RNA–Protein interactions for RNA: ENST00000592540.5

SPC24-206, Transcript of SPC24, NDC80 kinetochore complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPC24, Length 2,315 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC24-206ENST00000592540 ACTRT1Q8TDG2 376 aa19.71■□□□□ 0.75
SPC24-206ENST00000592540 SNX29Q8TEQ0 813 aa19.71■□□□□ 0.75
SPC24-206ENST00000592540 JAG2Q9Y219 1238 aa19.71■□□□□ 0.75
SPC24-206ENST00000592540 DOT1LQ8TEK3 1739 aa19.71■□□□□ 0.75
SPC24-206ENST00000592540 SLC37A4O43826 429 aa19.7■□□□□ 0.74
SPC24-206ENST00000592540 CEP104O60308 925 aa19.7■□□□□ 0.74
SPC24-206ENST00000592540 PPP2R2AP63151 447 aa19.7■□□□□ 0.74
SPC24-206ENST00000592540 DZIP1Q86YF9 867 aaKnown RBP19.7■□□□□ 0.74
SPC24-206ENST00000592540 TRIM59Q8IWR1 403 aa19.7■□□□□ 0.74
SPC24-206ENST00000592540 CEP63Q96MT8 703 aa19.7■□□□□ 0.74
SPC24-206ENST00000592540 KANSL2Q9H9L4 492 aa19.7■□□□□ 0.74
SPC24-206ENST00000592540 BTG4Q9NY30 223 aa19.7■□□□□ 0.74
SPC24-206ENST00000592540 BCCIPQ9P287 314 aaKnown RBP eCLIP19.7■□□□□ 0.74
SPC24-206ENST00000592540 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.7■□□□□ 0.74
SPC24-206ENST00000592540 DNM1LO00429 736 aa19.7■□□□□ 0.74
SPC24-206ENST00000592540 NEDD9Q14511 834 aa19.7■□□□□ 0.74
SPC24-206ENST00000592540 PDIA5Q14554 519 aa19.7■□□□□ 0.74
SPC24-206ENST00000592540 SPRED3Q2MJR0 410 aa19.7■□□□□ 0.74
SPC24-206ENST00000592540 TMEM119Q4V9L6 283 aa19.7■□□□□ 0.74
SPC24-206ENST00000592540 ODF2Q5BJF6 829 aa19.7■□□□□ 0.74
SPC24-206ENST00000592540 AGBL2Q5U5Z8 902 aa19.7■□□□□ 0.74
SPC24-206ENST00000592540 KRT79Q5XKE5 535 aa19.7■□□□□ 0.74
SPC24-206ENST00000592540 DNAJC19Q96DA6 116 aa19.7■□□□□ 0.74
SPC24-206ENST00000592540 SEC16BQ96JE7 1060 aa19.7■□□□□ 0.74
SPC24-206ENST00000592540 RAB34Q9BZG1 259 aa19.7■□□□□ 0.74
SPC24-206ENST00000592540 CNOT8Q9UFF9 292 aaKnown RBP19.7■□□□□ 0.74
SPC24-206ENST00000592540 SEC63Q9UGP8 760 aaKnown RBP19.7■□□□□ 0.74
SPC24-206ENST00000592540 MCM8Q9UJA3 840 aa19.7■□□□□ 0.74
SPC24-206ENST00000592540 FBXL5Q9UKA1 691 aa19.7■□□□□ 0.74
SPC24-206ENST00000592540 NAV1Q8NEY1 1877 aa19.69■□□□□ 0.74
SPC24-206ENST00000592540 C5orf60A6NFR6 353 aa19.69■□□□□ 0.74
SPC24-206ENST00000592540 SART1O43290 800 aaKnown RBP19.69■□□□□ 0.74
SPC24-206ENST00000592540 ANKRD20A8PQ5CZ79 823 aa19.69■□□□□ 0.74
SPC24-206ENST00000592540 PROCA1Q8NCQ7 364 aaPredicted RBP19.69■□□□□ 0.74
SPC24-206ENST00000592540 UBLCP1Q8WVY7 318 aaPredicted RBP19.69■□□□□ 0.74
SPC24-206ENST00000592540 CALR3Q96L12 384 aaKnown RBP19.69■□□□□ 0.74
SPC24-206ENST00000592540 AP1M1Q9BXS5 423 aa19.69■□□□□ 0.74
SPC24-206ENST00000592540 GANQ9H2C0 597 aa19.69■□□□□ 0.74
SPC24-206ENST00000592540 GOLPH3Q9H4A6 298 aa19.69■□□□□ 0.74
SPC24-206ENST00000592540 VAT1LQ9HCJ6 419 aa19.69■□□□□ 0.74
SPC24-206ENST00000592540 LEMD3Q9Y2U8 911 aa19.69■□□□□ 0.74
SPC24-206ENST00000592540 KIF13BQ9NQT8 1826 aa19.69■□□□□ 0.74
SPC24-206ENST00000592540 TDP2O95551 362 aa19.69■□□□□ 0.74
SPC24-206ENST00000592540 GNA14O95837 355 aa19.69■□□□□ 0.74
SPC24-206ENST00000592540 PAEPP09466 180 aa19.69■□□□□ 0.74
SPC24-206ENST00000592540 RASA1P20936 1047 aa19.69■□□□□ 0.74
SPC24-206ENST00000592540 MTMR3Q13615 1198 aa19.69■□□□□ 0.74
SPC24-206ENST00000592540 USP17L2Q6R6M4 530 aa19.69■□□□□ 0.74
SPC24-206ENST00000592540 GIMAP7Q8NHV1 300 aa19.69■□□□□ 0.74
SPC24-206ENST00000592540 SH3RF3Q8TEJ3 882 aaPredicted RBP19.69■□□□□ 0.74
SPC24-206ENST00000592540 RAPGEF5Q92565 580 aa19.69■□□□□ 0.74
SPC24-206ENST00000592540 PIGSQ96S52 555 aa19.69■□□□□ 0.74
SPC24-206ENST00000592540 C21orf2O43822 256 aa19.68■□□□□ 0.74
SPC24-206ENST00000592540 FLT3P36888 993 aa19.68■□□□□ 0.74
SPC24-206ENST00000592540 MARSP56192 900 aaKnown RBP19.68■□□□□ 0.74
SPC24-206ENST00000592540 FAM26FQ5R3K3 315 aa19.68■□□□□ 0.74
SPC24-206ENST00000592540 C10orf76Q5T2E6 689 aa19.68■□□□□ 0.74
SPC24-206ENST00000592540 WLSQ5T9L3 541 aa19.68■□□□□ 0.74
SPC24-206ENST00000592540 CYB5D1Q6P9G0 228 aa19.68■□□□□ 0.74
SPC24-206ENST00000592540 PARP9Q8IXQ6 854 aa19.68■□□□□ 0.74
SPC24-206ENST00000592540 FUKQ8N0W3 1084 aa19.68■□□□□ 0.74
SPC24-206ENST00000592540 LRRC57Q8N9N7 239 aa19.68■□□□□ 0.74
SPC24-206ENST00000592540 DDX47Q9H0S4 455 aaKnown RBP19.68■□□□□ 0.74
SPC24-206ENST00000592540 NOVA2Q9UNW9 492 aaKnown RBP19.68■□□□□ 0.74
SPC24-206ENST00000592540 ESYT2A0FGR8 921 aa19.68■□□□□ 0.74
SPC24-206ENST00000592540 PGRMC1O00264 195 aaKnown RBP19.68■□□□□ 0.74
SPC24-206ENST00000592540 EDIL3O43854 480 aa19.68■□□□□ 0.74
SPC24-206ENST00000592540 ZBTB48P10074 688 aaPredicted RBP19.68■□□□□ 0.74
SPC24-206ENST00000592540 PTK2Q05397 1052 aa19.68■□□□□ 0.74
SPC24-206ENST00000592540 BYSLQ13895 437 aaKnown RBP19.68■□□□□ 0.74
SPC24-206ENST00000592540 SNCBQ16143 134 aa19.68■□□□□ 0.74
SPC24-206ENST00000592540 ECM1Q16610 540 aa19.68■□□□□ 0.74
SPC24-206ENST00000592540 CACNA2D3Q8IZS8 1091 aa19.68■□□□□ 0.74
SPC24-206ENST00000592540 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.68■□□□□ 0.741e-8■■■■□ 22.3
SPC24-206ENST00000592540 FGFBP2Q9BYJ0 223 aa19.68■□□□□ 0.74
SPC24-206ENST00000592540 PANK4Q9NVE7 773 aa19.68■□□□□ 0.74
SPC24-206ENST00000592540 MMP14P50281 582 aa19.67■□□□□ 0.74
SPC24-206ENST00000592540 SEPT2Q15019 361 aa19.67■□□□□ 0.74
SPC24-206ENST00000592540 IFI16Q16666 785 aaKnown RBP19.67■□□□□ 0.74
SPC24-206ENST00000592540 DONSONQ9NYP3 566 aa19.67■□□□□ 0.74
SPC24-206ENST00000592540 TBC1D7Q9P0N9 293 aa19.67■□□□□ 0.74
SPC24-206ENST00000592540 ZNF652Q9Y2D9 606 aa19.67■□□□□ 0.74
SPC24-206ENST00000592540 NOC2LQ9Y3T9 749 aaKnown RBP19.67■□□□□ 0.74
SPC24-206ENST00000592540 BACH1O14867 736 aa19.67■□□□□ 0.74
SPC24-206ENST00000592540 PTPROQ16827 1216 aa19.67■□□□□ 0.74
SPC24-206ENST00000592540 SPTY2D1Q68D10 685 aaPredicted RBP19.67■□□□□ 0.74
SPC24-206ENST00000592540 METTL13Q8N6R0 699 aa19.67■□□□□ 0.74
SPC24-206ENST00000592540 TATDN2Q93075 761 aa19.67■□□□□ 0.74
SPC24-206ENST00000592540 HAUS2Q9NVX0 235 aa19.67■□□□□ 0.74
SPC24-206ENST00000592540 DCDC2CA8MYV0 355 aa19.66■□□□□ 0.74
SPC24-206ENST00000592540 CCDC188H7C350 402 aa19.66■□□□□ 0.74
SPC24-206ENST00000592540 DAPK3O43293 454 aa19.66■□□□□ 0.74
SPC24-206ENST00000592540 SCTRP47872 440 aa19.66■□□□□ 0.74
SPC24-206ENST00000592540 ITPK1Q13572 414 aa19.66■□□□□ 0.74
SPC24-206ENST00000592540 LACTB2Q53H82 288 aaPredicted RBP19.66■□□□□ 0.74
SPC24-206ENST00000592540 ARMC9Q7Z3E5 817 aa19.66■□□□□ 0.74
SPC24-206ENST00000592540 ZNF571Q7Z3V5 609 aaPredicted RBP19.66■□□□□ 0.74
SPC24-206ENST00000592540 IRF2BP2Q7Z5L9 587 aa19.66■□□□□ 0.74
SPC24-206ENST00000592540 NELFCDQ8IXH7 590 aa19.66■□□□□ 0.74
SPC24-206ENST00000592540 SGSM3Q96HU1 749 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms