RNA–Protein interactions for RNA: ENST00000588210.1

CCDC43-203, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC43, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-203ENST00000588210 ADD3Q9UEY8 706 aaKnown RBP16.35■□□□□ 0.21
CCDC43-203ENST00000588210 PNMA6FA0A0J9YX94 578 aa16.34■□□□□ 0.21
CCDC43-203ENST00000588210 GRK4P32298 578 aa16.34■□□□□ 0.21
CCDC43-203ENST00000588210 SLC9C1Q4G0N8 1177 aa16.34■□□□□ 0.21
CCDC43-203ENST00000588210 ZNF771Q7L3S4 317 aaPredicted RBP16.34■□□□□ 0.21
CCDC43-203ENST00000588210 CREBRFQ8IUR6 639 aa16.34■□□□□ 0.21
CCDC43-203ENST00000588210 ANKRD35Q8N283 1001 aa16.34■□□□□ 0.21
CCDC43-203ENST00000588210 RRP36Q96EU6 259 aaKnown RBP16.34■□□□□ 0.21
CCDC43-203ENST00000588210 PYM1Q9BRP8 204 aaKnown RBP16.34■□□□□ 0.21
CCDC43-203ENST00000588210 ABCB11O95342 1321 aa16.34■□□□□ 0.21
CCDC43-203ENST00000588210 PPP1R3GB7ZBB8 358 aa16.34■□□□□ 0.21
CCDC43-203ENST00000588210 TEX33O43247 280 aa16.34■□□□□ 0.21
CCDC43-203ENST00000588210 CCDC175P0C221 793 aa16.34■□□□□ 0.21
CCDC43-203ENST00000588210 PNMA6AP0CW24 399 aaPredicted RBP16.34■□□□□ 0.21
CCDC43-203ENST00000588210 TRAPPC10P48553 1259 aa16.34■□□□□ 0.21
CCDC43-203ENST00000588210 USH1GQ495M9 461 aa16.34■□□□□ 0.21
CCDC43-203ENST00000588210 MUM1L1Q5H9M0 696 aa16.34■□□□□ 0.21
CCDC43-203ENST00000588210 TMCO3Q6UWJ1 677 aa16.34■□□□□ 0.21
CCDC43-203ENST00000588210 MAF1Q9H063 256 aa16.34■□□□□ 0.21
CCDC43-203ENST00000588210 ITIH6Q6UXX5 1313 aa16.34■□□□□ 0.21
CCDC43-203ENST00000588210 HTTP42858 3142 aa16.33■□□□□ 0.21
CCDC43-203ENST00000588210 hCG_1642624A0A1W2PR95 340 aa16.33■□□□□ 0.21
CCDC43-203ENST00000588210 COBLO75128 1261 aa16.33■□□□□ 0.21
CCDC43-203ENST00000588210 E2F4Q16254 413 aa16.33■□□□□ 0.21
CCDC43-203ENST00000588210 FAM177A1Q8N128 213 aaPredicted RBP16.33■□□□□ 0.21
CCDC43-203ENST00000588210 IGSF22Q8N9C0 903 aa16.33■□□□□ 0.21
CCDC43-203ENST00000588210 SEC63Q9UGP8 760 aaKnown RBP16.33■□□□□ 0.21
CCDC43-203ENST00000588210 DIS3Q9Y2L1 958 aaKnown RBP16.33■□□□□ 0.21
CCDC43-203ENST00000588210 ZNFX1Q9P2E3 1918 aaKnown RBP16.33■□□□□ 0.21
CCDC43-203ENST00000588210 PFASO15067 1338 aa16.33■□□□□ 0.2
CCDC43-203ENST00000588210 ATP8B1O43520 1251 aa16.33■□□□□ 0.2
CCDC43-203ENST00000588210 FECHP22830 423 aa16.33■□□□□ 0.2
CCDC43-203ENST00000588210 PPP2R3AQ06190 1150 aa16.33■□□□□ 0.2
CCDC43-203ENST00000588210 ZNF174Q15697 407 aa16.33■□□□□ 0.2
CCDC43-203ENST00000588210 FILIP1LQ4L180 1135 aa16.33■□□□□ 0.2
CCDC43-203ENST00000588210 KLHL10Q6JEL2 608 aa16.33■□□□□ 0.2
CCDC43-203ENST00000588210 RSRC2Q7L4I2 434 aaKnown RBP16.33■□□□□ 0.2
CCDC43-203ENST00000588210 PPFIBP1Q86W92 1011 aa16.33■□□□□ 0.2
CCDC43-203ENST00000588210 CLEC4DQ8WXI8 215 aa16.33■□□□□ 0.2
CCDC43-203ENST00000588210 CCDC51Q96ER9 411 aa16.33■□□□□ 0.2
CCDC43-203ENST00000588210 DESI2Q9BSY9 194 aa16.33■□□□□ 0.2
CCDC43-203ENST00000588210 MRPL44Q9H9J2 332 aaKnown RBP16.33■□□□□ 0.2
CCDC43-203ENST00000588210 A1CFQ9NQ94 594 aaKnown RBP16.33■□□□□ 0.2
CCDC43-203ENST00000588210 MRPL11Q9Y3B7 192 aaKnown RBP16.33■□□□□ 0.2
CCDC43-203ENST00000588210 SMCHD1A6NHR9 2005 aa16.32■□□□□ 0.2
CCDC43-203ENST00000588210 BAZ2BQ9UIF8 2168 aaKnown RBP16.32■□□□□ 0.2
CCDC43-203ENST00000588210 DNAJC25-GNG10A0A024R161 153 aa16.32■□□□□ 0.2
CCDC43-203ENST00000588210 MFAP3LO75121 409 aa16.32■□□□□ 0.2
CCDC43-203ENST00000588210 PGK2P07205 417 aa16.32■□□□□ 0.2
CCDC43-203ENST00000588210 TAL1P17542 331 aaPredicted RBP16.32■□□□□ 0.2
CCDC43-203ENST00000588210 CASP1P29466 404 aa16.32■□□□□ 0.2
CCDC43-203ENST00000588210 PTGDRQ13258 359 aa16.32■□□□□ 0.2
CCDC43-203ENST00000588210 GPR161Q8N6U8 529 aaKnown RBP16.32■□□□□ 0.2
CCDC43-203ENST00000588210 NPLOC4Q8TAT6 608 aa16.32■□□□□ 0.2
CCDC43-203ENST00000588210 ARMC5Q96C12 935 aa16.32■□□□□ 0.2
CCDC43-203ENST00000588210 PCDHA1Q9Y5I3 950 aa16.32■□□□□ 0.2
CCDC43-203ENST00000588210 SOWAHDA6NJG2 315 aa16.31■□□□□ 0.2
CCDC43-203ENST00000588210 PPP1R11O60927 126 aaPredicted RBP16.31■□□□□ 0.2
CCDC43-203ENST00000588210 SCG2P13521 617 aa16.31■□□□□ 0.2
CCDC43-203ENST00000588210 ELNP15502 786 aa16.31■□□□□ 0.2
CCDC43-203ENST00000588210 STX17P56962 302 aa16.31■□□□□ 0.2
CCDC43-203ENST00000588210 RBL2Q08999 1139 aa16.31■□□□□ 0.2
CCDC43-203ENST00000588210 MTF1Q14872 753 aa16.31■□□□□ 0.2
CCDC43-203ENST00000588210 ZNF792Q3KQV3 632 aa16.31■□□□□ 0.2
CCDC43-203ENST00000588210 PDXDC2PQ6P474 469 aa16.31■□□□□ 0.2
CCDC43-203ENST00000588210 IQUBQ8NA54 791 aa16.31■□□□□ 0.2
CCDC43-203ENST00000588210 SH3TC2Q8TF17 1288 aa16.31■□□□□ 0.2
CCDC43-203ENST00000588210 TRIB2Q92519 343 aa16.31■□□□□ 0.2
CCDC43-203ENST00000588210 CYP39A1Q9NYL5 469 aa16.31■□□□□ 0.2
CCDC43-203ENST00000588210 ADGRG1Q9Y653 693 aa16.31■□□□□ 0.2
CCDC43-203ENST00000588210 NFIBO00712 420 aa16.31■□□□□ 0.2
CCDC43-203ENST00000588210 HMGCRP04035 888 aa16.31■□□□□ 0.2
CCDC43-203ENST00000588210 OLFML2BQ68BL8 750 aa16.31■□□□□ 0.2
CCDC43-203ENST00000588210 RAD9BQ6WBX8 426 aa16.31■□□□□ 0.2
CCDC43-203ENST00000588210 NSMFQ6X4W1 530 aa16.31■□□□□ 0.2
CCDC43-203ENST00000588210 MCF2L2Q86YR7 1114 aa16.31■□□□□ 0.2
CCDC43-203ENST00000588210 CNGA4Q8IV77 575 aa16.31■□□□□ 0.2
CCDC43-203ENST00000588210 ABHD8Q96I13 439 aa16.31■□□□□ 0.2
CCDC43-203ENST00000588210 LIMA1Q9UHB6 759 aaKnown RBP16.31■□□□□ 0.2
CCDC43-203ENST00000588210 CTNND2Q9UQB3 1225 aa16.31■□□□□ 0.2
CCDC43-203ENST00000588210 CENPFP49454 3210 aa16.31■□□□□ 0.2
CCDC43-203ENST00000588210 GTPBP6O43824 516 aaPredicted RBP16.3■□□□□ 0.2
CCDC43-203ENST00000588210 PLA2G4AP47712 749 aa16.3■□□□□ 0.2
CCDC43-203ENST00000588210 UBXN2AP68543 259 aa16.3■□□□□ 0.2
CCDC43-203ENST00000588210 KARSQ15046 597 aaKnown RBP16.3■□□□□ 0.2
CCDC43-203ENST00000588210 CCL14Q16627 93 aa16.3■□□□□ 0.2
CCDC43-203ENST00000588210 PFKFB3Q16875 520 aaPredicted RBP16.3■□□□□ 0.2
CCDC43-203ENST00000588210 RNF207Q6ZRF8 634 aa16.3■□□□□ 0.2
CCDC43-203ENST00000588210 SMYD4Q8IYR2 804 aaPredicted RBP16.3■□□□□ 0.2
CCDC43-203ENST00000588210 RABGGTAQ92696 567 aa16.3■□□□□ 0.2
CCDC43-203ENST00000588210 MAML3Q96JK9 1138 aa16.3■□□□□ 0.2
CCDC43-203ENST00000588210 BIN2Q9UBW5 565 aaPredicted RBP16.3■□□□□ 0.2
CCDC43-203ENST00000588210 POTEB2H3BUK9 544 aa16.3■□□□□ 0.2
CCDC43-203ENST00000588210 SPAG1Q07617 926 aa16.3■□□□□ 0.2
CCDC43-203ENST00000588210 ZNF467Q7Z7K2 595 aaPredicted RBP16.3■□□□□ 0.2
CCDC43-203ENST00000588210 SAMD3Q8N6K7 520 aa16.3■□□□□ 0.2
CCDC43-203ENST00000588210 ZNF333Q96JL9 665 aa16.3■□□□□ 0.2
CCDC43-203ENST00000588210 RWDD2AQ9UIY3 292 aa16.3■□□□□ 0.2
CCDC43-203ENST00000588210 NLRP5P59047 1200 aa16.29■□□□□ 0.2
CCDC43-203ENST00000588210 BAATQ14032 418 aaPredicted RBP16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms