RNA–Protein interactions for RNA: ENST00000593641.3

SSBP4-203, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-203ENST00000593641 SRBD1Q8N5C6 995 aaKnown RBP26.04■■□□□ 1.76
SSBP4-203ENST00000593641 TOP1MTQ969P6 601 aa26.04■■□□□ 1.76
SSBP4-203ENST00000593641 GPRASP2Q96D09 838 aa26.04■■□□□ 1.76
SSBP4-203ENST00000593641 SAMD11Q96NU1 681 aa26.04■■□□□ 1.76
SSBP4-203ENST00000593641 NRCAMQ92823 1304 aa26.04■■□□□ 1.76
SSBP4-203ENST00000593641 RALGAPA2Q2PPJ7 1873 aa26.03■■□□□ 1.76
SSBP4-203ENST00000593641 UPP2O95045 317 aa26.03■■□□□ 1.76
SSBP4-203ENST00000593641 TCF7P36402 384 aaPredicted RBP26.03■■□□□ 1.76
SSBP4-203ENST00000593641 IFIH1Q9BYX4 1025 aaKnown RBP26.03■■□□□ 1.76
SSBP4-203ENST00000593641 UBE2ZQ9H832 354 aaPredicted RBP26.03■■□□□ 1.76
SSBP4-203ENST00000593641 TELO2Q9Y4R8 837 aa26.03■■□□□ 1.76
SSBP4-203ENST00000593641 RXRAP19793 462 aa26.02■■□□□ 1.76
SSBP4-203ENST00000593641 LIFRP42702 1097 aa26.02■■□□□ 1.76
SSBP4-203ENST00000593641 ADAM17P78536 824 aa26.02■■□□□ 1.76
SSBP4-203ENST00000593641 PTPROQ16827 1216 aa26.02■■□□□ 1.76
SSBP4-203ENST00000593641 CMTR1Q8N1G2 835 aaKnown RBP26.02■■□□□ 1.76
SSBP4-203ENST00000593641 SLC12A7Q9Y666 1083 aa26.02■■□□□ 1.76
SSBP4-203ENST00000593641 COL4A6Q14031 1691 aa26.02■■□□□ 1.76
SSBP4-203ENST00000593641 SPDYE3A6NKU9 549 aa26.01■■□□□ 1.75
SSBP4-203ENST00000593641 KCNA2P16389 499 aa26.01■■□□□ 1.75
SSBP4-203ENST00000593641 MYO7AQ13402 2215 aa26.01■■□□□ 1.75
SSBP4-203ENST00000593641 EPC2Q52LR7 807 aa26.01■■□□□ 1.75
SSBP4-203ENST00000593641 FAM26DQ5JW98 314 aa26.01■■□□□ 1.75
SSBP4-203ENST00000593641 TAF2Q6P1X5 1199 aa26.01■■□□□ 1.75
SSBP4-203ENST00000593641 LSG1Q9H089 658 aaKnown RBP26.01■■□□□ 1.75
SSBP4-203ENST00000593641 LOC101059915A0A1B0GWI6 518 aaPredicted RBP26■■□□□ 1.75
SSBP4-203ENST00000593641 PPFIA1Q13136 1202 aa26■■□□□ 1.75
SSBP4-203ENST00000593641 MTMR1Q13613 665 aa26■■□□□ 1.75
SSBP4-203ENST00000593641 RSPH3Q86UC2 560 aa26■■□□□ 1.75
SSBP4-203ENST00000593641 SEPT1Q8WYJ6 367 aa26■■□□□ 1.75
SSBP4-203ENST00000593641 MRPL38Q96DV4 380 aaKnown RBP26■■□□□ 1.75
SSBP4-203ENST00000593641 OSBPL7Q9BZF2 842 aa26■■□□□ 1.75
SSBP4-203ENST00000593641 ERAP1Q9NZ08 941 aa26■■□□□ 1.75
SSBP4-203ENST00000593641 RAPGEFL1Q9UHV5 662 aa26■■□□□ 1.75
SSBP4-203ENST00000593641 SLC27A2O14975 620 aa25.99■■□□□ 1.75
SSBP4-203ENST00000593641 ATP9AO75110 1047 aa25.99■■□□□ 1.75
SSBP4-203ENST00000593641 TIGD5Q53EQ6 642 aa25.99■■□□□ 1.75
SSBP4-203ENST00000593641 GLG1Q92896 1179 aa25.99■■□□□ 1.75
SSBP4-203ENST00000593641 EHMT1Q9H9B1 1298 aa25.99■■□□□ 1.75
SSBP4-203ENST00000593641 hCG_1642624A0A1W2PR95 340 aa25.98■■□□□ 1.75
SSBP4-203ENST00000593641 ITGB5P18084 799 aa25.98■■□□□ 1.75
SSBP4-203ENST00000593641 KCNA5P22460 613 aa25.98■■□□□ 1.75
SSBP4-203ENST00000593641 MARK3P27448 753 aa25.98■■□□□ 1.75
SSBP4-203ENST00000593641 UBE2SQ16763 222 aa25.98■■□□□ 1.75
SSBP4-203ENST00000593641 CREB3L3Q68CJ9 461 aa25.98■■□□□ 1.75
SSBP4-203ENST00000593641 HEATR3Q7Z4Q2 680 aa25.98■■□□□ 1.75
SSBP4-203ENST00000593641 RPAINQ86UA6 219 aa25.98■■□□□ 1.75
SSBP4-203ENST00000593641 MICU3Q86XE3 530 aa25.98■■□□□ 1.75
SSBP4-203ENST00000593641 RAB11FIP4Q86YS3 637 aa25.98■■□□□ 1.75
SSBP4-203ENST00000593641 CCDC82Q8N4S0 544 aa25.98■■□□□ 1.75
SSBP4-203ENST00000593641 ESYT1Q9BSJ8 1104 aa25.98■■□□□ 1.75
SSBP4-203ENST00000593641 PKD2L1Q9P0L9 805 aa25.98■■□□□ 1.75
SSBP4-203ENST00000593641 TUBE1Q9UJT0 475 aa25.98■■□□□ 1.75
SSBP4-203ENST00000593641 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP25.97■■□□□ 1.75
SSBP4-203ENST00000593641 GHRP10912 638 aa25.97■■□□□ 1.75
SSBP4-203ENST00000593641 GPM6BQ13491 265 aa25.97■■□□□ 1.75
SSBP4-203ENST00000593641 GRIK4Q16099 956 aa25.97■■□□□ 1.75
SSBP4-203ENST00000593641 LEXMQ3ZCV2 418 aa25.97■■□□□ 1.75
SSBP4-203ENST00000593641 TMTC3Q6ZXV5 915 aa25.97■■□□□ 1.75
SSBP4-203ENST00000593641 TMEM192Q8IY95 271 aa25.97■■□□□ 1.75
SSBP4-203ENST00000593641 FANCBQ8NB91 859 aa25.97■■□□□ 1.75
SSBP4-203ENST00000593641 LRRC2Q9BYS8 371 aa25.97■■□□□ 1.75
SSBP4-203ENST00000593641 SMARCAD1Q9H4L7 1026 aa25.97■■□□□ 1.75
SSBP4-203ENST00000593641 ANO2Q9NQ90 1003 aa25.97■■□□□ 1.75
SSBP4-203ENST00000593641 PCDHA6Q9UN73 950 aa25.97■■□□□ 1.75
SSBP4-203ENST00000593641 PCDHA8Q9Y5H6 950 aa25.97■■□□□ 1.75
SSBP4-203ENST00000593641 UBIAD1Q9Y5Z9 338 aa25.97■■□□□ 1.75
SSBP4-203ENST00000593641 GSTTP1A0A1W2PQM5 241 aa25.96■■□□□ 1.75
SSBP4-203ENST00000593641 H3BNC9 293 aa25.96■■□□□ 1.75
SSBP4-203ENST00000593641 MAFGO15525 162 aa25.96■■□□□ 1.75
SSBP4-203ENST00000593641 CHRNA1P02708 482 aa25.96■■□□□ 1.75
SSBP4-203ENST00000593641 SYNE3Q6ZMZ3 975 aa25.96■■□□□ 1.75
SSBP4-203ENST00000593641 RUFY4Q6ZNE9 571 aa25.96■■□□□ 1.75
SSBP4-203ENST00000593641 EPHX3Q9H6B9 360 aa25.96■■□□□ 1.75
SSBP4-203ENST00000593641 JADE2Q9NQC1 790 aa25.96■■□□□ 1.75
SSBP4-203ENST00000593641 TTC3P53804 2025 aa25.95■■□□□ 1.75
SSBP4-203ENST00000593641 IL17RAQ96F46 866 aa25.95■■□□□ 1.74
SSBP4-203ENST00000593641 RPLP2P05387 115 aaKnown RBP25.94■■□□□ 1.74
SSBP4-203ENST00000593641 MGAT3Q09327 533 aa25.94■■□□□ 1.74
SSBP4-203ENST00000593641 COL9A3Q14050 684 aaPredicted RBP25.94■■□□□ 1.74
SSBP4-203ENST00000593641 NECTIN1Q15223 517 aa25.94■■□□□ 1.74
SSBP4-203ENST00000593641 RNF20Q5VTR2 975 aa25.94■■□□□ 1.74
SSBP4-203ENST00000593641 SGMS1Q86VZ5 419 aa25.94■■□□□ 1.74
SSBP4-203ENST00000593641 FIBCD1Q8N539 461 aa25.94■■□□□ 1.74
SSBP4-203ENST00000593641 BANK1Q8NDB2 785 aa25.94■■□□□ 1.74
SSBP4-203ENST00000593641 JPH1Q9HDC5 661 aaPredicted RBP25.94■■□□□ 1.74
SSBP4-203ENST00000593641 LOXHD1Q8IVV2 1947 aa25.94■■□□□ 1.74
SSBP4-203ENST00000593641 MBLAC1A4D2B0 266 aaPredicted RBP25.93■■□□□ 1.74
SSBP4-203ENST00000593641 IGBP1P78318 339 aa25.93■■□□□ 1.74
SSBP4-203ENST00000593641 LPIN1Q14693 890 aa25.93■■□□□ 1.74
SSBP4-203ENST00000593641 DNAJB3Q8WWF6 145 aa25.93■■□□□ 1.74
SSBP4-203ENST00000593641 AZI2Q9H6S1 392 aa25.93■■□□□ 1.74
SSBP4-203ENST00000593641 CTNNB1P35222 781 aa25.92■■□□□ 1.74
SSBP4-203ENST00000593641 TMEM31Q5JXX7 168 aa25.92■■□□□ 1.74
SSBP4-203ENST00000593641 PTCRAQ6ISU1 281 aaPredicted RBP25.92■■□□□ 1.74
SSBP4-203ENST00000593641 GADD45GIP1Q8TAE8 222 aaPredicted RBP25.92■■□□□ 1.74
SSBP4-203ENST00000593641 TNPO1Q92973 898 aaKnown RBP25.92■■□□□ 1.74
SSBP4-203ENST00000593641 NSUN3Q9H649 340 aaKnown RBP25.92■■□□□ 1.74
SSBP4-203ENST00000593641 RBM28Q9NW13 759 aaKnown RBP25.92■■□□□ 1.74
SSBP4-203ENST00000593641 SLC9A2Q9UBY0 812 aa25.92■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms