RNA–Protein interactions for RNA: ENST00000597776.1

LSM4-205, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, human

TSL 2

Gene LSM4, Length 446 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LSM4-205	ENST00000597776	NLRX1	Q86UT6	975 aa		12.11	□□□□□ -0.47
LSM4-205	ENST00000597776	SKAP1	Q86WV1	359 aa		12.11	□□□□□ -0.47
LSM4-205	ENST00000597776	FBXO22	Q8NEZ5	403 aa		12.11	□□□□□ -0.47
LSM4-205	ENST00000597776	SEPT8	Q92599	483 aa		12.11	□□□□□ -0.47
LSM4-205	ENST00000597776	SENP7	Q9BQF6	1050 aa		12.11	□□□□□ -0.47
LSM4-205	ENST00000597776	MTA3	Q9BTC8	594 aa		12.11	□□□□□ -0.47
LSM4-205	ENST00000597776	PSTPIP2	Q9H939	334 aa		12.11	□□□□□ -0.47
LSM4-205	ENST00000597776	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	12.1	□□□□□ -0.47
LSM4-205	ENST00000597776	CAND2	O75155	1236 aa		12.1	□□□□□ -0.47
LSM4-205	ENST00000597776	UPP2	O95045	317 aa		12.1	□□□□□ -0.47
LSM4-205	ENST00000597776	MARK3	P27448	753 aa		12.1	□□□□□ -0.47
LSM4-205	ENST00000597776	HTRA4	P83105	476 aa	Predicted RBP	12.1	□□□□□ -0.47
LSM4-205	ENST00000597776	NECTIN1	Q15223	517 aa		12.1	□□□□□ -0.47
LSM4-205	ENST00000597776	TMTC3	Q6ZXV5	915 aa		12.1	□□□□□ -0.47
LSM4-205	ENST00000597776	HEATR3	Q7Z4Q2	680 aa		12.1	□□□□□ -0.47
LSM4-205	ENST00000597776	MICU3	Q86XE3	530 aa		12.1	□□□□□ -0.47
LSM4-205	ENST00000597776	TMTC2	Q8N394	836 aa		12.1	□□□□□ -0.47
LSM4-205	ENST00000597776	SP7	Q8TDD2	431 aa	Predicted RBP	12.1	□□□□□ -0.47
LSM4-205	ENST00000597776	GPRASP2	Q96D09	838 aa		12.1	□□□□□ -0.47
LSM4-205	ENST00000597776	YME1L1	Q96TA2	773 aa		12.1	□□□□□ -0.47
LSM4-205	ENST00000597776	ANO2	Q9NQ90	1003 aa		12.1	□□□□□ -0.47
LSM4-205	ENST00000597776	LMCD1	Q9NZU5	365 aa		12.1	□□□□□ -0.47
LSM4-205	ENST00000597776	SLC12A7	Q9Y666	1083 aa		12.1	□□□□□ -0.47
LSM4-205	ENST00000597776	NCOR1	O75376	2440 aa		12.1	□□□□□ -0.47
LSM4-205	ENST00000597776	GSTTP1	A0A1W2PQM5	241 aa		12.09	□□□□□ -0.47
LSM4-205	ENST00000597776	CHRNA1	P02708	482 aa		12.09	□□□□□ -0.47
LSM4-205	ENST00000597776	CALM1	P0DP23	149 aa		12.09	□□□□□ -0.47
LSM4-205	ENST00000597776	CALM2	P0DP24	149 aa		12.09	□□□□□ -0.47
LSM4-205	ENST00000597776	CALM3	P0DP25	149 aa		12.09	□□□□□ -0.47
LSM4-205	ENST00000597776	LIFR	P42702	1097 aa		12.09	□□□□□ -0.47
LSM4-205	ENST00000597776	MTMR1	Q13613	665 aa		12.09	□□□□□ -0.47
LSM4-205	ENST00000597776	FAM26D	Q5JW98	314 aa		12.09	□□□□□ -0.47
LSM4-205	ENST00000597776	FANCB	Q8NB91	859 aa		12.09	□□□□□ -0.47
LSM4-205	ENST00000597776	GIMAP8	Q8ND71	665 aa	Predicted RBP	12.09	□□□□□ -0.47
LSM4-205	ENST00000597776	IFIH1	Q9BYX4	1025 aa	Known RBP	12.09	□□□□□ -0.47
LSM4-205	ENST00000597776	PCDHA6	Q9UN73	950 aa		12.09	□□□□□ -0.47
LSM4-205	ENST00000597776	PCDHA8	Q9Y5H6	950 aa		12.09	□□□□□ -0.47
LSM4-205	ENST00000597776	UBIAD1	Q9Y5Z9	338 aa		12.09	□□□□□ -0.47
LSM4-205	ENST00000597776	NRCAM	Q92823	1304 aa		12.09	□□□□□ -0.47
LSM4-205	ENST00000597776	SPDYE3	A6NKU9	549 aa		12.08	□□□□□ -0.48
LSM4-205	ENST00000597776	GHR	P10912	638 aa		12.08	□□□□□ -0.48
LSM4-205	ENST00000597776	PPFIA1	Q13136	1202 aa		12.08	□□□□□ -0.48
LSM4-205	ENST00000597776	GRIK4	Q16099	956 aa		12.08	□□□□□ -0.48
LSM4-205	ENST00000597776	EPC2	Q52LR7	807 aa		12.08	□□□□□ -0.48
LSM4-205	ENST00000597776	TOP1MT	Q969P6	601 aa		12.08	□□□□□ -0.48
LSM4-205	ENST00000597776	ZBTB10	Q96DT7	871 aa		12.08	□□□□□ -0.48
LSM4-205	ENST00000597776	CDHR1	Q96JP9	859 aa		12.08	□□□□□ -0.48
LSM4-205	ENST00000597776	TCEANC2	Q96MN5	208 aa		12.08	□□□□□ -0.48
LSM4-205	ENST00000597776	UBE2Z	Q9H832	354 aa	Predicted RBP	12.08	□□□□□ -0.48
LSM4-205	ENST00000597776	CNTNAP5	Q8WYK1	1306 aa		12.08	□□□□□ -0.48
LSM4-205	ENST00000597776	KCNA5	P22460	613 aa		12.07	□□□□□ -0.48
LSM4-205	ENST00000597776	IGBP1	P78318	339 aa		12.07	□□□□□ -0.48
LSM4-205	ENST00000597776	MGAT3	Q09327	533 aa		12.07	□□□□□ -0.48
LSM4-205	ENST00000597776	LPIN1	Q14693	890 aa		12.07	□□□□□ -0.48
LSM4-205	ENST00000597776	MARCH8	Q5T0T0	291 aa		12.07	□□□□□ -0.48
LSM4-205	ENST00000597776	WWC2	Q6AWC2	1192 aa		12.07	□□□□□ -0.48
LSM4-205	ENST00000597776	TYW1B	Q6NUM6	668 aa		12.07	□□□□□ -0.48
LSM4-205	ENST00000597776	APOA5	Q6Q788	366 aa		12.07	□□□□□ -0.48
LSM4-205	ENST00000597776	SGMS1	Q86VZ5	419 aa		12.07	□□□□□ -0.48
LSM4-205	ENST00000597776	CYP2W1	Q8TAV3	490 aa		12.07	□□□□□ -0.48
LSM4-205	ENST00000597776	DNAJB3	Q8WWF6	145 aa		12.07	□□□□□ -0.48
LSM4-205	ENST00000597776	SEPT1	Q8WYJ6	367 aa		12.07	□□□□□ -0.48
LSM4-205	ENST00000597776	APBB2	Q92870	758 aa		12.07	□□□□□ -0.48
LSM4-205	ENST00000597776	GLG1	Q92896	1179 aa		12.07	□□□□□ -0.48
LSM4-205	ENST00000597776	KHSRP	Q92945	711 aa	Known RBP eCLIP	12.07	□□□□□ -0.48
LSM4-205	ENST00000597776	MRPL38	Q96DV4	380 aa	Known RBP	12.07	□□□□□ -0.48
LSM4-205	ENST00000597776	PGBD1	Q96JS3	809 aa		12.07	□□□□□ -0.48
LSM4-205	ENST00000597776	JADE2	Q9NQC1	790 aa		12.07	□□□□□ -0.48
LSM4-205	ENST00000597776	ERAP1	Q9NZ08	941 aa		12.07	□□□□□ -0.48
LSM4-205	ENST00000597776	TUBE1	Q9UJT0	475 aa		12.07	□□□□□ -0.48
LSM4-205	ENST00000597776	BRWD1	Q9NSI6	2320 aa		12.06	□□□□□ -0.48
LSM4-205	ENST00000597776	TAF2	Q6P1X5	1199 aa		12.06	□□□□□ -0.48
LSM4-205	ENST00000597776	RPAIN	Q86UA6	219 aa		12.06	□□□□□ -0.48
LSM4-205	ENST00000597776	TMEM192	Q8IY95	271 aa		12.06	□□□□□ -0.48
LSM4-205	ENST00000597776	SAMD11	Q96NU1	681 aa		12.06	□□□□□ -0.48
LSM4-205	ENST00000597776	PCYT2	Q99447	389 aa		12.06	□□□□□ -0.48
LSM4-205	ENST00000597776	SMARCAD1	Q9H4L7	1026 aa		12.06	□□□□□ -0.48
LSM4-205	ENST00000597776	EPHX3	Q9H6B9	360 aa		12.06	□□□□□ -0.48
LSM4-205	ENST00000597776	EHMT1	Q9H9B1	1298 aa		12.06	□□□□□ -0.48
LSM4-205	ENST00000597776	JPH1	Q9HDC5	661 aa	Predicted RBP	12.06	□□□□□ -0.48
LSM4-205	ENST00000597776	CD320	Q9NPF0	282 aa		12.06	□□□□□ -0.48
LSM4-205	ENST00000597776	BRPF3	Q9ULD4	1205 aa		12.06	□□□□□ -0.48
LSM4-205	ENST00000597776	CDY2A	Q9Y6F7	541 aa		12.06	□□□□□ -0.48
LSM4-205	ENST00000597776	COL4A6	Q14031	1691 aa		12.06	□□□□□ -0.48
LSM4-205	ENST00000597776	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	12.05	□□□□□ -0.48
LSM4-205	ENST00000597776	MBLAC1	A4D2B0	266 aa	Predicted RBP	12.05	□□□□□ -0.48
LSM4-205	ENST00000597776		H3BNC9	293 aa		12.05	□□□□□ -0.48
LSM4-205	ENST00000597776	NAPA	P54920	295 aa		12.05	□□□□□ -0.48
LSM4-205	ENST00000597776	FUT2	Q10981	343 aa		12.05	□□□□□ -0.48
LSM4-205	ENST00000597776	GPM6B	Q13491	265 aa		12.05	□□□□□ -0.48
LSM4-205	ENST00000597776	RTN1	Q16799	776 aa		12.05	□□□□□ -0.48
LSM4-205	ENST00000597776	PTPRO	Q16827	1216 aa		12.05	□□□□□ -0.48
LSM4-205	ENST00000597776	ADCK5	Q3MIX3	580 aa		12.05	□□□□□ -0.48
LSM4-205	ENST00000597776	BMP2KL	Q5H9B9	411 aa		12.05	□□□□□ -0.48
LSM4-205	ENST00000597776	FBXO47	Q5MNV8	452 aa		12.05	□□□□□ -0.48
LSM4-205	ENST00000597776	SYNE3	Q6ZMZ3	975 aa		12.05	□□□□□ -0.48
LSM4-205	ENST00000597776	RSPH3	Q86UC2	560 aa		12.05	□□□□□ -0.48
LSM4-205	ENST00000597776	RASEF	Q8IZ41	740 aa		12.05	□□□□□ -0.48
LSM4-205	ENST00000597776	TRAPPC12	Q8WVT3	735 aa		12.05	□□□□□ -0.48
LSM4-205	ENST00000597776	IL17RA	Q96F46	866 aa		12.05	□□□□□ -0.48

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