RNA–Protein interactions for RNA: ENST00000591764.1

DNMT1-224, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 341 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-224ENST00000591764 PRR12Q9ULL5 1215 aa9.67□□□□□ -0.86
DNMT1-224ENST00000591764 CHD9Q3L8U1 2897 aa9.67□□□□□ -0.86
DNMT1-224ENST00000591764 GRIN2DO15399 1336 aa9.66□□□□□ -0.86
DNMT1-224ENST00000591764 TTC41PQ6P2S7 1318 aa9.66□□□□□ -0.86
DNMT1-224ENST00000591764 M0R2C6 588 aa9.66□□□□□ -0.86
DNMT1-224ENST00000591764 SMARCA5O60264 1052 aaPredicted RBP9.66□□□□□ -0.86
DNMT1-224ENST00000591764 PARNO95453 639 aaKnown RBP9.66□□□□□ -0.86
DNMT1-224ENST00000591764 MYOGP15173 224 aa9.66□□□□□ -0.86
DNMT1-224ENST00000591764 POU3F3P20264 500 aaPredicted RBP9.66□□□□□ -0.86
DNMT1-224ENST00000591764 GSK3AP49840 483 aa9.66□□□□□ -0.86
DNMT1-224ENST00000591764 ALDH5A1P51649 535 aaPredicted RBP9.66□□□□□ -0.86
DNMT1-224ENST00000591764 PTPN11Q06124 597 aaPredicted RBP9.66□□□□□ -0.86
DNMT1-224ENST00000591764 TTLL4Q14679 1199 aa9.66□□□□□ -0.86
DNMT1-224ENST00000591764 TAPT1Q6NXT6 567 aa9.66□□□□□ -0.86
DNMT1-224ENST00000591764 KCTD1Q719H9 257 aa9.66□□□□□ -0.86
DNMT1-224ENST00000591764 MORC4Q8TE76 937 aa9.66□□□□□ -0.86
DNMT1-224ENST00000591764 SCFD2Q8WU76 684 aa9.66□□□□□ -0.86
DNMT1-224ENST00000591764 PDGFCQ9NRA1 345 aa9.66□□□□□ -0.86
DNMT1-224ENST00000591764 TRMT13Q9NUP7 481 aaKnown RBP9.66□□□□□ -0.86
DNMT1-224ENST00000591764 PCDHB9Q9Y5E1 797 aa9.66□□□□□ -0.86
DNMT1-224ENST00000591764 SCN10AQ9Y5Y9 1956 aa9.66□□□□□ -0.86
DNMT1-224ENST00000591764 TANC1Q9C0D5 1861 aa9.66□□□□□ -0.86
DNMT1-224ENST00000591764 RANBP6O60518 1105 aaKnown RBP9.65□□□□□ -0.86
DNMT1-224ENST00000591764 CYP2C9P11712 490 aa9.65□□□□□ -0.86
DNMT1-224ENST00000591764 TFF2Q03403 129 aa9.65□□□□□ -0.86
DNMT1-224ENST00000591764 MUM1L1Q5H9M0 696 aa9.65□□□□□ -0.86
DNMT1-224ENST00000591764 TMEM31Q5JXX7 168 aa9.65□□□□□ -0.86
DNMT1-224ENST00000591764 DNERQ8NFT8 737 aa9.65□□□□□ -0.86
DNMT1-224ENST00000591764 CAGE1Q8TC20 777 aa9.65□□□□□ -0.86
DNMT1-224ENST00000591764 ARNTL2Q8WYA1 636 aa9.65□□□□□ -0.86
DNMT1-224ENST00000591764 CHMP4CQ96CF2 233 aa9.65□□□□□ -0.86
DNMT1-224ENST00000591764 NECAB3Q96P71 396 aaPredicted RBP9.65□□□□□ -0.86
DNMT1-224ENST00000591764 RANBP17Q9H2T7 1088 aaKnown RBP9.65□□□□□ -0.86
DNMT1-224ENST00000591764 CUEDC1Q9NWM3 386 aaPredicted RBP9.65□□□□□ -0.86
DNMT1-224ENST00000591764 MTMR7Q9Y216 660 aa9.65□□□□□ -0.86
DNMT1-224ENST00000591764 MTCH2Q9Y6C9 303 aa9.65□□□□□ -0.86
DNMT1-224ENST00000591764 EFCAB14O75071 495 aa9.64□□□□□ -0.87
DNMT1-224ENST00000591764 CALML3P27482 149 aa9.64□□□□□ -0.87
DNMT1-224ENST00000591764 KCNQ1P51787 676 aa9.64□□□□□ -0.87
DNMT1-224ENST00000591764 BAATQ14032 418 aaPredicted RBP9.64□□□□□ -0.87
DNMT1-224ENST00000591764 SYDE2Q5VT97 1194 aa9.64□□□□□ -0.87
DNMT1-224ENST00000591764 RNF207Q6ZRF8 634 aa9.64□□□□□ -0.87
DNMT1-224ENST00000591764 SV2AQ7L0J3 742 aa9.64□□□□□ -0.87
DNMT1-224ENST00000591764 HERC6Q8IVU3 1022 aa9.64□□□□□ -0.87
DNMT1-224ENST00000591764 AFAP1L1Q8TED9 768 aa9.64□□□□□ -0.87
DNMT1-224ENST00000591764 WHAMMQ8TF30 809 aa9.64□□□□□ -0.87
DNMT1-224ENST00000591764 TOMM22Q9NS69 142 aa9.64□□□□□ -0.87
DNMT1-224ENST00000591764 RAPGEFL1Q9UHV5 662 aa9.64□□□□□ -0.87
DNMT1-224ENST00000591764 RCAN3Q9UKA8 241 aa9.64□□□□□ -0.87
DNMT1-224ENST00000591764 SCN5AQ14524 2016 aa9.63□□□□□ -0.87
DNMT1-224ENST00000591764 LCTP09848 1927 aa9.63□□□□□ -0.87
DNMT1-224ENST00000591764 RBM47A0AV96 593 aaKnown RBP9.63□□□□□ -0.87
DNMT1-224ENST00000591764 IQCF3P0C7M6 154 aa9.63□□□□□ -0.87
DNMT1-224ENST00000591764 TOP1P11387 765 aaKnown RBP9.63□□□□□ -0.87
DNMT1-224ENST00000591764 SNAP25P60880 206 aa9.63□□□□□ -0.87
DNMT1-224ENST00000591764 TAP1Q03518 808 aa9.63□□□□□ -0.87
DNMT1-224ENST00000591764 TSHZ3Q63HK5 1081 aa9.63□□□□□ -0.87
DNMT1-224ENST00000591764 ZNF385CQ66K41 422 aaPredicted RBP9.63□□□□□ -0.87
DNMT1-224ENST00000591764 CRBNQ96SW2 442 aa9.63□□□□□ -0.87
DNMT1-224ENST00000591764 DCTPP1Q9H773 170 aa9.63□□□□□ -0.87
DNMT1-224ENST00000591764 CERS4Q9HA82 394 aa9.63□□□□□ -0.87
DNMT1-224ENST00000591764 LMCD1Q9NZU5 365 aa9.63□□□□□ -0.87
DNMT1-224ENST00000591764 TRANK1O15050 2925 aa9.62□□□□□ -0.87
DNMT1-224ENST00000591764 BRWD1Q9NSI6 2320 aa9.62□□□□□ -0.87
DNMT1-224ENST00000591764 WDR19Q8NEZ3 1342 aa9.62□□□□□ -0.87
DNMT1-224ENST00000591764 A6NJR5 290 aa9.62□□□□□ -0.87
DNMT1-224ENST00000591764 NFIBO00712 420 aa9.62□□□□□ -0.87
DNMT1-224ENST00000591764 ORC4O43929 436 aa9.62□□□□□ -0.87
DNMT1-224ENST00000591764 GPR37L1O60883 481 aa9.62□□□□□ -0.87
DNMT1-224ENST00000591764 TXNP10599 105 aaKnown RBP9.62□□□□□ -0.87
DNMT1-224ENST00000591764 RHOQP17081 205 aa9.62□□□□□ -0.87
DNMT1-224ENST00000591764 PTGS1P23219 599 aa9.62□□□□□ -0.87
DNMT1-224ENST00000591764 CHMP4BP1P59074 171 aa9.62□□□□□ -0.87
DNMT1-224ENST00000591764 PTGISQ16647 500 aa9.62□□□□□ -0.87
DNMT1-224ENST00000591764 ZMYM1Q5SVZ6 1142 aa9.62□□□□□ -0.87
DNMT1-224ENST00000591764 BTNL9Q6UXG8 535 aa9.62□□□□□ -0.87
DNMT1-224ENST00000591764 LYSMD3Q7Z3D4 306 aa9.62□□□□□ -0.87
DNMT1-224ENST00000591764 PRICKLE2Q7Z3G6 844 aa9.62□□□□□ -0.87
DNMT1-224ENST00000591764 KATNAL1Q9BW62 490 aa9.62□□□□□ -0.87
DNMT1-224ENST00000591764 MAF1Q9H063 256 aa9.62□□□□□ -0.87
DNMT1-224ENST00000591764 ANAPC4Q9UJX5 808 aa9.62□□□□□ -0.87
DNMT1-224ENST00000591764 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.62□□□□□ -0.87
DNMT1-224ENST00000591764 PIEZO1Q92508 2521 aa9.61□□□□□ -0.87
DNMT1-224ENST00000591764 RFXAPO00287 272 aa9.61□□□□□ -0.87
DNMT1-224ENST00000591764 NMT2O60551 498 aa9.61□□□□□ -0.87
DNMT1-224ENST00000591764 PCP11498 1178 aaKnown RBP9.61□□□□□ -0.87
DNMT1-224ENST00000591764 SELPP16109 830 aa9.61□□□□□ -0.87
DNMT1-224ENST00000591764 MX1P20591 662 aa9.61□□□□□ -0.87
DNMT1-224ENST00000591764 CASTP20810 708 aaKnown RBP9.61□□□□□ -0.87
DNMT1-224ENST00000591764 SLC16A2P36021 539 aa9.61□□□□□ -0.87
DNMT1-224ENST00000591764 NT5C2P49902 561 aa9.61□□□□□ -0.87
DNMT1-224ENST00000591764 RPS6P62753 249 aaKnown RBP9.61□□□□□ -0.87
DNMT1-224ENST00000591764 KCNMA1Q12791 1236 aa9.61□□□□□ -0.87
DNMT1-224ENST00000591764 GRB10Q13322 594 aa9.61□□□□□ -0.87
DNMT1-224ENST00000591764 RRP12Q5JTH9 1297 aaKnown RBP9.61□□□□□ -0.87
DNMT1-224ENST00000591764 GPATCH4Q5T3I0 446 aaKnown RBP9.61□□□□□ -0.87
DNMT1-224ENST00000591764 CNKSR3Q6P9H4 555 aa9.61□□□□□ -0.87
DNMT1-224ENST00000591764 SLC30A10Q6XR72 485 aa9.61□□□□□ -0.87
DNMT1-224ENST00000591764 LRRC8DQ7L1W4 858 aa9.61□□□□□ -0.87
DNMT1-224ENST00000591764 TGS1Q96RS0 853 aaKnown RBP9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms