RNA–Protein interactions for RNA: ENST00000589214.1

ERCC1-209, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 3

Gene ERCC1, Length 674 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-209ENST00000589214 CYP2W1Q8TAV3 490 aa17.35■□□□□ 0.37
ERCC1-209ENST00000589214 PBX4Q9BYU1 374 aa17.35■□□□□ 0.37
ERCC1-209ENST00000589214 FTOQ9C0B1 505 aaKnown RBP eCLIP17.35■□□□□ 0.37
ERCC1-209ENST00000589214 ZMYND12Q9H0C1 365 aa17.35■□□□□ 0.37
ERCC1-209ENST00000589214 C6orf50Q9HD87 102 aa17.35■□□□□ 0.37
ERCC1-209ENST00000589214 KCNH7Q9NS40 1196 aa17.35■□□□□ 0.37
ERCC1-209ENST00000589214 CTDNEP1O95476 244 aa17.34■□□□□ 0.37
ERCC1-209ENST00000589214 CKBP12277 381 aa17.34■□□□□ 0.37
ERCC1-209ENST00000589214 ZNF76P36508 570 aa17.34■□□□□ 0.37
ERCC1-209ENST00000589214 RBM25P49756 843 aaKnown RBP17.34■□□□□ 0.37
ERCC1-209ENST00000589214 CEP55Q53EZ4 464 aa17.34■□□□□ 0.37
ERCC1-209ENST00000589214 RASGRP4Q8TDF6 673 aa17.34■□□□□ 0.37
ERCC1-209ENST00000589214 TIFAQ96CG3 184 aa17.34■□□□□ 0.37
ERCC1-209ENST00000589214 JPH1Q9HDC5 661 aaPredicted RBP17.34■□□□□ 0.37
ERCC1-209ENST00000589214 STXBP5LQ9Y2K9 1186 aa17.34■□□□□ 0.37
ERCC1-209ENST00000589214 TMEM265A0A087WTH1 108 aa17.33■□□□□ 0.36
ERCC1-209ENST00000589214 RBAK-RBAKDNI3L0D1 243 aa17.33■□□□□ 0.36
ERCC1-209ENST00000589214 MAFGO15525 162 aa17.33■□□□□ 0.36
ERCC1-209ENST00000589214 DEXIO95424 95 aa17.33■□□□□ 0.36
ERCC1-209ENST00000589214 ARP10275 920 aa17.33■□□□□ 0.36
ERCC1-209ENST00000589214 ACTN1P12814 892 aa17.33■□□□□ 0.36
ERCC1-209ENST00000589214 MARK3P27448 753 aa17.33■□□□□ 0.36
ERCC1-209ENST00000589214 TRIM71Q2Q1W2 868 aaKnown RBP17.33■□□□□ 0.36
ERCC1-209ENST00000589214 ATP6V0A1Q93050 837 aa17.33■□□□□ 0.36
ERCC1-209ENST00000589214 SDF4Q9BRK5 362 aa17.33■□□□□ 0.36
ERCC1-209ENST00000589214 SEMA6BQ9H3T3 888 aa17.33■□□□□ 0.36
ERCC1-209ENST00000589214 SLC4A7Q9Y6M7 1214 aa17.33■□□□□ 0.36
ERCC1-209ENST00000589214 GSTTP1A0A1W2PQM5 241 aa17.32■□□□□ 0.36
ERCC1-209ENST00000589214 TREHO43280 583 aa17.32■□□□□ 0.36
ERCC1-209ENST00000589214 CDKL5O76039 1030 aa17.32■□□□□ 0.36
ERCC1-209ENST00000589214 GNA11P29992 359 aa17.32■□□□□ 0.36
ERCC1-209ENST00000589214 HOXC8P31273 242 aa17.32■□□□□ 0.36
ERCC1-209ENST00000589214 NLRP5P59047 1200 aa17.32■□□□□ 0.36
ERCC1-209ENST00000589214 ZNF618Q5T7W0 954 aa17.32■□□□□ 0.36
ERCC1-209ENST00000589214 SERINC5Q86VE9 423 aa17.32■□□□□ 0.36
ERCC1-209ENST00000589214 SEPT1Q8WYJ6 367 aa17.32■□□□□ 0.36
ERCC1-209ENST00000589214 GTF3C6Q969F1 213 aa17.32■□□□□ 0.36
ERCC1-209ENST00000589214 RNPEPQ9H4A4 650 aa17.32■□□□□ 0.36
ERCC1-209ENST00000589214 UPF2Q9HAU5 1272 aaKnown RBP17.32■□□□□ 0.36
ERCC1-209ENST00000589214 AGO4Q9HCK5 861 aaKnown RBP17.32■□□□□ 0.36
ERCC1-209ENST00000589214 GJB4Q9NTQ9 266 aa17.32■□□□□ 0.36
ERCC1-209ENST00000589214 SETD4Q9NVD3 440 aa17.32■□□□□ 0.36
ERCC1-209ENST00000589214 SLC9A2Q9UBY0 812 aa17.32■□□□□ 0.36
ERCC1-209ENST00000589214 NFASCO94856 1347 aa17.31■□□□□ 0.36
ERCC1-209ENST00000589214 FAM86B1E9PN63 330 aa17.31■□□□□ 0.36
ERCC1-209ENST00000589214 DDX39AO00148 427 aaKnown RBP17.31■□□□□ 0.36
ERCC1-209ENST00000589214 FAM86B2P0C5J1 330 aa17.31■□□□□ 0.36
ERCC1-209ENST00000589214 ATP2A2P16615 1042 aaKnown RBP17.31■□□□□ 0.36
ERCC1-209ENST00000589214 THPOP40225 353 aa17.31■□□□□ 0.36
ERCC1-209ENST00000589214 RABGGTBP53611 331 aa17.31■□□□□ 0.36
ERCC1-209ENST00000589214 ITGB3BPQ13352 177 aaPredicted RBP17.31■□□□□ 0.36
ERCC1-209ENST00000589214 RAB30Q15771 203 aa17.31■□□□□ 0.36
ERCC1-209ENST00000589214 MCTP2Q6DN12 878 aa17.31■□□□□ 0.36
ERCC1-209ENST00000589214 TRAF7Q6Q0C0 670 aa17.31■□□□□ 0.36
ERCC1-209ENST00000589214 PLA2G4DQ86XP0 818 aa17.31■□□□□ 0.36
ERCC1-209ENST00000589214 TET1Q8NFU7 2136 aa17.31■□□□□ 0.36
ERCC1-209ENST00000589214 BICD2Q8TD16 824 aa17.31■□□□□ 0.36
ERCC1-209ENST00000589214 LMBR1Q8WVP7 490 aa17.31■□□□□ 0.36
ERCC1-209ENST00000589214 MYLIPQ8WY64 445 aa17.31■□□□□ 0.36
ERCC1-209ENST00000589214 GLG1Q92896 1179 aa17.31■□□□□ 0.36
ERCC1-209ENST00000589214 CDX2Q99626 313 aaPredicted RBP17.31■□□□□ 0.36
ERCC1-209ENST00000589214 SH3GLB2Q9NR46 395 aa17.31■□□□□ 0.36
ERCC1-209ENST00000589214 ORC3Q9UBD5 711 aaPredicted RBP17.31■□□□□ 0.36
ERCC1-209ENST00000589214 KCNJ14Q9UNX9 436 aa17.31■□□□□ 0.36
ERCC1-209ENST00000589214 LIMCH1Q9UPQ0 1083 aa17.31■□□□□ 0.36
ERCC1-209ENST00000589214 EMSYQ7Z589 1322 aa17.3■□□□□ 0.36
ERCC1-209ENST00000589214 MEIS1O00470 390 aa17.3■□□□□ 0.36
ERCC1-209ENST00000589214 JAK2O60674 1132 aa17.3■□□□□ 0.36
ERCC1-209ENST00000589214 NBNO60934 754 aa17.3■□□□□ 0.36
ERCC1-209ENST00000589214 CTSHP09668 335 aa17.3■□□□□ 0.36
ERCC1-209ENST00000589214 GNAT1P11488 350 aa17.3■□□□□ 0.36
ERCC1-209ENST00000589214 FDPSP14324 419 aaKnown RBP17.3■□□□□ 0.36
ERCC1-209ENST00000589214 ST3GAL1Q11201 340 aa17.3■□□□□ 0.36
ERCC1-209ENST00000589214 GPNMBQ14956 572 aa17.3■□□□□ 0.36
ERCC1-209ENST00000589214 NIPA1Q7RTP0 329 aa17.3■□□□□ 0.36
ERCC1-209ENST00000589214 CRYGNQ8WXF5 182 aa17.3■□□□□ 0.36
ERCC1-209ENST00000589214 UIMC1Q96RL1 719 aa17.3■□□□□ 0.36
ERCC1-209ENST00000589214 NKX2-4Q9H2Z4 354 aa17.3■□□□□ 0.36
ERCC1-209ENST00000589214 ZNF576Q9H609 170 aa17.3■□□□□ 0.36
ERCC1-209ENST00000589214 ERAP1Q9NZ08 941 aa17.3■□□□□ 0.36
ERCC1-209ENST00000589214 MSRAQ9UJ68 235 aa17.3■□□□□ 0.36
ERCC1-209ENST00000589214 YBX2Q9Y2T7 364 aaKnown RBP17.3■□□□□ 0.36
ERCC1-209ENST00000589214 PTPRSQ13332 1948 aa17.29■□□□□ 0.36
ERCC1-209ENST00000589214 IGLV3-22A0A075B6J6 115 aa17.29■□□□□ 0.36
ERCC1-209ENST00000589214 PARNO95453 639 aaKnown RBP17.29■□□□□ 0.36
ERCC1-209ENST00000589214 ACTR2P61160 394 aa17.29■□□□□ 0.36
ERCC1-209ENST00000589214 PPFIA1Q13136 1202 aa17.29■□□□□ 0.36
ERCC1-209ENST00000589214 MBTPS1Q14703 1052 aa17.29■□□□□ 0.36
ERCC1-209ENST00000589214 CCDC83Q8IWF9 413 aa17.29■□□□□ 0.36
ERCC1-209ENST00000589214 NSUN7Q8NE18 718 aaKnown RBP17.29■□□□□ 0.36
ERCC1-209ENST00000589214 SLC9A7Q96T83 725 aa17.29■□□□□ 0.36
ERCC1-209ENST00000589214 PCYT2Q99447 389 aa17.29■□□□□ 0.36
ERCC1-209ENST00000589214 SMARCAD1Q9H4L7 1026 aa17.29■□□□□ 0.36
ERCC1-209ENST00000589214 NRCAMQ92823 1304 aa17.28■□□□□ 0.36
ERCC1-209ENST00000589214 STK36Q9NRP7 1315 aa17.28■□□□□ 0.36
ERCC1-209ENST00000589214 RSPH10B2B2RC85 870 aa17.28■□□□□ 0.36
ERCC1-209ENST00000589214 LGR5O75473 907 aa17.28■□□□□ 0.36
ERCC1-209ENST00000589214 BAIAP3O94812 1187 aa17.28■□□□□ 0.36
ERCC1-209ENST00000589214 CXCL10P02778 98 aa17.28■□□□□ 0.36
ERCC1-209ENST00000589214 CYP3A4P08684 503 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms