RNA–Protein interactions for RNA: ENST00000593104.5

PRKCSH-220, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 4

Gene PRKCSH, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-220ENST00000593104 E7EWF7 191 aa12.94□□□□□ -0.34
PRKCSH-220ENST00000593104 LINC01565O15544 149 aa12.94□□□□□ -0.34
PRKCSH-220ENST00000593104 PLEKHA8P1O95397 391 aa12.94□□□□□ -0.34
PRKCSH-220ENST00000593104 ICAM3P32942 547 aa12.94□□□□□ -0.34
PRKCSH-220ENST00000593104 LTBRP36941 435 aa12.94□□□□□ -0.34
PRKCSH-220ENST00000593104 PTPROQ16827 1216 aa12.94□□□□□ -0.34
PRKCSH-220ENST00000593104 TIGD5Q53EQ6 642 aa12.94□□□□□ -0.34
PRKCSH-220ENST00000593104 TTC22Q5TAA0 569 aa12.94□□□□□ -0.34
PRKCSH-220ENST00000593104 RPAINQ86UA6 219 aa12.94□□□□□ -0.34
PRKCSH-220ENST00000593104 NSUN3Q9H649 340 aaKnown RBP12.94□□□□□ -0.34
PRKCSH-220ENST00000593104 MAP3K20Q9NYL2 800 aaKnown RBP12.94□□□□□ -0.34
PRKCSH-220ENST00000593104 BDP1A6H8Y1 2624 aa12.94□□□□□ -0.34
PRKCSH-220ENST00000593104 LOXHD1Q8IVV2 1947 aa12.94□□□□□ -0.34
PRKCSH-220ENST00000593104 MEIS2O14770 477 aa12.93□□□□□ -0.34
PRKCSH-220ENST00000593104 FIBPO43427 364 aa12.93□□□□□ -0.34
PRKCSH-220ENST00000593104 IBSPP21815 317 aaPredicted RBP12.93□□□□□ -0.34
PRKCSH-220ENST00000593104 TCF7P36402 384 aaPredicted RBP12.93□□□□□ -0.34
PRKCSH-220ENST00000593104 NT5C2P49902 561 aa12.93□□□□□ -0.34
PRKCSH-220ENST00000593104 IGBP1P78318 339 aa12.93□□□□□ -0.34
PRKCSH-220ENST00000593104 HYAL1Q12794 435 aa12.93□□□□□ -0.34
PRKCSH-220ENST00000593104 TRDNQ13061 729 aa12.93□□□□□ -0.34
PRKCSH-220ENST00000593104 NEDD9Q14511 834 aa12.93□□□□□ -0.34
PRKCSH-220ENST00000593104 LPIN1Q14693 890 aa12.93□□□□□ -0.34
PRKCSH-220ENST00000593104 UBE2SQ16763 222 aa12.93□□□□□ -0.34
PRKCSH-220ENST00000593104 SMARCC2Q8TAQ2 1214 aa12.93□□□□□ -0.34
PRKCSH-220ENST00000593104 DNAJB3Q8WWF6 145 aa12.93□□□□□ -0.34
PRKCSH-220ENST00000593104 LINC01599Q8WXQ3 324 aa12.93□□□□□ -0.34
PRKCSH-220ENST00000593104 PABPC5Q96DU9 382 aaKnown RBP12.93□□□□□ -0.34
PRKCSH-220ENST00000593104 USP26Q9BXU7 913 aa12.93□□□□□ -0.34
PRKCSH-220ENST00000593104 IGFLR1Q9H665 355 aa12.93□□□□□ -0.34
PRKCSH-220ENST00000593104 PCDHGC5Q9Y5F6 944 aa12.93□□□□□ -0.34
PRKCSH-220ENST00000593104 GSTTP1A0A1W2PQM5 241 aa12.92□□□□□ -0.34
PRKCSH-220ENST00000593104 POTEB3A0JP26 581 aa12.92□□□□□ -0.34
PRKCSH-220ENST00000593104 PRR33A8MZF0 331 aa12.92□□□□□ -0.34
PRKCSH-220ENST00000593104 TBX10O75333 385 aa12.92□□□□□ -0.34
PRKCSH-220ENST00000593104 ITGB5P18084 799 aa12.92□□□□□ -0.34
PRKCSH-220ENST00000593104 CHMLP26374 656 aa12.92□□□□□ -0.34
PRKCSH-220ENST00000593104 GATMP50440 423 aa12.92□□□□□ -0.34
PRKCSH-220ENST00000593104 ZP2Q05996 745 aa12.92□□□□□ -0.34
PRKCSH-220ENST00000593104 MGAT3Q09327 533 aa12.92□□□□□ -0.34
PRKCSH-220ENST00000593104 TMEM62Q0P6H9 643 aa12.92□□□□□ -0.34
PRKCSH-220ENST00000593104 GNPTABQ3T906 1256 aa12.92□□□□□ -0.34
PRKCSH-220ENST00000593104 FAM26DQ5JW98 314 aa12.92□□□□□ -0.34
PRKCSH-220ENST00000593104 POTEBQ6S5H4 581 aa12.92□□□□□ -0.34
PRKCSH-220ENST00000593104 RALYLQ86SE5 291 aaKnown RBP12.92□□□□□ -0.34
PRKCSH-220ENST00000593104 MB21D2Q8IYB1 491 aaPredicted RBP12.92□□□□□ -0.34
PRKCSH-220ENST00000593104 FIBCD1Q8N539 461 aa12.92□□□□□ -0.34
PRKCSH-220ENST00000593104 IGDCC4Q8TDY8 1250 aa12.92□□□□□ -0.34
PRKCSH-220ENST00000593104 IL17RAQ96F46 866 aa12.92□□□□□ -0.34
PRKCSH-220ENST00000593104 FAM49AQ9H0Q0 323 aaPredicted RBP12.92□□□□□ -0.34
PRKCSH-220ENST00000593104 AGO3Q9H9G7 860 aaKnown RBP12.92□□□□□ -0.34
PRKCSH-220ENST00000593104 ALG13Q9NP73 1137 aaKnown RBP12.92□□□□□ -0.34
PRKCSH-220ENST00000593104 ZNF215Q9UL58 517 aaPredicted RBP12.92□□□□□ -0.34
PRKCSH-220ENST00000593104 CDY2AQ9Y6F7 541 aa12.92□□□□□ -0.34
PRKCSH-220ENST00000593104 ADGRA3Q8IWK6 1321 aa12.91□□□□□ -0.34
PRKCSH-220ENST00000593104 ERICH2A1L162 156 aa12.91□□□□□ -0.34
PRKCSH-220ENST00000593104 ENPP3O14638 875 aa12.91□□□□□ -0.34
PRKCSH-220ENST00000593104 KCNA2P16389 499 aa12.91□□□□□ -0.34
PRKCSH-220ENST00000593104 DNAJB1P25685 340 aa12.91□□□□□ -0.34
PRKCSH-220ENST00000593104 CD52P31358 61 aa12.91□□□□□ -0.34
PRKCSH-220ENST00000593104 IRS1P35568 1242 aa12.91□□□□□ -0.34
PRKCSH-220ENST00000593104 PPFIA1Q13136 1202 aa12.91□□□□□ -0.34
PRKCSH-220ENST00000593104 CAMK1Q14012 370 aa12.91□□□□□ -0.34
PRKCSH-220ENST00000593104 GRIK4Q16099 956 aa12.91□□□□□ -0.34
PRKCSH-220ENST00000593104 PAN2Q504Q3 1202 aaKnown RBP12.91□□□□□ -0.34
PRKCSH-220ENST00000593104 MARCH8Q5T0T0 291 aa12.91□□□□□ -0.34
PRKCSH-220ENST00000593104 PCNX4Q63HM2 1172 aa12.91□□□□□ -0.34
PRKCSH-220ENST00000593104 CATIPQ7Z7H3 387 aa12.91□□□□□ -0.34
PRKCSH-220ENST00000593104 ADGRD2Q7Z7M1 963 aa12.91□□□□□ -0.34
PRKCSH-220ENST00000593104 ZNF654Q8IZM8 581 aa12.91□□□□□ -0.34
PRKCSH-220ENST00000593104 CCDC82Q8N4S0 544 aa12.91□□□□□ -0.34
PRKCSH-220ENST00000593104 SRBD1Q8N5C6 995 aaKnown RBP12.91□□□□□ -0.34
PRKCSH-220ENST00000593104 SAMD3Q8N6K7 520 aa12.91□□□□□ -0.34
PRKCSH-220ENST00000593104 NCOA7Q8NI08 942 aa12.91□□□□□ -0.34
PRKCSH-220ENST00000593104 TRAPPC12Q8WVT3 735 aa12.91□□□□□ -0.34
PRKCSH-220ENST00000593104 SAMD11Q96NU1 681 aa12.91□□□□□ -0.34
PRKCSH-220ENST00000593104 EHMT1Q9H9B1 1298 aa12.91□□□□□ -0.34
PRKCSH-220ENST00000593104 RC3H2Q9HBD1 1191 aaKnown RBP12.91□□□□□ -0.34
PRKCSH-220ENST00000593104 LY9Q9HBG7 655 aa12.91□□□□□ -0.34
PRKCSH-220ENST00000593104 MUTYHQ9UIF7 546 aa12.91□□□□□ -0.34
PRKCSH-220ENST00000593104 U3KPZ7 1027 aaPredicted RBP12.91□□□□□ -0.34
PRKCSH-220ENST00000593104 TTC3P53804 2025 aa12.9□□□□□ -0.34
PRKCSH-220ENST00000593104 DCXO43602 365 aa12.9□□□□□ -0.34
PRKCSH-220ENST00000593104 CAND2O75155 1236 aa12.9□□□□□ -0.34
PRKCSH-220ENST00000593104 GNAT1P11488 350 aa12.9□□□□□ -0.34
PRKCSH-220ENST00000593104 BMPR1AP36894 532 aa12.9□□□□□ -0.34
PRKCSH-220ENST00000593104 COL19A1Q14993 1142 aa12.9□□□□□ -0.34
PRKCSH-220ENST00000593104 FBXO47Q5MNV8 452 aa12.9□□□□□ -0.34
PRKCSH-220ENST00000593104 RTN4RL1Q86UN2 441 aaPredicted RBP12.9□□□□□ -0.34
PRKCSH-220ENST00000593104 APBB2Q92870 758 aa12.9□□□□□ -0.34
PRKCSH-220ENST00000593104 PGBD1Q96JS3 809 aa12.9□□□□□ -0.34
PRKCSH-220ENST00000593104 PCYT2Q99447 389 aa12.9□□□□□ -0.34
PRKCSH-220ENST00000593104 LRRC2Q9BYS8 371 aa12.9□□□□□ -0.34
PRKCSH-220ENST00000593104 MRPL42Q9Y6G3 142 aaKnown RBP12.9□□□□□ -0.34
PRKCSH-220ENST00000593104 NRCAMQ92823 1304 aa12.89□□□□□ -0.35
PRKCSH-220ENST00000593104 C5orf67F2Z3F1 127 aa12.89□□□□□ -0.35
PRKCSH-220ENST00000593104 MBTPS2O43462 519 aa12.89□□□□□ -0.35
PRKCSH-220ENST00000593104 IRX6P78412 446 aaPredicted RBP12.89□□□□□ -0.35
PRKCSH-220ENST00000593104 BTG3Q14201 252 aaPredicted RBP12.89□□□□□ -0.35
PRKCSH-220ENST00000593104 CSPP1Q1MSJ5 1256 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms