-228ENST00000601291 FCGRTP55899 365 aa25.27■■□□□ 1.64
IRF3-228ENST00000601291 NEDD9Q14511 834 aa25.27■■□□□ 1.64
IRF3-228ENST00000601291 POTEGQ6S5H5 508 aa25.27■■□□□ 1.64
IRF3-228ENST00000601291 FBXO16Q8IX29 292 aaPredicted RBP25.27■■□□□ 1.64
IRF3-228ENST00000601291 CFHR5Q9BXR6 569 aa25.27■■□□□ 1.64
IRF3-228ENST00000601291 LRRC27Q9C0I9 530 aa25.27■■□□□ 1.64
IRF3-228ENST00000601291 VTA1Q9NP79 307 aa25.27■■□□□ 1.64
IRF3-228ENST00000601291 BLOC1S4Q9NUP1 217 aa25.27■■□□□ 1.64
IRF3-228ENST00000601291 TUBE1Q9UJT0 475 aa25.27■■□□□ 1.64
IRF3-228ENST00000601291 PCDHA5Q9Y5H7 936 aa25.27■■□□□ 1.64
IRF3-228ENST00000601291 SYNGAP1Q96PV0 1343 aa25.27■■□□□ 1.64
IRF3-228ENST00000601291 UBA1P22314 1058 aaKnown RBP25.27■■□□□ 1.64
IRF3-228ENST00000601291 RGS2P41220 211 aa25.27■■□□□ 1.64
IRF3-228ENST00000601291 LRRC15Q8TF66 581 aa25.27■■□□□ 1.64
IRF3-228ENST00000601291 STAMQ92783 540 aa25.27■■□□□ 1.64
IRF3-228ENST00000601291 RGL1Q9NZL6 768 aa25.27■■□□□ 1.64
IRF3-228ENST00000601291 DNM3Q9UQ16 869 aa25.27■■□□□ 1.64
IRF3-228ENST00000601291 KIAA1217Q5T5P2 1943 aa25.26■■□□□ 1.63
IRF3-228ENST00000601291 P4HBP07237 508 aaKnown RBP25.26■■□□□ 1.63
IRF3-228ENST00000601291 HOXC6P09630 235 aa25.26■■□□□ 1.63
IRF3-228ENST00000601291 DPYDQ12882 1025 aa25.26■■□□□ 1.63
IRF3-228ENST00000601291 STX1AQ16623 288 aa25.26■■□□□ 1.63
IRF3-228ENST00000601291 TPH2Q8IWU9 490 aa25.26■■□□□ 1.63
IRF3-228ENST00000601291 NPLOC4Q8TAT6 608 aa25.26■■□□□ 1.63
IRF3-228ENST00000601291 CDKN2AIPQ9NXV6 580 aaPredicted RBP25.26■■□□□ 1.63
IRF3-228ENST00000601291 SLITRK3O94933 977 aa25.25■■□□□ 1.63
IRF3-228ENST00000601291 CCNE2O96020 404 aa25.25■■□□□ 1.63
IRF3-228ENST00000601291 HTRA3P83110 453 aa25.25■■□□□ 1.63
IRF3-228ENST00000601291 LACTBP83111 547 aaPredicted RBP25.25■■□□□ 1.63
IRF3-228ENST00000601291 SP2Q02086 613 aa25.25■■□□□ 1.63
IRF3-228ENST00000601291 CTTNQ14247 550 aaKnown RBP25.25■■□□□ 1.63
IRF3-228ENST00000601291 TTLL4Q14679 1199 aa25.25■■□□□ 1.63
IRF3-228ENST00000601291 NT5DC1Q5TFE4 455 aa25.25■■□□□ 1.63
IRF3-228ENST00000601291 KCNK18Q7Z418 384 aa25.25■■□□□ 1.63
IRF3-228ENST00000601291 SCFD2Q8WU76 684 aa25.25■■□□□ 1.63
IRF3-228ENST00000601291 MTRQ99707 1265 aa25.25■■□□□ 1.63
IRF3-228ENST00000601291 APBA2Q99767 749 aa25.25■■□□□ 1.63
IRF3-228ENST00000601291 LXNQ9BS40 222 aa25.25■■□□□ 1.63
IRF3-228ENST00000601291 TINF2Q9BSI4 451 aa25.25■■□□□ 1.63
IRF3-228ENST00000601291 PCDHA10Q9Y5I2 948 aa25.25■■□□□ 1.63
IRF3-228ENST00000601291 THSD7BQ9C0I4 1608 aa25.25■■□□□ 1.63
IRF3-228ENST00000601291 E9PMD0 336 aa25.24■■□□□ 1.63
IRF3-228ENST00000601291 TBC1D8O95759 1140 aa25.24■■□□□ 1.63
IRF3-228ENST00000601291 MCM6Q14566 821 aa25.24■■□□□ 1.63
IRF3-228ENST00000601291 KIF22Q14807 665 aa25.24■■□□□ 1.63
IRF3-228ENST00000601291 CYFIP1Q7L576 1253 aa25.24■■□□□ 1.63
IRF3-228ENST00000601291 USP6NLQ92738 828 aa25.24■■□□□ 1.63
IRF3-228ENST00000601291 BLZF1Q9H2G9 400 aa25.24■■□□□ 1.63
IRF3-228ENST00000601291 ANO10Q9NW15 660 aa25.24■■□□□ 1.63
IRF3-228ENST00000601291 RNF186Q9NXI6 227 aa25.24■■□□□ 1.63
IRF3-228ENST00000601291 CUL4BQ13620 913 aa25.23■■□□□ 1.63
IRF3-228ENST00000601291 DHX8Q14562 1220 aaKnown RBP25.23■■□□□ 1.63
IRF3-228ENST00000601291 BANK1Q8NDB2 785 aa25.23■■□□□ 1.63
IRF3-228ENST00000601291 SPATA20Q8TB22 786 aa25.23■■□□□ 1.63
IRF3-228ENST00000601291 GSDMAQ96QA5 445 aa25.23■■□□□ 1.63
IRF3-228ENST00000601291 ZSWIM4Q9H7M6 989 aa25.23■■□□□ 1.63
IRF3-228ENST00000601291 DDX41Q9UJV9 622 aaKnown RBP25.23■■□□□ 1.63
IRF3-228ENST00000601291 GOLGA6L3A6NEY3 463 aa25.22■■□□□ 1.63
IRF3-228ENST00000601291 BIN1O00499 593 aa25.22■■□□□ 1.63
IRF3-228ENST00000601291 TRPA1O75762 1119 aa25.22■■□□□ 1.63
IRF3-228ENST00000601291 PSAPP07602 524 aa25.22■■□□□ 1.63
IRF3-228ENST00000601291 PLA2G4BP0C869 781 aa25.22■■□□□ 1.63
IRF3-228ENST00000601291 PSMC4P43686 418 aa25.22■■□□□ 1.63
IRF3-228ENST00000601291 QARSP47897 775 aaKnown RBP25.22■■□□□ 1.63
IRF3-228ENST00000601291 SARSP49591 514 aaKnown RBP25.22■■□□□ 1.63
IRF3-228ENST00000601291 ACTR2P61160 394 aa25.22■■□□□ 1.63
IRF3-228ENST00000601291 SP4Q02446 784 aa25.22■■□□□ 1.63
IRF3-228ENST00000601291 SP3Q02447 781 aa25.22■■□□□ 1.63
IRF3-228ENST00000601291 MIS18BP1Q6P0N0 1132 aa25.22■■□□□ 1.63
IRF3-228ENST00000601291 GAS2L3Q86XJ1 694 aa25.22■■□□□ 1.63
IRF3-228ENST00000601291 TRIML1Q8N9V2 468 aa25.22■■□□□ 1.63
IRF3-228ENST00000601291 NACC1Q96RE7 527 aa25.22■■□□□ 1.63
IRF3-228ENST00000601291 ABHD16BQ9H3Z7 469 aa25.22■■□□□ 1.63
IRF3-228ENST00000601291 FARP2O94887 1054 aaPredicted RBP25.22■■□□□ 1.63
IRF3-228ENST00000601291 GGPS1O95749 300 aa25.22■■□□□ 1.63
IRF3-228ENST00000601291 SNAI1O95863 264 aaPredicted RBP25.22■■□□□ 1.63
IRF3-228ENST00000601291 SSBP05455 408 aaKnown RBP eCLIP25.22■■□□□ 1.63
IRF3-228ENST00000601291 TXNP10599 105 aaKnown RBP25.22■■□□□ 1.63
IRF3-228ENST00000601291 CASP1P29466 404 aa25.22■■□□□ 1.63
IRF3-228ENST00000601291 LY6KQ17RY6 165 aa25.22■■□□□ 1.63
IRF3-228ENST00000601291 METTL7BQ6UX53 244 aa25.22■■□□□ 1.63
IRF3-228ENST00000601291 C7orf25Q9BPX7 421 aa25.22■■□□□ 1.63
IRF3-228ENST00000601291 TRIM9Q9C026 710 aa25.22■■□□□ 1.63
IRF3-228ENST00000601291 MLXIPQ9HAP2 919 aa25.22■■□□□ 1.63
IRF3-228ENST00000601291 RMND1Q9NWS8 449 aa25.22■■□□□ 1.63
IRF3-228ENST00000601291 GJD2Q9UKL4 321 aa25.22■■□□□ 1.63
IRF3-228ENST00000601291 DKC1O60832 514 aaKnown RBP eCLIP25.21■■□□□ 1.639e-9■■■□□ 15.7
IRF3-228ENST00000601291 ARIH2O95376 493 aa25.21■■□□□ 1.63
IRF3-228ENST00000601291 EYA4O95677 639 aa25.21■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms