RNA–Protein interactions for RNA: ENST00000589417.1

H3F3B-207, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-207ENST00000589417 EMSYQ7Z589 1322 aa19.97■□□□□ 0.79
H3F3B-207ENST00000589417 IPO5O00410 1097 aaKnown RBP19.96■□□□□ 0.79
H3F3B-207ENST00000589417 C16orf59Q7L2K0 433 aa19.96■□□□□ 0.79
H3F3B-207ENST00000589417 BACH2Q9BYV9 841 aa19.96■□□□□ 0.79
H3F3B-207ENST00000589417 PPP1R12CQ9BZL4 782 aa19.96■□□□□ 0.79
H3F3B-207ENST00000589417 SMARCAD1Q9H4L7 1026 aa19.96■□□□□ 0.79
H3F3B-207ENST00000589417 UMODL1Q5DID0 1318 aa19.96■□□□□ 0.79
H3F3B-207ENST00000589417 IGKV6D-21A0A0A0MT36 114 aa19.95■□□□□ 0.78
H3F3B-207ENST00000589417 JAK2O60674 1132 aa19.95■□□□□ 0.78
H3F3B-207ENST00000589417 CSF2RAP15509 400 aa19.95■□□□□ 0.78
H3F3B-207ENST00000589417 ACTR2P61160 394 aa19.95■□□□□ 0.78
H3F3B-207ENST00000589417 ADAM17P78536 824 aa19.95■□□□□ 0.78
H3F3B-207ENST00000589417 PTK7Q13308 1070 aa19.95■□□□□ 0.78
H3F3B-207ENST00000589417 BFSP2Q13515 415 aa19.95■□□□□ 0.78
H3F3B-207ENST00000589417 HIC1Q14526 733 aa19.95■□□□□ 0.78
H3F3B-207ENST00000589417 NONOQ15233 471 aaKnown RBP eCLIP19.95■□□□□ 0.784e-7■□□□□ 9.8
H3F3B-207ENST00000589417 SHHQ15465 462 aa19.95■□□□□ 0.78
H3F3B-207ENST00000589417 Q4G0T1 1027 aa19.95■□□□□ 0.78
H3F3B-207ENST00000589417 PLPPR4Q7Z2D5 763 aa19.95■□□□□ 0.78
H3F3B-207ENST00000589417 PPP1R13LQ8WUF5 828 aa19.95■□□□□ 0.78
H3F3B-207ENST00000589417 PCYT2Q99447 389 aa19.95■□□□□ 0.78
H3F3B-207ENST00000589417 RNPEPQ9H4A4 650 aa19.95■□□□□ 0.78
H3F3B-207ENST00000589417 IL23AQ9NPF7 189 aa19.95■□□□□ 0.78
H3F3B-207ENST00000589417 GJB4Q9NTQ9 266 aa19.95■□□□□ 0.78
H3F3B-207ENST00000589417 ERAP1Q9NZ08 941 aa19.95■□□□□ 0.78
H3F3B-207ENST00000589417 PKD2L1Q9P0L9 805 aa19.95■□□□□ 0.78
H3F3B-207ENST00000589417 NOD1Q9Y239 953 aa19.95■□□□□ 0.78
H3F3B-207ENST00000589417 MYH7BA7E2Y1 1941 aa19.95■□□□□ 0.78
H3F3B-207ENST00000589417 ST18O60284 1047 aa19.94■□□□□ 0.78
H3F3B-207ENST00000589417 SMIM10L2AP0DMW4 78 aa19.94■□□□□ 0.78
H3F3B-207ENST00000589417 SMIM10L2BP0DMW5 78 aa19.94■□□□□ 0.78
H3F3B-207ENST00000589417 RFC2P35250 354 aa19.94■□□□□ 0.78
H3F3B-207ENST00000589417 SP4Q02446 784 aa19.94■□□□□ 0.78
H3F3B-207ENST00000589417 PRR16Q569H4 304 aa19.94■□□□□ 0.78
H3F3B-207ENST00000589417 C9orf50Q5SZB4 431 aa19.94■□□□□ 0.78
H3F3B-207ENST00000589417 UTP14CQ5TAP6 766 aaKnown RBP19.94■□□□□ 0.78
H3F3B-207ENST00000589417 GPR153Q6NV75 609 aa19.94■□□□□ 0.78
H3F3B-207ENST00000589417 ABHD15Q6UXT9 468 aa19.94■□□□□ 0.78
H3F3B-207ENST00000589417 SERINC5Q86VE9 423 aa19.94■□□□□ 0.78
H3F3B-207ENST00000589417 TRIM50Q86XT4 487 aa19.94■□□□□ 0.78
H3F3B-207ENST00000589417 AFAP1L1Q8TED9 768 aa19.94■□□□□ 0.78
H3F3B-207ENST00000589417 VWCEQ96DN2 955 aa19.94■□□□□ 0.78
H3F3B-207ENST00000589417 ZNF577Q9BSK1 485 aa19.94■□□□□ 0.78
H3F3B-207ENST00000589417 NRCAMQ92823 1304 aa19.94■□□□□ 0.78
H3F3B-207ENST00000589417 C17orf102A2RUQ5 167 aa19.93■□□□□ 0.78
H3F3B-207ENST00000589417 CCNE2O96020 404 aa19.93■□□□□ 0.78
H3F3B-207ENST00000589417 PFKMP08237 780 aa19.93■□□□□ 0.78
H3F3B-207ENST00000589417 GNAT1P11488 350 aa19.93■□□□□ 0.78
H3F3B-207ENST00000589417 SLC26A2P50443 739 aa19.93■□□□□ 0.78
H3F3B-207ENST00000589417 CHMP4BP1P59074 171 aa19.93■□□□□ 0.78
