RNA–Protein interactions for RNA: ENST00000592106.5

VMP1-214, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-214ENST00000592106 GPRASP2Q96D09 838 aa11.65□□□□□ -0.54
VMP1-214ENST00000592106 TGS1Q96RS0 853 aaKnown RBP11.65□□□□□ -0.54
VMP1-214ENST00000592106 GPR20Q99678 358 aa11.65□□□□□ -0.54
VMP1-214ENST00000592106 LSG1Q9H089 658 aaKnown RBP11.65□□□□□ -0.54
VMP1-214ENST00000592106 RTEL1Q9NZ71 1219 aa11.65□□□□□ -0.54
VMP1-214ENST00000592106 LMCD1Q9NZU5 365 aa11.65□□□□□ -0.54
VMP1-214ENST00000592106 MYO9BQ13459 2157 aa11.64□□□□□ -0.55
VMP1-214ENST00000592106 RFXAPO00287 272 aa11.64□□□□□ -0.55
VMP1-214ENST00000592106 PLEKHA8P1O95397 391 aa11.64□□□□□ -0.55
VMP1-214ENST00000592106 HOXC8P31273 242 aa11.64□□□□□ -0.55
VMP1-214ENST00000592106 SP4Q02446 784 aa11.64□□□□□ -0.55
VMP1-214ENST00000592106 GRB10Q13322 594 aa11.64□□□□□ -0.55
VMP1-214ENST00000592106 GPNMBQ14956 572 aa11.64□□□□□ -0.55
VMP1-214ENST00000592106 UTP14CQ5TAP6 766 aaKnown RBP11.64□□□□□ -0.55
VMP1-214ENST00000592106 USP17L6PQ6QN14 398 aa11.64□□□□□ -0.55
VMP1-214ENST00000592106 RSPH3Q86UC2 560 aa11.64□□□□□ -0.55
VMP1-214ENST00000592106 TEX2Q8IWB9 1127 aa11.64□□□□□ -0.55
VMP1-214ENST00000592106 MYOCDQ8IZQ8 938 aa11.64□□□□□ -0.55
VMP1-214ENST00000592106 TET1Q8NFU7 2136 aa11.64□□□□□ -0.55
VMP1-214ENST00000592106 APBB2Q92870 758 aa11.64□□□□□ -0.55
VMP1-214ENST00000592106 WNT8BQ93098 351 aa11.64□□□□□ -0.55
VMP1-214ENST00000592106 SAMD11Q96NU1 681 aa11.64□□□□□ -0.55
VMP1-214ENST00000592106 PSTPIP2Q9H939 334 aa11.64□□□□□ -0.55
VMP1-214ENST00000592106 RBM28Q9NW13 759 aaKnown RBP11.64□□□□□ -0.55
VMP1-214ENST00000592106 INSL6Q9Y581 213 aa11.64□□□□□ -0.55
VMP1-214ENST00000592106 COL4A4P53420 1690 aaPredicted RBP11.64□□□□□ -0.55
VMP1-214ENST00000592106 NRCAMQ92823 1304 aa11.63□□□□□ -0.55
VMP1-214ENST00000592106 PTPRSQ13332 1948 aa11.63□□□□□ -0.55
VMP1-214ENST00000592106 BAZ2BQ9UIF8 2168 aaKnown RBP11.63□□□□□ -0.55
VMP1-214ENST00000592106 EPOPA6NHQ4 379 aa11.63□□□□□ -0.55
VMP1-214ENST00000592106 MEIS2O14770 477 aa11.63□□□□□ -0.55
VMP1-214ENST00000592106 TREHO43280 583 aa11.63□□□□□ -0.55
VMP1-214ENST00000592106 RPLP2P05387 115 aaKnown RBP11.63□□□□□ -0.55
VMP1-214ENST00000592106 CTSHP09668 335 aa11.63□□□□□ -0.55
VMP1-214ENST00000592106 ARHGAP4P98171 946 aa11.63□□□□□ -0.55
VMP1-214ENST00000592106 SEMA3FQ13275 785 aa11.63□□□□□ -0.55
VMP1-214ENST00000592106 PLEKHG4Q58EX7 1191 aa11.63□□□□□ -0.55
VMP1-214ENST00000592106 TAF2Q6P1X5 1199 aa11.63□□□□□ -0.55
VMP1-214ENST00000592106 TRAF7Q6Q0C0 670 aa11.63□□□□□ -0.55
VMP1-214ENST00000592106 TMTC3Q6ZXV5 915 aa11.63□□□□□ -0.55
VMP1-214ENST00000592106 MICU3Q86XE3 530 aa11.63□□□□□ -0.55
VMP1-214ENST00000592106 SRBD1Q8N5C6 995 aaKnown RBP11.63□□□□□ -0.55
VMP1-214ENST00000592106 DBF4BQ8NFT6 615 aa11.63□□□□□ -0.55
VMP1-214ENST00000592106 GDPD5Q8WTR4 605 aa11.63□□□□□ -0.55
VMP1-214ENST00000592106 TNPO1Q92973 898 aaKnown RBP11.63□□□□□ -0.55
VMP1-214ENST00000592106 RNPEPQ9H4A4 650 aa11.63□□□□□ -0.55
VMP1-214ENST00000592106 LCHNA4D1U4 455 aa11.62□□□□□ -0.55
VMP1-214ENST00000592106 LINC01553A4QN01 128 aa11.62□□□□□ -0.55
VMP1-214ENST00000592106 hCG_1984214I3L0E3 225 aa11.62□□□□□ -0.55
VMP1-214ENST00000592106 MAFGO15525 162 aa11.62□□□□□ -0.55
VMP1-214ENST00000592106 PPP1R37O75864 691 aa11.62□□□□□ -0.55
VMP1-214ENST00000592106 ARHGEF15O94989 841 aa11.62□□□□□ -0.55
VMP1-214ENST00000592106 RXRAP19793 462 aa11.62□□□□□ -0.55
VMP1-214ENST00000592106 TCF7P36402 384 aaPredicted RBP11.62□□□□□ -0.55
VMP1-214ENST00000592106 ERVK-21P61565 698 aa11.62□□□□□ -0.55
VMP1-214ENST00000592106 MTMR1Q13613 665 aa11.62□□□□□ -0.55
VMP1-214ENST00000592106 KRT32Q14532 448 aa11.62□□□□□ -0.55
VMP1-214ENST00000592106 MBTPS1Q14703 1052 aa11.62□□□□□ -0.55
VMP1-214ENST00000592106 PTPROQ16827 1216 aa11.62□□□□□ -0.55
VMP1-214ENST00000592106 BMP2KLQ5H9B9 411 aa11.62□□□□□ -0.55
VMP1-214ENST00000592106 PPP1R18Q6NYC8 613 aa11.62□□□□□ -0.55
VMP1-214ENST00000592106 FAM117BQ6P1L5 589 aa11.62□□□□□ -0.55
VMP1-214ENST00000592106 CENPQQ7L2Z9 268 aaPredicted RBP11.62□□□□□ -0.55
VMP1-214ENST00000592106 HEATR3Q7Z4Q2 680 aa11.62□□□□□ -0.55
VMP1-214ENST00000592106 SGMS1Q86VZ5 419 aa11.62□□□□□ -0.55
VMP1-214ENST00000592106 TRIM50Q86XT4 487 aa11.62□□□□□ -0.55
VMP1-214ENST00000592106 ZNF713Q8N859 430 aaPredicted RBP11.62□□□□□ -0.55
VMP1-214ENST00000592106 FANCBQ8NB91 859 aa11.62□□□□□ -0.55
VMP1-214ENST00000592106 SEPT1Q8WYJ6 367 aa11.62□□□□□ -0.55
VMP1-214ENST00000592106 HLA-CQ95604 372 aa11.62□□□□□ -0.55
VMP1-214ENST00000592106 YME1L1Q96TA2 773 aa11.62□□□□□ -0.55
VMP1-214ENST00000592106 SETD4Q9NVD3 440 aa11.62□□□□□ -0.55
VMP1-214ENST00000592106 ERAP1Q9NZ08 941 aa11.62□□□□□ -0.55
VMP1-214ENST00000592106 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.62□□□□□ -0.55
VMP1-214ENST00000592106 MICAL3Q7RTP6 2002 aa11.62□□□□□ -0.55
VMP1-214ENST00000592106 LAMA2P24043 3122 aaKnown RBP11.61□□□□□ -0.55
VMP1-214ENST00000592106 SIP14410 1827 aa11.61□□□□□ -0.55
VMP1-214ENST00000592106 NAPAP54920 295 aa11.61□□□□□ -0.55
VMP1-214ENST00000592106 PPFIA1Q13136 1202 aa11.61□□□□□ -0.55
VMP1-214ENST00000592106 HIC1Q14526 733 aa11.61□□□□□ -0.55
VMP1-214ENST00000592106 NECTIN1Q15223 517 aa11.61□□□□□ -0.55
VMP1-214ENST00000592106 TMCO2Q7Z6W1 182 aaPredicted RBP11.61□□□□□ -0.55
VMP1-214ENST00000592106 CMTR1Q8N1G2 835 aaKnown RBP11.61□□□□□ -0.55
VMP1-214ENST00000592106 LMBR1Q8WVP7 490 aa11.61□□□□□ -0.55
VMP1-214ENST00000592106 GLG1Q92896 1179 aa11.61□□□□□ -0.55
VMP1-214ENST00000592106 NEK1Q96PY6 1258 aa11.61□□□□□ -0.55
VMP1-214ENST00000592106 LRRC2Q9BYS8 371 aa11.61□□□□□ -0.55
VMP1-214ENST00000592106 IFIH1Q9BYX4 1025 aaKnown RBP11.61□□□□□ -0.55
VMP1-214ENST00000592106 GLT8D2Q9H1C3 349 aa11.61□□□□□ -0.55
VMP1-214ENST00000592106 SMARCAD1Q9H4L7 1026 aa11.61□□□□□ -0.55
VMP1-214ENST00000592106 MTUS1Q9ULD2 1270 aa11.61□□□□□ -0.55
VMP1-214ENST00000592106 PCDHA6Q9UN73 950 aa11.61□□□□□ -0.55
VMP1-214ENST00000592106 PCDHA8Q9Y5H6 950 aa11.61□□□□□ -0.55
VMP1-214ENST00000592106 DOCK5Q9H7D0 1870 aa11.6□□□□□ -0.55
VMP1-214ENST00000592106 COL4A6Q14031 1691 aa11.6□□□□□ -0.55
VMP1-214ENST00000592106 ZBTB43O43298 467 aa11.6□□□□□ -0.55
VMP1-214ENST00000592106 FOSP01100 380 aaPredicted RBP11.6□□□□□ -0.55
VMP1-214ENST00000592106 HMGB1P09429 215 aaKnown RBP11.6□□□□□ -0.55
VMP1-214ENST00000592106 KCNA2P16389 499 aa11.6□□□□□ -0.55
VMP1-214ENST00000592106 HTRA4P83105 476 aaPredicted RBP11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms