RNA–Protein interactions for RNA: ENST00000588972.1

ATG4D-210, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 632 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-210ENST00000588972 EMC9Q9Y3B6 208 aa9.65□□□□□ -0.86
ATG4D-210ENST00000588972 SNED1Q8TER0 1413 aa9.65□□□□□ -0.87
ATG4D-210ENST00000588972 KRBA1A5PL33 1030 aa9.64□□□□□ -0.87
ATG4D-210ENST00000588972 ALG1L2C9J202 215 aa9.64□□□□□ -0.87
ATG4D-210ENST00000588972 FZD9O00144 591 aa9.64□□□□□ -0.87
ATG4D-210ENST00000588972 NOP56O00567 594 aaKnown RBP9.64□□□□□ -0.87
ATG4D-210ENST00000588972 MAP7Q14244 749 aa9.64□□□□□ -0.87
ATG4D-210ENST00000588972 FMNL3Q8IVF7 1028 aa9.64□□□□□ -0.87
ATG4D-210ENST00000588972 ADCY4Q8NFM4 1077 aa9.64□□□□□ -0.87
ATG4D-210ENST00000588972 SLC7A14Q8TBB6 771 aa9.64□□□□□ -0.87
ATG4D-210ENST00000588972 DDX1Q92499 740 aaKnown RBP9.64□□□□□ -0.87
ATG4D-210ENST00000588972 KREMEN1Q96MU8 473 aa9.64□□□□□ -0.87
ATG4D-210ENST00000588972 TRIM39Q9HCM9 518 aa9.64□□□□□ -0.87
ATG4D-210ENST00000588972 PCOLCE2Q9UKZ9 415 aa9.64□□□□□ -0.87
ATG4D-210ENST00000588972 AKT3Q9Y243 479 aa9.64□□□□□ -0.87
ATG4D-210ENST00000588972 LAS1LQ9Y4W2 734 aaKnown RBP9.64□□□□□ -0.87
ATG4D-210ENST00000588972 LTBP1Q14766 1721 aa9.64□□□□□ -0.87
ATG4D-210ENST00000588972 ITGA4P13612 1032 aa9.63□□□□□ -0.87
ATG4D-210ENST00000588972 RNF4P78317 190 aa9.63□□□□□ -0.87
ATG4D-210ENST00000588972 OLFM4Q6UX06 510 aa9.63□□□□□ -0.87
ATG4D-210ENST00000588972 ARHGEF39Q8N4T4 335 aa9.63□□□□□ -0.87
ATG4D-210ENST00000588972 BTN2A2Q8WVV5 523 aa9.63□□□□□ -0.87
ATG4D-210ENST00000588972 IRF7Q92985 503 aa9.63□□□□□ -0.87
ATG4D-210ENST00000588972 TRIM11Q96F44 468 aa9.63□□□□□ -0.87
ATG4D-210ENST00000588972 PSMD1Q99460 953 aa9.63□□□□□ -0.87
ATG4D-210ENST00000588972 DDX21Q9NR30 783 aaKnown RBP eCLIP9.63□□□□□ -0.87
ATG4D-210ENST00000588972 TSPYL4Q9UJ04 414 aa9.63□□□□□ -0.87
ATG4D-210ENST00000588972 TRPM7Q96QT4 1865 aa9.63□□□□□ -0.87
ATG4D-210ENST00000588972 PDE4DIPQ5VU43 2346 aa9.62□□□□□ -0.87
ATG4D-210ENST00000588972 COL4A5P29400 1685 aa9.62□□□□□ -0.87
ATG4D-210ENST00000588972 CCER2I3L3R5 266 aa9.62□□□□□ -0.87
ATG4D-210ENST00000588972 ALDH1B1P30837 517 aa9.62□□□□□ -0.87
ATG4D-210ENST00000588972 ECE1P42892 770 aa9.62□□□□□ -0.87
ATG4D-210ENST00000588972 PIP4K2AP48426 406 aaPredicted RBP9.62□□□□□ -0.87
ATG4D-210ENST00000588972 EIF4A1P60842 406 aaKnown RBP9.62□□□□□ -0.87
ATG4D-210ENST00000588972 FDX2Q6P4F2 183 aa9.62□□□□□ -0.87
ATG4D-210ENST00000588972 STRA8Q7Z7C7 330 aa9.62□□□□□ -0.87
ATG4D-210ENST00000588972 ATL2Q8NHH9 583 aa9.62□□□□□ -0.87
ATG4D-210ENST00000588972 CAPNS2Q96L46 248 aa9.62□□□□□ -0.87
ATG4D-210ENST00000588972 MRPL18Q9H0U6 180 aaKnown RBP9.62□□□□□ -0.87
ATG4D-210ENST00000588972 CGGBP1Q9UFW8 167 aaPredicted RBP9.62□□□□□ -0.87
ATG4D-210ENST00000588972 NDOR1Q9UHB4 597 aa9.62□□□□□ -0.87
ATG4D-210ENST00000588972 NIP7Q9Y221 180 aaKnown RBP eCLIP9.62□□□□□ -0.87
ATG4D-210ENST00000588972 DLX3O60479 287 aa9.61□□□□□ -0.87
ATG4D-210ENST00000588972 EYA4O95677 639 aa9.61□□□□□ -0.87
ATG4D-210ENST00000588972 ZNF445P59923 1031 aa9.61□□□□□ -0.87
ATG4D-210ENST00000588972 KRT24Q2M2I5 525 aa9.61□□□□□ -0.87
ATG4D-210ENST00000588972 ANKRD34AQ69YU3 496 aa9.61□□□□□ -0.87
ATG4D-210ENST00000588972 POMZP3Q6PJE2 187 aa9.61□□□□□ -0.87
ATG4D-210ENST00000588972 IGF2-ASQ6U949 168 aa9.61□□□□□ -0.87
ATG4D-210ENST00000588972 BRAPQ7Z569 592 aa9.61□□□□□ -0.87
ATG4D-210ENST00000588972 SYNE4Q8N205 404 aa9.61□□□□□ -0.87
ATG4D-210ENST00000588972 PPM1KQ8N3J5 372 aa9.61□□□□□ -0.87
ATG4D-210ENST00000588972 CRACR2BQ8N4Y2 399 aaPredicted RBP9.61□□□□□ -0.87
ATG4D-210ENST00000588972 GSTCDQ8NEC7 633 aa9.61□□□□□ -0.87
ATG4D-210ENST00000588972 USP16Q9Y5T5 823 aa9.61□□□□□ -0.87
ATG4D-210ENST00000588972 RIC1Q4ADV7 1423 aa9.61□□□□□ -0.87
ATG4D-210ENST00000588972 ABCC12Q96J65 1359 aa9.61□□□□□ -0.87
ATG4D-210ENST00000588972 TNRC18O15417 2968 aaPredicted RBP9.6□□□□□ -0.87
ATG4D-210ENST00000588972 SNRPA1P09661 255 aaKnown RBP9.6□□□□□ -0.87
ATG4D-210ENST00000588972 RGS19P49795 217 aa9.6□□□□□ -0.87
ATG4D-210ENST00000588972 SF1Q15637 639 aaKnown RBP9.6□□□□□ -0.87
ATG4D-210ENST00000588972 CRY2Q49AN0 593 aa9.6□□□□□ -0.87
ATG4D-210ENST00000588972 WWC2Q6AWC2 1192 aa9.6□□□□□ -0.87
ATG4D-210ENST00000588972 LETMD1Q6P1Q0 360 aa9.6□□□□□ -0.87
ATG4D-210ENST00000588972 DDX46Q7L014 1031 aaKnown RBP9.6□□□□□ -0.87
ATG4D-210ENST00000588972 RAVER1Q8IY67 606 aaKnown RBP9.6□□□□□ -0.87
ATG4D-210ENST00000588972 RIN3Q8TB24 985 aa9.6□□□□□ -0.87
ATG4D-210ENST00000588972 GPR101Q96P66 508 aaPredicted RBP9.6□□□□□ -0.87
ATG4D-210ENST00000588972 MIPEPQ99797 713 aa9.6□□□□□ -0.87
ATG4D-210ENST00000588972 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.59□□□□□ -0.87
ATG4D-210ENST00000588972 CHL1O00533 1208 aa9.59□□□□□ -0.87
ATG4D-210ENST00000588972 CA12O43570 354 aa9.59□□□□□ -0.87
ATG4D-210ENST00000588972 KCNH1O95259 989 aa9.59□□□□□ -0.87
ATG4D-210ENST00000588972 POU3F2P20265 443 aaPredicted RBP9.59□□□□□ -0.87
ATG4D-210ENST00000588972 GABREP78334 506 aa9.59□□□□□ -0.87
ATG4D-210ENST00000588972 GRM1Q13255 1194 aa9.59□□□□□ -0.87
ATG4D-210ENST00000588972 GTF2IRD2BQ6EKJ0 949 aa9.59□□□□□ -0.87
ATG4D-210ENST00000588972 CYP4F22Q6NT55 531 aa9.59□□□□□ -0.87
ATG4D-210ENST00000588972 USP50Q70EL3 339 aaPredicted RBP9.59□□□□□ -0.87
ATG4D-210ENST00000588972 FGD2Q7Z6J4 655 aa9.59□□□□□ -0.87
ATG4D-210ENST00000588972 CDH24Q86UP0 819 aa9.59□□□□□ -0.87
ATG4D-210ENST00000588972 GTF2IRD2Q86UP8 949 aa9.59□□□□□ -0.87
ATG4D-210ENST00000588972 AGGF1Q8N302 714 aaeCLIP9.59□□□□□ -0.87
ATG4D-210ENST00000588972 WHAMMQ8TF30 809 aa9.59□□□□□ -0.87
ATG4D-210ENST00000588972 LEO1Q8WVC0 666 aaPredicted RBP9.59□□□□□ -0.87
ATG4D-210ENST00000588972 RNF141Q8WVD5 230 aa9.59□□□□□ -0.87
ATG4D-210ENST00000588972 BRF1Q92994 677 aa9.59□□□□□ -0.87
ATG4D-210ENST00000588972 FBXL18Q96ME1 805 aa9.59□□□□□ -0.87
ATG4D-210ENST00000588972 ASPNQ9BXN1 380 aa9.59□□□□□ -0.87
ATG4D-210ENST00000588972 NYXQ9GZU5 481 aa9.59□□□□□ -0.87
ATG4D-210ENST00000588972 ACSS3Q9H6R3 686 aa9.59□□□□□ -0.87
ATG4D-210ENST00000588972 FBXL21Q9UKT6 434 aa9.59□□□□□ -0.87
ATG4D-210ENST00000588972 PCDHB12Q9Y5F1 795 aa9.59□□□□□ -0.87
ATG4D-210ENST00000588972 TNPO3Q9Y5L0 923 aaKnown RBP9.59□□□□□ -0.87
ATG4D-210ENST00000588972 IBTKQ9P2D0 1353 aaPredicted RBP9.59□□□□□ -0.87
ATG4D-210ENST00000588972 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.58□□□□□ -0.88
ATG4D-210ENST00000588972 BLACEA4D250 179 aa9.58□□□□□ -0.88
ATG4D-210ENST00000588972 EFCAB14O75071 495 aa9.58□□□□□ -0.88
ATG4D-210ENST00000588972 SLITRK5O94991 958 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms