RNA–Protein interactions for RNA: ENST00000587888.5

ERCC1-205, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-205ENST00000587888 PKD2L1Q9P0L9 805 aa16.28■□□□□ 0.2
ERCC1-205ENST00000587888 SIP14410 1827 aa16.27■□□□□ 0.2
ERCC1-205ENST00000587888 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.27■□□□□ 0.2
ERCC1-205ENST00000587888 SH2B2O14492 632 aaPredicted RBP16.27■□□□□ 0.2
ERCC1-205ENST00000587888 CHRNA1P02708 482 aa16.27■□□□□ 0.2
ERCC1-205ENST00000587888 MARK3P27448 753 aa16.27■□□□□ 0.2
ERCC1-205ENST00000587888 GPM6BQ13491 265 aa16.27■□□□□ 0.2
ERCC1-205ENST00000587888 UBE2SQ16763 222 aa16.27■□□□□ 0.2
ERCC1-205ENST00000587888 RUFY4Q6ZNE9 571 aa16.27■□□□□ 0.2
ERCC1-205ENST00000587888 SP7Q8TDD2 431 aaPredicted RBP16.27■□□□□ 0.2
ERCC1-205ENST00000587888 TMEM87BQ96K49 555 aa16.27■□□□□ 0.2
ERCC1-205ENST00000587888 LRRC2Q9BYS8 371 aa16.27■□□□□ 0.2
ERCC1-205ENST00000587888 IFIH1Q9BYX4 1025 aaKnown RBP16.27■□□□□ 0.2
ERCC1-205ENST00000587888 NRCAMQ92823 1304 aa16.26■□□□□ 0.19
ERCC1-205ENST00000587888 GSTTP1A0A1W2PQM5 241 aa16.26■□□□□ 0.19
ERCC1-205ENST00000587888 SLC27A2O14975 620 aa16.26■□□□□ 0.19
ERCC1-205ENST00000587888 CALM1P0DP23 149 aa16.26■□□□□ 0.19
ERCC1-205ENST00000587888 CALM2P0DP24 149 aa16.26■□□□□ 0.19
ERCC1-205ENST00000587888 CALM3P0DP25 149 aa16.26■□□□□ 0.19
ERCC1-205ENST00000587888 ITGB5P18084 799 aa16.26■□□□□ 0.19
ERCC1-205ENST00000587888 KCNA5P22460 613 aa16.26■□□□□ 0.19
ERCC1-205ENST00000587888 PTPROQ16827 1216 aa16.26■□□□□ 0.19
ERCC1-205ENST00000587888 FAM26DQ5JW98 314 aa16.26■□□□□ 0.19
ERCC1-205ENST00000587888 TMEM192Q8IY95 271 aa16.26■□□□□ 0.19
ERCC1-205ENST00000587888 SEPT1Q8WYJ6 367 aa16.26■□□□□ 0.19
ERCC1-205ENST00000587888 APBB2Q92870 758 aa16.26■□□□□ 0.19
ERCC1-205ENST00000587888 GLG1Q92896 1179 aa16.26■□□□□ 0.19
ERCC1-205ENST00000587888 GPRASP2Q96D09 838 aa16.26■□□□□ 0.19
ERCC1-205ENST00000587888 MTA3Q9BTC8 594 aa16.26■□□□□ 0.19
ERCC1-205ENST00000587888 LSG1Q9H089 658 aaKnown RBP16.26■□□□□ 0.19
ERCC1-205ENST00000587888 MICAL3Q7RTP6 2002 aa16.26■□□□□ 0.19
ERCC1-205ENST00000587888 TRANK1O15050 2925 aa16.25■□□□□ 0.19
ERCC1-205ENST00000587888 GHRP10912 638 aa16.25■□□□□ 0.19
ERCC1-205ENST00000587888 KCNA2P16389 499 aa16.25■□□□□ 0.19
ERCC1-205ENST00000587888 MTMR1Q13613 665 aa16.25■□□□□ 0.19
ERCC1-205ENST00000587888 EP400NLQ6ZTU2 488 aa16.25■□□□□ 0.19
ERCC1-205ENST00000587888 FANCBQ8NB91 859 aa16.25■□□□□ 0.19
ERCC1-205ENST00000587888 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.25■□□□□ 0.19
ERCC1-205ENST00000587888 KHSRPQ92945 711 aaKnown RBP eCLIP16.25■□□□□ 0.19
ERCC1-205ENST00000587888 MRPL38Q96DV4 380 aaKnown RBP16.25■□□□□ 0.19
ERCC1-205ENST00000587888 IL17RAQ96F46 866 aa16.25■□□□□ 0.19
ERCC1-205ENST00000587888 CDHR1Q96JP9 859 aa16.25■□□□□ 0.19
ERCC1-205ENST00000587888 SAMD11Q96NU1 681 aa16.25■□□□□ 0.19
ERCC1-205ENST00000587888 CD320Q9NPF0 282 aa16.25■□□□□ 0.19
ERCC1-205ENST00000587888 PCDHA6Q9UN73 950 aa16.25■□□□□ 0.19
ERCC1-205ENST00000587888 PCDHA8Q9Y5H6 950 aa16.25■□□□□ 0.19
ERCC1-205ENST00000587888 SLC12A7Q9Y666 1083 aa16.25■□□□□ 0.19
ERCC1-205ENST00000587888 SPDYE3A6NKU9 549 aa16.24■□□□□ 0.19
ERCC1-205ENST00000587888 H3BNC9 293 aa16.24■□□□□ 0.19
ERCC1-205ENST00000587888 LIFRP42702 1097 aa16.24■□□□□ 0.19
ERCC1-205ENST00000587888 IGBP1P78318 339 aa16.24■□□□□ 0.19
ERCC1-205ENST00000587888 PPFIA1Q13136 1202 aa16.24■□□□□ 0.19
ERCC1-205ENST00000587888 GRIK4Q16099 956 aa16.24■□□□□ 0.19
ERCC1-205ENST00000587888 LEXMQ3ZCV2 418 aa16.24■□□□□ 0.19
ERCC1-205ENST00000587888 CREB3L3Q68CJ9 461 aa16.24■□□□□ 0.19
ERCC1-205ENST00000587888 HEATR3Q7Z4Q2 680 aa16.24■□□□□ 0.19
ERCC1-205ENST00000587888 RSPH3Q86UC2 560 aa16.24■□□□□ 0.19
ERCC1-205ENST00000587888 BANK1Q8NDB2 785 aa16.24■□□□□ 0.19
ERCC1-205ENST00000587888 DNAJB3Q8WWF6 145 aa16.24■□□□□ 0.19
ERCC1-205ENST00000587888 LRFN3Q9BTN0 628 aa16.24■□□□□ 0.19
ERCC1-205ENST00000587888 ERAP1Q9NZ08 941 aa16.24■□□□□ 0.19
ERCC1-205ENST00000587888 UBIAD1Q9Y5Z9 338 aa16.24■□□□□ 0.19
ERCC1-205ENST00000587888 KAT6AQ92794 2004 aa16.23■□□□□ 0.19
ERCC1-205ENST00000587888 LPIN1Q14693 890 aa16.23■□□□□ 0.19
ERCC1-205ENST00000587888 TAF2Q6P1X5 1199 aa16.23■□□□□ 0.19
ERCC1-205ENST00000587888 FIBCD1Q8N539 461 aa16.23■□□□□ 0.19
ERCC1-205ENST00000587888 ZBTB10Q96DT7 871 aa16.23■□□□□ 0.19
ERCC1-205ENST00000587888 ESYT1Q9BSJ8 1104 aa16.23■□□□□ 0.19
ERCC1-205ENST00000587888 SMARCAD1Q9H4L7 1026 aa16.23■□□□□ 0.19
ERCC1-205ENST00000587888 ANO2Q9NQ90 1003 aa16.23■□□□□ 0.19
ERCC1-205ENST00000587888 JADE2Q9NQC1 790 aa16.23■□□□□ 0.19
ERCC1-205ENST00000587888 ENPP3O14638 875 aa16.22■□□□□ 0.19
ERCC1-205ENST00000587888 NECTIN1Q15223 517 aa16.22■□□□□ 0.19
ERCC1-205ENST00000587888 TCEAL5Q5H9L2 206 aa16.22■□□□□ 0.19
ERCC1-205ENST00000587888 TMEM31Q5JXX7 168 aa16.22■□□□□ 0.19
ERCC1-205ENST00000587888 MARCH8Q5T0T0 291 aa16.22■□□□□ 0.19
ERCC1-205ENST00000587888 PTCRAQ6ISU1 281 aaPredicted RBP16.22■□□□□ 0.19
ERCC1-205ENST00000587888 SYNE3Q6ZMZ3 975 aa16.22■□□□□ 0.19
ERCC1-205ENST00000587888 TMTC3Q6ZXV5 915 aa16.22■□□□□ 0.19
ERCC1-205ENST00000587888 MICU3Q86XE3 530 aa16.22■□□□□ 0.19
ERCC1-205ENST00000587888 FAM49AQ9H0Q0 323 aaPredicted RBP16.22■□□□□ 0.19
ERCC1-205ENST00000587888 EHMT1Q9H9B1 1298 aa16.22■□□□□ 0.19
ERCC1-205ENST00000587888 TUBE1Q9UJT0 475 aa16.22■□□□□ 0.19
ERCC1-205ENST00000587888 CDY2AQ9Y6F7 541 aa16.22■□□□□ 0.19
ERCC1-205ENST00000587888 FAM86C2PA6NEL3 165 aa16.21■□□□□ 0.19
ERCC1-205ENST00000587888 H3BQ06 376 aaPredicted RBP16.21■□□□□ 0.19
ERCC1-205ENST00000587888 MAFGO15525 162 aa16.21■□□□□ 0.19
ERCC1-205ENST00000587888 IL9P15248 144 aa16.21■□□□□ 0.19
ERCC1-205ENST00000587888 SSTR3P32745 418 aaPredicted RBP16.21■□□□□ 0.19
ERCC1-205ENST00000587888 CTNNB1P35222 781 aa16.21■□□□□ 0.19
ERCC1-205ENST00000587888 MGAT3Q09327 533 aa16.21■□□□□ 0.19
ERCC1-205ENST00000587888 TIGD5Q53EQ6 642 aa16.21■□□□□ 0.19
ERCC1-205ENST00000587888 RPAINQ86UA6 219 aa16.21■□□□□ 0.19
ERCC1-205ENST00000587888 FAM178BQ8IXR5 827 aa16.21■□□□□ 0.19
ERCC1-205ENST00000587888 FAM122AQ96E09 287 aa16.21■□□□□ 0.19
ERCC1-205ENST00000587888 MBLAC1A4D2B0 266 aaPredicted RBP16.2■□□□□ 0.18
ERCC1-205ENST00000587888 RRN3P2A6NIE6 340 aa16.2■□□□□ 0.18
ERCC1-205ENST00000587888 CSPG5O95196 566 aa16.2■□□□□ 0.18
ERCC1-205ENST00000587888 INSRRP14616 1297 aa16.2■□□□□ 0.18
ERCC1-205ENST00000587888 BMPR1AP36894 532 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms