RNA–Protein interactions for RNA: ENST00000594724.5

USE1-205, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 3

Gene USE1, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-205ENST00000594724 SETD4Q9NVD3 440 aa16.82■□□□□ 0.28
USE1-205ENST00000594724 SLC9A2Q9UBY0 812 aa16.82■□□□□ 0.28
USE1-205ENST00000594724 ZBBXA8MT70 800 aa16.81■□□□□ 0.28
USE1-205ENST00000594724 TREHO43280 583 aa16.81■□□□□ 0.28
USE1-205ENST00000594724 PFKFB2O60825 505 aa16.81■□□□□ 0.28
USE1-205ENST00000594724 CYP3A4P08684 503 aa16.81■□□□□ 0.28
USE1-205ENST00000594724 SELPP16109 830 aa16.81■□□□□ 0.28
USE1-205ENST00000594724 MARK3P27448 753 aa16.81■□□□□ 0.28
USE1-205ENST00000594724 NEK4P51957 841 aa16.81■□□□□ 0.28
USE1-205ENST00000594724 GPNMBQ14956 572 aa16.81■□□□□ 0.28
USE1-205ENST00000594724 TRIM71Q2Q1W2 868 aaKnown RBP16.81■□□□□ 0.28
USE1-205ENST00000594724 ZNF697Q5TEC3 545 aa16.81■□□□□ 0.28
USE1-205ENST00000594724 MCTP2Q6DN12 878 aa16.81■□□□□ 0.28
USE1-205ENST00000594724 BICD2Q8TD16 824 aa16.81■□□□□ 0.28
USE1-205ENST00000594724 AFAP1L1Q8TED9 768 aa16.81■□□□□ 0.28
USE1-205ENST00000594724 FTOQ9C0B1 505 aaKnown RBP eCLIP16.81■□□□□ 0.28
USE1-205ENST00000594724 SEMA6BQ9H3T3 888 aa16.81■□□□□ 0.28
USE1-205ENST00000594724 JPH1Q9HDC5 661 aaPredicted RBP16.81■□□□□ 0.28
USE1-205ENST00000594724 ZNF215Q9UL58 517 aaPredicted RBP16.81■□□□□ 0.28
USE1-205ENST00000594724 SCN5AQ14524 2016 aa16.8■□□□□ 0.28
USE1-205ENST00000594724 NFASCO94856 1347 aa16.8■□□□□ 0.28
USE1-205ENST00000594724 IGLV3-22A0A075B6J6 115 aa16.8■□□□□ 0.28
USE1-205ENST00000594724 DDX39AO00148 427 aaKnown RBP16.8■□□□□ 0.28
USE1-205ENST00000594724 PFKMP08237 780 aa16.8■□□□□ 0.28
USE1-205ENST00000594724 HOXC8P31273 242 aa16.8■□□□□ 0.28
USE1-205ENST00000594724 RFC2P35250 354 aa16.8■□□□□ 0.28
USE1-205ENST00000594724 PBX2P40425 430 aa16.8■□□□□ 0.28
USE1-205ENST00000594724 RBL2Q08999 1139 aa16.8■□□□□ 0.28
USE1-205ENST00000594724 ANKRD1Q15327 319 aa16.8■□□□□ 0.28
USE1-205ENST00000594724 ZNF618Q5T7W0 954 aa16.8■□□□□ 0.28
USE1-205ENST00000594724 LRRC8DQ7L1W4 858 aa16.8■□□□□ 0.28
USE1-205ENST00000594724 NIPA1Q7RTP0 329 aa16.8■□□□□ 0.28
USE1-205ENST00000594724 SERINC5Q86VE9 423 aa16.8■□□□□ 0.28
USE1-205ENST00000594724 NECAB1Q8N987 351 aa16.8■□□□□ 0.28
USE1-205ENST00000594724 GLG1Q92896 1179 aa16.8■□□□□ 0.28
USE1-205ENST00000594724 PCYT2Q99447 389 aa16.8■□□□□ 0.28
USE1-205ENST00000594724 SDF4Q9BRK5 362 aa16.8■□□□□ 0.28
USE1-205ENST00000594724 MTIF3Q9H2K0 278 aaKnown RBP16.8■□□□□ 0.28
USE1-205ENST00000594724 TTYH1Q9H313 450 aaPredicted RBP16.8■□□□□ 0.28
USE1-205ENST00000594724 TRIP12Q14669 1992 aaPredicted RBP16.79■□□□□ 0.28
USE1-205ENST00000594724 EDIL3O43854 480 aa16.79■□□□□ 0.28
USE1-205ENST00000594724 LARGE1O95461 756 aa16.79■□□□□ 0.28
USE1-205ENST00000594724 DNAJB2P25686 324 aa16.79■□□□□ 0.28
USE1-205ENST00000594724 THPOP40225 353 aa16.79■□□□□ 0.28
USE1-205ENST00000594724 ACTR2P61160 394 aa16.79■□□□□ 0.28
USE1-205ENST00000594724 ME3Q16798 604 aa16.79■□□□□ 0.28
USE1-205ENST00000594724 C8orf34Q49A92 452 aa16.79■□□□□ 0.28
USE1-205ENST00000594724 TRAF7Q6Q0C0 670 aa16.79■□□□□ 0.28
USE1-205ENST00000594724 GUCD1Q96NT3 240 aa16.79■□□□□ 0.28
USE1-205ENST00000594724 PBX4Q9BYU1 374 aa16.79■□□□□ 0.28
USE1-205ENST00000594724 SMARCAD1Q9H4L7 1026 aa16.79■□□□□ 0.28
USE1-205ENST00000594724 PCDHA4Q9UN74 947 aa16.79■□□□□ 0.28
USE1-205ENST00000594724 SLC4A7Q9Y6M7 1214 aa16.79■□□□□ 0.28
USE1-205ENST00000594724 NBNO60934 754 aa16.78■□□□□ 0.28
USE1-205ENST00000594724 CDKL5O76039 1030 aa16.78■□□□□ 0.28
USE1-205ENST00000594724 CTDNEP1O95476 244 aa16.78■□□□□ 0.28
USE1-205ENST00000594724 GNAT1P11488 350 aa16.78■□□□□ 0.28
USE1-205ENST00000594724 ACTN1P12814 892 aa16.78■□□□□ 0.28
USE1-205ENST00000594724 ADAM17P78536 824 aa16.78■□□□□ 0.28
USE1-205ENST00000594724 LMBR1Q8WVP7 490 aa16.78■□□□□ 0.28
USE1-205ENST00000594724 ERAP1Q9NZ08 941 aa16.78■□□□□ 0.28
USE1-205ENST00000594724 KCNJ14Q9UNX9 436 aa16.78■□□□□ 0.28
USE1-205ENST00000594724 IPO5O00410 1097 aaKnown RBP16.77■□□□□ 0.28
USE1-205ENST00000594724 DHX15O43143 795 aaKnown RBP16.77■□□□□ 0.28
USE1-205ENST00000594724 LGR5O75473 907 aa16.77■□□□□ 0.28
USE1-205ENST00000594724 CCNE2O96020 404 aa16.77■□□□□ 0.28
USE1-205ENST00000594724 CIITAP33076 1130 aa16.77■□□□□ 0.28
USE1-205ENST00000594724 RABGGTBP53611 331 aa16.77■□□□□ 0.28
USE1-205ENST00000594724 MBTPS1Q14703 1052 aa16.77■□□□□ 0.28
USE1-205ENST00000594724 NPY5RQ15761 445 aa16.77■□□□□ 0.28
USE1-205ENST00000594724 PRR16Q569H4 304 aa16.77■□□□□ 0.28
USE1-205ENST00000594724 BLIDQ8IZY5 108 aa16.77■□□□□ 0.28
USE1-205ENST00000594724 TBCKQ8TEA7 893 aa16.77■□□□□ 0.28
USE1-205ENST00000594724 TIFAQ96CG3 184 aa16.77■□□□□ 0.28
USE1-205ENST00000594724 ZNF577Q9BSK1 485 aa16.77■□□□□ 0.28
USE1-205ENST00000594724 AZI2Q9H6S1 392 aa16.77■□□□□ 0.28
USE1-205ENST00000594724 GJB4Q9NTQ9 266 aa16.77■□□□□ 0.28
USE1-205ENST00000594724 EMSYQ7Z589 1322 aa16.76■□□□□ 0.27
USE1-205ENST00000594724 NRCAMQ92823 1304 aa16.76■□□□□ 0.27
USE1-205ENST00000594724 RSPH10B2B2RC85 870 aa16.76■□□□□ 0.27
USE1-205ENST00000594724 M0R2N6 131 aa16.76■□□□□ 0.27
USE1-205ENST00000594724 ATG7O95352 703 aa16.76■□□□□ 0.27
USE1-205ENST00000594724 RSPH10BP0C881 870 aa16.76■□□□□ 0.27
USE1-205ENST00000594724 STAT5BP51692 787 aa16.76■□□□□ 0.27
USE1-205ENST00000594724 PPFIA1Q13136 1202 aa16.76■□□□□ 0.27
USE1-205ENST00000594724 GRIK4Q16099 956 aa16.76■□□□□ 0.27
USE1-205ENST00000594724 TCTN1Q2MV58 587 aa16.76■□□□□ 0.27
USE1-205ENST00000594724 ORC3Q9UBD5 711 aaPredicted RBP16.76■□□□□ 0.27
USE1-205ENST00000594724 TANC1Q9C0D5 1861 aa16.76■□□□□ 0.27
USE1-205ENST00000594724 STK36Q9NRP7 1315 aa16.75■□□□□ 0.27
USE1-205ENST00000594724 PARNO95453 639 aaKnown RBP16.75■□□□□ 0.27
USE1-205ENST00000594724 CXCL10P02778 98 aa16.75■□□□□ 0.27
USE1-205ENST00000594724 CTSHP09668 335 aa16.75■□□□□ 0.27
USE1-205ENST00000594724 INSRRP14616 1297 aa16.75■□□□□ 0.27
USE1-205ENST00000594724 MYOGP15173 224 aa16.75■□□□□ 0.27
USE1-205ENST00000594724 ATP2A2P16615 1042 aaKnown RBP16.75■□□□□ 0.27
USE1-205ENST00000594724 USP11P51784 963 aa16.75■□□□□ 0.27
USE1-205ENST00000594724 IGBP1P78318 339 aa16.75■□□□□ 0.27
USE1-205ENST00000594724 SETQ01105 290 aaPredicted RBP16.75■□□□□ 0.27
USE1-205ENST00000594724 PLCB4Q15147 1175 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms