RNA–Protein interactions for RNA: ENST00000588009.1

TUBD1-208, Transcript of tubulin delta 1, humanhuman

TSL 3

Gene TUBD1, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-208ENST00000588009 PCDHGA8Q9Y5G5 932 aa7.12□□□□□ -1.27
TUBD1-208ENST00000588009 PCDHGA7Q9Y5G6 932 aa7.12□□□□□ -1.27
TUBD1-208ENST00000588009 PCDHGA6Q9Y5G7 932 aa7.12□□□□□ -1.27
TUBD1-208ENST00000588009 PCDHGA3Q9Y5H0 932 aa7.12□□□□□ -1.27
TUBD1-208ENST00000588009 PCDHGA2Q9Y5H1 932 aa7.12□□□□□ -1.27
TUBD1-208ENST00000588009 MRFAP1Q9Y605 127 aa7.12□□□□□ -1.27
TUBD1-208ENST00000588009 A0A1W2PQ45 241 aaPredicted RBP7.11□□□□□ -1.27
TUBD1-208ENST00000588009 A0A1W2PQY0 241 aa7.11□□□□□ -1.27
TUBD1-208ENST00000588009 VSTM5A8MXK1 200 aa7.11□□□□□ -1.27
TUBD1-208ENST00000588009 HIP1RO75146 1068 aa7.11□□□□□ -1.27
TUBD1-208ENST00000588009 DGKIO75912 1065 aa7.11□□□□□ -1.27
TUBD1-208ENST00000588009 LTFP02788 710 aa7.11□□□□□ -1.27
TUBD1-208ENST00000588009 CYP2C19P33261 490 aa7.11□□□□□ -1.27
TUBD1-208ENST00000588009 GPR3P46089 330 aa7.11□□□□□ -1.27
TUBD1-208ENST00000588009 ARTNQ5T4W7 220 aa7.11□□□□□ -1.27
TUBD1-208ENST00000588009 PPP4R4Q6NUP7 873 aa7.11□□□□□ -1.27
TUBD1-208ENST00000588009 KSR2Q6VAB6 950 aa7.11□□□□□ -1.27
TUBD1-208ENST00000588009 SMC5Q8IY18 1101 aa7.11□□□□□ -1.27
TUBD1-208ENST00000588009 PIP4K2CQ8TBX8 421 aa7.11□□□□□ -1.27
TUBD1-208ENST00000588009 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.11□□□□□ -1.27
TUBD1-208ENST00000588009 ASB11Q8WXH4 323 aa7.11□□□□□ -1.27
TUBD1-208ENST00000588009 MAP6Q96JE9 813 aa7.11□□□□□ -1.27
TUBD1-208ENST00000588009 MTA3Q9BTC8 594 aa7.11□□□□□ -1.27
TUBD1-208ENST00000588009 MS4A5Q9H3V2 200 aa7.11□□□□□ -1.27
TUBD1-208ENST00000588009 PCIF1Q9H4Z3 704 aa7.11□□□□□ -1.27
TUBD1-208ENST00000588009 SLC6A20Q9NP91 592 aa7.11□□□□□ -1.27
TUBD1-208ENST00000588009 ZFP64Q9NPA5 681 aa7.11□□□□□ -1.27
TUBD1-208ENST00000588009 ACSS2Q9NR19 701 aa7.11□□□□□ -1.27
TUBD1-208ENST00000588009 ZC3H7BQ9UGR2 993 aaKnown RBP7.11□□□□□ -1.27
TUBD1-208ENST00000588009 DSEQ9UL01 958 aa7.11□□□□□ -1.27
TUBD1-208ENST00000588009 SRPK3Q9UPE1 567 aa7.11□□□□□ -1.27
TUBD1-208ENST00000588009 RWDD3Q9Y3V2 267 aa7.11□□□□□ -1.27
TUBD1-208ENST00000588009 B3GALT1Q9Y5Z6 326 aa7.11□□□□□ -1.27
TUBD1-208ENST00000588009 KLHL33A6NCF5 533 aa7.1□□□□□ -1.27
TUBD1-208ENST00000588009 SCDO00767 359 aa7.1□□□□□ -1.27
TUBD1-208ENST00000588009 CLASP2O75122 1294 aaKnown RBP7.1□□□□□ -1.27
TUBD1-208ENST00000588009 H2AFYO75367 372 aaKnown RBP7.1□□□□□ -1.27
TUBD1-208ENST00000588009 FSTP19883 344 aa7.1□□□□□ -1.27
TUBD1-208ENST00000588009 PTX3P26022 381 aaPredicted RBP7.1□□□□□ -1.27
TUBD1-208ENST00000588009 PDCD1Q15116 288 aa7.1□□□□□ -1.27
TUBD1-208ENST00000588009 MINDY4Q4G0A6 757 aa7.1□□□□□ -1.27
TUBD1-208ENST00000588009 FIGNQ5HY92 759 aa7.1□□□□□ -1.27
TUBD1-208ENST00000588009 PRSS36Q5K4E3 855 aa7.1□□□□□ -1.27
TUBD1-208ENST00000588009 MROH9Q5TGP6 573 aa7.1□□□□□ -1.27
TUBD1-208ENST00000588009 CPZQ66K79 652 aa7.1□□□□□ -1.27
TUBD1-208ENST00000588009 NBPF11Q86T75 865 aa7.1□□□□□ -1.27
TUBD1-208ENST00000588009 SLCO6A1Q86UG4 719 aa7.1□□□□□ -1.27
TUBD1-208ENST00000588009 RIOX2Q8IUF8 465 aa7.1□□□□□ -1.27
TUBD1-208ENST00000588009 CMTR2Q8IYT2 770 aaKnown RBP7.1□□□□□ -1.27
TUBD1-208ENST00000588009 NLGN4XQ8N0W4 816 aa7.1□□□□□ -1.27
TUBD1-208ENST00000588009 USP33Q8TEY7 942 aa7.1□□□□□ -1.27
TUBD1-208ENST00000588009 LINC01599Q8WXQ3 324 aa7.1□□□□□ -1.27
TUBD1-208ENST00000588009 SYTL4Q96C24 671 aaPredicted RBP7.1□□□□□ -1.27
TUBD1-208ENST00000588009 SLC39A13Q96H72 371 aa7.1□□□□□ -1.27
TUBD1-208ENST00000588009 HRASLS5Q96KN8 279 aa7.1□□□□□ -1.27
TUBD1-208ENST00000588009 ZMAT4Q9H898 229 aa7.1□□□□□ -1.27
TUBD1-208ENST00000588009 SP110Q9HB58 689 aa7.1□□□□□ -1.27
TUBD1-208ENST00000588009 PIM2Q9P1W9 311 aa7.1□□□□□ -1.27
TUBD1-208ENST00000588009 ZBTB21Q9ULJ3 1066 aa7.1□□□□□ -1.27
TUBD1-208ENST00000588009 CYP17A1P05093 508 aa7.09□□□□□ -1.27
TUBD1-208ENST00000588009 FOSL1P15407 271 aa7.09□□□□□ -1.27
TUBD1-208ENST00000588009 CORO7P57737 925 aa7.09□□□□□ -1.27
TUBD1-208ENST00000588009 GTF2H3Q13889 308 aa7.09□□□□□ -1.27
TUBD1-208ENST00000588009 AOC3Q16853 763 aa7.09□□□□□ -1.27
TUBD1-208ENST00000588009 SYCP2LQ5T4T6 812 aa7.09□□□□□ -1.27
TUBD1-208ENST00000588009 CC2D1AQ6P1N0 951 aaPredicted RBP7.09□□□□□ -1.27
TUBD1-208ENST00000588009 FRMD7Q6ZUT3 714 aa7.09□□□□□ -1.27
TUBD1-208ENST00000588009 AMOTL1Q8IY63 956 aa7.09□□□□□ -1.27
TUBD1-208ENST00000588009 LZTR1Q8N653 840 aa7.09□□□□□ -1.27
TUBD1-208ENST00000588009 UHMK1Q8TAS1 419 aaKnown RBP7.09□□□□□ -1.27
TUBD1-208ENST00000588009 CLIP3Q96DZ5 547 aa7.09□□□□□ -1.27
TUBD1-208ENST00000588009 HSPBAP1Q96EW2 488 aa7.09□□□□□ -1.27
TUBD1-208ENST00000588009 KRTAP4-8Q9BYQ9 185 aa7.09□□□□□ -1.27
TUBD1-208ENST00000588009 CD244Q9BZW8 370 aa7.09□□□□□ -1.27
TUBD1-208ENST00000588009 CHST12Q9NRB3 414 aa7.09□□□□□ -1.27
TUBD1-208ENST00000588009 EBF1Q9UH73 591 aa7.09□□□□□ -1.27
TUBD1-208ENST00000588009 LCHNA4D1U4 455 aa7.08□□□□□ -1.28
TUBD1-208ENST00000588009 KRIT1O00522 736 aa7.08□□□□□ -1.28
TUBD1-208ENST00000588009 XPOTO43592 962 aaKnown RBP7.08□□□□□ -1.28
TUBD1-208ENST00000588009 EIF3JO75822 258 aaKnown RBP7.08□□□□□ -1.28
TUBD1-208ENST00000588009 VCAM1P19320 739 aa7.08□□□□□ -1.28
TUBD1-208ENST00000588009 LPOP22079 712 aaPredicted RBP7.08□□□□□ -1.28
TUBD1-208ENST00000588009 CD40P25942 277 aa7.08□□□□□ -1.28
TUBD1-208ENST00000588009 KIR2DL1P43626 348 aaPredicted RBP7.08□□□□□ -1.28
TUBD1-208ENST00000588009 KIR2DL2P43627 348 aaPredicted RBP7.08□□□□□ -1.28
TUBD1-208ENST00000588009 HTRA3P83110 453 aa7.08□□□□□ -1.28
TUBD1-208ENST00000588009 PRKCQQ04759 706 aa7.08□□□□□ -1.28
TUBD1-208ENST00000588009 SEC23AQ15436 765 aa7.08□□□□□ -1.28
TUBD1-208ENST00000588009 CLUL1Q15846 466 aa7.08□□□□□ -1.28
TUBD1-208ENST00000588009 EFCAB2Q5VUJ9 269 aa7.08□□□□□ -1.28
TUBD1-208ENST00000588009 ESRP1Q6NXG1 681 aaKnown RBP7.08□□□□□ -1.28
TUBD1-208ENST00000588009 EPM2AIP1Q7L775 607 aaPredicted RBP7.08□□□□□ -1.28
TUBD1-208ENST00000588009 ZZZ3Q8IYH5 903 aa7.08□□□□□ -1.28
TUBD1-208ENST00000588009 ASIC4Q96FT7 647 aa7.08□□□□□ -1.28
TUBD1-208ENST00000588009 NUP88Q99567 741 aaPredicted RBP7.08□□□□□ -1.28
TUBD1-208ENST00000588009 ZNF700Q9H0M5 742 aa7.08□□□□□ -1.28
TUBD1-208ENST00000588009 PRDM11Q9NQV5 511 aa7.08□□□□□ -1.28
TUBD1-208ENST00000588009 KCNH7Q9NS40 1196 aa7.08□□□□□ -1.28
TUBD1-208ENST00000588009 VAV3Q9UKW4 847 aa7.08□□□□□ -1.28
TUBD1-208ENST00000588009 ATP23Q9Y6H3 246 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms