RNA–Protein interactions for RNA: ENST00000587629.5

SDF2-205, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 775 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-205ENST00000587629 SEMA3FQ13275 785 aa7.4□□□□□ -1.22
SDF2-205ENST00000587629 GNPTABQ3T906 1256 aa7.4□□□□□ -1.22
SDF2-205ENST00000587629 PLEKHG4Q58EX7 1191 aa7.4□□□□□ -1.22
SDF2-205ENST00000587629 NFXL1Q6ZNB6 911 aa7.4□□□□□ -1.22
SDF2-205ENST00000587629 EP400NLQ6ZTU2 488 aa7.4□□□□□ -1.22
SDF2-205ENST00000587629 ZNF654Q8IZM8 581 aa7.4□□□□□ -1.22
SDF2-205ENST00000587629 SAMD3Q8N6K7 520 aa7.4□□□□□ -1.22
SDF2-205ENST00000587629 SMARCC2Q8TAQ2 1214 aa7.4□□□□□ -1.22
SDF2-205ENST00000587629 IGDCC4Q8TDY8 1250 aa7.4□□□□□ -1.22
SDF2-205ENST00000587629 KHSRPQ92945 711 aaKnown RBP eCLIP7.4□□□□□ -1.22
SDF2-205ENST00000587629 CUL5Q93034 780 aa7.4□□□□□ -1.22
SDF2-205ENST00000587629 RRP36Q96EU6 259 aaKnown RBP7.4□□□□□ -1.22
SDF2-205ENST00000587629 YME1L1Q96TA2 773 aa7.4□□□□□ -1.22
SDF2-205ENST00000587629 GPR20Q99678 358 aa7.4□□□□□ -1.22
SDF2-205ENST00000587629 USP26Q9BXU7 913 aa7.4□□□□□ -1.22
SDF2-205ENST00000587629 CD320Q9NPF0 282 aa7.4□□□□□ -1.22
SDF2-205ENST00000587629 PKD2L1Q9P0L9 805 aa7.4□□□□□ -1.22
SDF2-205ENST00000587629 EMSYQ7Z589 1322 aa7.4□□□□□ -1.22
SDF2-205ENST00000587629 BAZ2BQ9UIF8 2168 aaKnown RBP7.39□□□□□ -1.23
SDF2-205ENST00000587629 COL4A4P53420 1690 aaPredicted RBP7.39□□□□□ -1.23
SDF2-205ENST00000587629 MEIS2O14770 477 aa7.39□□□□□ -1.23
SDF2-205ENST00000587629 SGSM2O43147 1006 aa7.39□□□□□ -1.23
SDF2-205ENST00000587629 FIBPO43427 364 aa7.39□□□□□ -1.23
SDF2-205ENST00000587629 PRC1O43663 620 aa7.39□□□□□ -1.23
SDF2-205ENST00000587629 CSPG5O95196 566 aa7.39□□□□□ -1.23
SDF2-205ENST00000587629 GNAT1P11488 350 aa7.39□□□□□ -1.23
SDF2-205ENST00000587629 MARK3P27448 753 aa7.39□□□□□ -1.23
SDF2-205ENST00000587629 ICAM3P32942 547 aa7.39□□□□□ -1.23
SDF2-205ENST00000587629 COL9A3Q14050 684 aaPredicted RBP7.39□□□□□ -1.23
SDF2-205ENST00000587629 NEDD9Q14511 834 aa7.39□□□□□ -1.23
SDF2-205ENST00000587629 EPC2Q52LR7 807 aa7.39□□□□□ -1.23
SDF2-205ENST00000587629 METTL7BQ6UX53 244 aa7.39□□□□□ -1.23
SDF2-205ENST00000587629 RUFY4Q6ZNE9 571 aa7.39□□□□□ -1.23
SDF2-205ENST00000587629 MB21D2Q8IYB1 491 aaPredicted RBP7.39□□□□□ -1.23
SDF2-205ENST00000587629 CCDC82Q8N4S0 544 aa7.39□□□□□ -1.23
SDF2-205ENST00000587629 SRBD1Q8N5C6 995 aaKnown RBP7.39□□□□□ -1.23
SDF2-205ENST00000587629 CTCFLQ8NI51 663 aaPredicted RBP7.39□□□□□ -1.23
SDF2-205ENST00000587629 LMBR1Q8WVP7 490 aa7.39□□□□□ -1.23
SDF2-205ENST00000587629 SEPT8Q92599 483 aa7.39□□□□□ -1.23
SDF2-205ENST00000587629 ZBTB10Q96DT7 871 aa7.39□□□□□ -1.23
SDF2-205ENST00000587629 INPP4AQ96PE3 977 aaPredicted RBP7.39□□□□□ -1.23
SDF2-205ENST00000587629 C1QTNF1Q9BXJ1 281 aa7.39□□□□□ -1.23
SDF2-205ENST00000587629 KRTAP3-3Q9BYR6 98 aa7.39□□□□□ -1.23
SDF2-205ENST00000587629 KRTAP3-2Q9BYR7 98 aa7.39□□□□□ -1.23
SDF2-205ENST00000587629 IFIH1Q9BYX4 1025 aaKnown RBP7.39□□□□□ -1.23
SDF2-205ENST00000587629 UBE2ZQ9H832 354 aaPredicted RBP7.39□□□□□ -1.23
SDF2-205ENST00000587629 LY9Q9HBG7 655 aa7.39□□□□□ -1.23
SDF2-205ENST00000587629 LMCD1Q9NZU5 365 aa7.39□□□□□ -1.23
SDF2-205ENST00000587629 SEC63Q9UGP8 760 aaKnown RBP7.39□□□□□ -1.23
SDF2-205ENST00000587629 ZNF215Q9UL58 517 aaPredicted RBP7.39□□□□□ -1.23
SDF2-205ENST00000587629 RBM8AQ9Y5S9 174 aaKnown RBP7.39□□□□□ -1.23
SDF2-205ENST00000587629 FRMPD4Q14CM0 1322 aa7.38□□□□□ -1.23
SDF2-205ENST00000587629 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.38□□□□□ -1.23
SDF2-205ENST00000587629 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.38□□□□□ -1.23
SDF2-205ENST00000587629 FAM205CA6NFA0 338 aa7.38□□□□□ -1.23
SDF2-205ENST00000587629 CCDC69A6NI79 296 aa7.38□□□□□ -1.23
SDF2-205ENST00000587629 H3BQ06 376 aaPredicted RBP7.38□□□□□ -1.23
SDF2-205ENST00000587629 ATP9AO75110 1047 aa7.38□□□□□ -1.23
SDF2-205ENST00000587629 STAM2O75886 525 aa7.38□□□□□ -1.23
SDF2-205ENST00000587629 CHRNA1P02708 482 aa7.38□□□□□ -1.23
SDF2-205ENST00000587629 HOXC8P31273 242 aa7.38□□□□□ -1.23
SDF2-205ENST00000587629 KIF5BP33176 963 aa7.38□□□□□ -1.23
SDF2-205ENST00000587629 TCF7P36402 384 aaPredicted RBP7.38□□□□□ -1.23
SDF2-205ENST00000587629 IGBP1P78318 339 aa7.38□□□□□ -1.23
SDF2-205ENST00000587629 HTRA4P83105 476 aaPredicted RBP7.38□□□□□ -1.23
SDF2-205ENST00000587629 GPM6BQ13491 265 aa7.38□□□□□ -1.23
SDF2-205ENST00000587629 UBE2SQ16763 222 aa7.38□□□□□ -1.23
SDF2-205ENST00000587629 PCNX4Q63HM2 1172 aa7.38□□□□□ -1.23
SDF2-205ENST00000587629 CASC1Q6TDU7 716 aa7.38□□□□□ -1.23
SDF2-205ENST00000587629 NLRX1Q86UT6 975 aa7.38□□□□□ -1.23
SDF2-205ENST00000587629 TMEM192Q8IY95 271 aa7.38□□□□□ -1.23
SDF2-205ENST00000587629 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.38□□□□□ -1.23
SDF2-205ENST00000587629 MAP4K1Q92918 833 aa7.38□□□□□ -1.23
SDF2-205ENST00000587629 TOP1MTQ969P6 601 aa7.38□□□□□ -1.23
SDF2-205ENST00000587629 FAM122AQ96E09 287 aa7.38□□□□□ -1.23
SDF2-205ENST00000587629 LRFN3Q9BTN0 628 aa7.38□□□□□ -1.23
SDF2-205ENST00000587629 LRRC2Q9BYS8 371 aa7.38□□□□□ -1.23
SDF2-205ENST00000587629 PSTPIP2Q9H939 334 aa7.38□□□□□ -1.23
SDF2-205ENST00000587629 NRCAMQ92823 1304 aa7.37□□□□□ -1.23
SDF2-205ENST00000587629 GSTTP1A0A1W2PQM5 241 aa7.37□□□□□ -1.23
SDF2-205ENST00000587629 POTEB3A0JP26 581 aa7.37□□□□□ -1.23
SDF2-205ENST00000587629 H3BNC9 293 aa7.37□□□□□ -1.23
SDF2-205ENST00000587629 PIK3CDO00329 1044 aa7.37□□□□□ -1.23
SDF2-205ENST00000587629 SH2B2O14492 632 aaPredicted RBP7.37□□□□□ -1.23
SDF2-205ENST00000587629 DDAH1O94760 285 aa7.37□□□□□ -1.23
SDF2-205ENST00000587629 GHRP10912 638 aa7.37□□□□□ -1.23
SDF2-205ENST00000587629 IL9P15248 144 aa7.37□□□□□ -1.23
SDF2-205ENST00000587629 ITGB5P18084 799 aa7.37□□□□□ -1.23
SDF2-205ENST00000587629 IBSPP21815 317 aaPredicted RBP7.37□□□□□ -1.23
SDF2-205ENST00000587629 SSTR3P32745 418 aaPredicted RBP7.37□□□□□ -1.23
SDF2-205ENST00000587629 MCM5P33992 734 aa7.37□□□□□ -1.23
SDF2-205ENST00000587629 ADAM17P78536 824 aa7.37□□□□□ -1.23
SDF2-205ENST00000587629 TMEM62Q0P6H9 643 aa7.37□□□□□ -1.23
SDF2-205ENST00000587629 PPFIA1Q13136 1202 aa7.37□□□□□ -1.23
SDF2-205ENST00000587629 GRIK4Q16099 956 aa7.37□□□□□ -1.23
SDF2-205ENST00000587629 PTPROQ16827 1216 aa7.37□□□□□ -1.23
SDF2-205ENST00000587629 TCEAL5Q5H9L2 206 aa7.37□□□□□ -1.23
SDF2-205ENST00000587629 TMEM31Q5JXX7 168 aa7.37□□□□□ -1.23
SDF2-205ENST00000587629 PTCRAQ6ISU1 281 aaPredicted RBP7.37□□□□□ -1.23
SDF2-205ENST00000587629 POTEBQ6S5H4 581 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 110.3 ms