H3F3B-207ENST00000589417 TRIM71Q2Q1W2 868 aaKnown RBP19.93■□□□□ 0.78
H3F3B-207ENST00000589417 TMEM240Q5SV17 173 aa19.93■□□□□ 0.78
H3F3B-207ENST00000589417 RASIP1Q5U651 963 aa19.93■□□□□ 0.78
H3F3B-207ENST00000589417 ZNF746Q6NUN9 644 aaPredicted RBP19.93■□□□□ 0.78
H3F3B-207ENST00000589417 RPUSD2Q8IZ73 545 aaKnown RBP19.93■□□□□ 0.78
H3F3B-207ENST00000589417 CCDC155Q8N6L0 562 aa19.93■□□□□ 0.78
H3F3B-207ENST00000589417 DHX38Q92620 1227 aaKnown RBP19.93■□□□□ 0.78
H3F3B-207ENST00000589417 TNFRSF25Q93038 417 aa19.93■□□□□ 0.78
H3F3B-207ENST00000589417 RIT2Q99578 217 aa19.93■□□□□ 0.78
H3F3B-207ENST00000589417 MSH4O15457 936 aa19.92■□□□□ 0.78
H3F3B-207ENST00000589417 DTNBO60941 627 aa19.92■□□□□ 0.78
H3F3B-207ENST00000589417 PARNO95453 639 aaKnown RBP19.92■□□□□ 0.78
H3F3B-207ENST00000589417 MMP1P03956 469 aa19.92■□□□□ 0.78
H3F3B-207ENST00000589417 IQCF3P0C7M6 154 aa19.92■□□□□ 0.78
H3F3B-207ENST00000589417 MCM2P49736 904 aa19.92■□□□□ 0.78
H3F3B-207ENST00000589417 CCL23P55773 120 aa19.92■□□□□ 0.78
H3F3B-207ENST00000589417 HMGN5P82970 282 aaKnown RBP19.92■□□□□ 0.78
H3F3B-207ENST00000589417 PPP4R3AQ6IN85 833 aa19.92■□□□□ 0.78
H3F3B-207ENST00000589417 PSRC1Q6PGN9 363 aaPredicted RBP19.92■□□□□ 0.78
H3F3B-207ENST00000589417 CCDC83Q8IWF9 413 aa19.92■□□□□ 0.78
H3F3B-207ENST00000589417 SMAP1Q8IYB5 467 aaPredicted RBP19.92■□□□□ 0.78
H3F3B-207ENST00000589417 RETREG2Q8NC44 543 aa19.92■□□□□ 0.78
H3F3B-207ENST00000589417 OXER1Q8TDS5 423 aa19.92■□□□□ 0.78
H3F3B-207ENST00000589417 SLC5A5Q92911 643 aa19.92■□□□□ 0.78
H3F3B-207ENST00000589417 CCDC194A0A1B0GVG4 234 aa19.91■□□□□ 0.78
H3F3B-207ENST00000589417 STAT5BP51692 787 aa19.91■□□□□ 0.78
H3F3B-207ENST00000589417 ZNF200P98182 395 aaPredicted RBP19.91■□□□□ 0.78
H3F3B-207ENST00000589417 KRT76Q01546 638 aa19.91■□□□□ 0.78
H3F3B-207ENST00000589417 RPAINQ86UA6 219 aa19.91■□□□□ 0.78
H3F3B-207ENST00000589417 GLG1Q92896 1179 aa19.91■□□□□ 0.78
H3F3B-207ENST00000589417 TNPO1Q92973 898 aaKnown RBP19.91■□□□□ 0.78
H3F3B-207ENST00000589417 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.91■□□□□ 0.786e-23■□□□□ 9.8
H3F3B-207ENST00000589417 AZI2Q9H6S1 392 aa19.91■□□□□ 0.78
H3F3B-207ENST00000589417 BRMS1Q9HCU9 246 aa19.91■□□□□ 0.78
H3F3B-207ENST00000589417 SOX1O00570 391 aaPredicted RBP19.9■□□□□ 0.78
H3F3B-207ENST00000589417 CAND2O75155 1236 aa19.9■□□□□ 0.78
H3F3B-207ENST00000589417 CKBP12277 381 aa19.9■□□□□ 0.78
H3F3B-207ENST00000589417 SELPP16109 830 aa19.9■□□□□ 0.78
H3F3B-207ENST00000589417 GCFC2P16383 781 aaKnown RBP19.9■□□□□ 0.78
H3F3B-207ENST00000589417 KRT2P35908 639 aa19.9■□□□□ 0.78
H3F3B-207ENST00000589417 INF2Q27J81 1249 aa19.9■□□□□ 0.78
H3F3B-207ENST00000589417 KRT40Q6A162 431 aa19.9■□□□□ 0.78
H3F3B-207ENST00000589417 TRAF7Q6Q0C0 670 aa19.9■□□□□ 0.78
H3F3B-207ENST00000589417 B3GNT9Q6UX72 402 aa19.9■□□□□ 0.78
H3F3B-207ENST00000589417 NEK8Q86SG6 692 aa19.9■□□□□ 0.78
H3F3B-207ENST00000589417 HERVK_113Q902F9 699 aa19.9■□□□□ 0.78
H3F3B-207ENST00000589417 ATP6V0A1Q93050 837 aa19.9■□□□□ 0.78
H3F3B-207ENST00000589417 NAP1L4Q99733 375 aaKnown RBP19.9■□□□□ 0.78
H3F3B-207ENST00000589417 SETD4Q9NVD3 440 aa19.9■□□□□ 0.78
H3F3B-207ENST00000589417 MBLAC1A4D2B0 266 aaPredicted RBP19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms