RNA–Protein interactions for RNA: ENST00000586863.5

ATG4D-206, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 4

Gene ATG4D, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-206ENST00000586863 TMTC3Q6ZXV5 915 aa16.1■□□□□ 0.17
ATG4D-206ENST00000586863 NLRX1Q86UT6 975 aa16.1■□□□□ 0.17
ATG4D-206ENST00000586863 MICU3Q86XE3 530 aa16.1■□□□□ 0.17
ATG4D-206ENST00000586863 TMTC2Q8N394 836 aa16.1■□□□□ 0.17
ATG4D-206ENST00000586863 CCDC82Q8N4S0 544 aa16.1■□□□□ 0.17
ATG4D-206ENST00000586863 PSTPIP2Q9H939 334 aa16.1■□□□□ 0.17
ATG4D-206ENST00000586863 ANO2Q9NQ90 1003 aa16.1■□□□□ 0.17
ATG4D-206ENST00000586863 COG5Q9UP83 839 aa16.1■□□□□ 0.17
ATG4D-206ENST00000586863 SLC12A7Q9Y666 1083 aa16.1■□□□□ 0.17
ATG4D-206ENST00000586863 CALM1P0DP23 149 aa16.09■□□□□ 0.17
ATG4D-206ENST00000586863 CALM2P0DP24 149 aa16.09■□□□□ 0.17
ATG4D-206ENST00000586863 CALM3P0DP25 149 aa16.09■□□□□ 0.17
ATG4D-206ENST00000586863 GNAT1P11488 350 aa16.09■□□□□ 0.17
ATG4D-206ENST00000586863 TCF7P36402 384 aaPredicted RBP16.09■□□□□ 0.17
ATG4D-206ENST00000586863 HTRA4P83105 476 aaPredicted RBP16.09■□□□□ 0.17
ATG4D-206ENST00000586863 SEPT8Q92599 483 aa16.09■□□□□ 0.17
ATG4D-206ENST00000586863 HLA-CQ95604 372 aa16.09■□□□□ 0.17
ATG4D-206ENST00000586863 GPRASP2Q96D09 838 aa16.09■□□□□ 0.17
ATG4D-206ENST00000586863 C17orf80Q9BSJ5 609 aa16.09■□□□□ 0.17
ATG4D-206ENST00000586863 PKD2L1Q9P0L9 805 aa16.09■□□□□ 0.17
ATG4D-206ENST00000586863 INSL6Q9Y581 213 aa16.09■□□□□ 0.17
ATG4D-206ENST00000586863 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.08■□□□□ 0.16
ATG4D-206ENST00000586863 RUFY4Q6ZNE9 571 aa16.08■□□□□ 0.16
ATG4D-206ENST00000586863 HEATR3Q7Z4Q2 680 aa16.08■□□□□ 0.16
ATG4D-206ENST00000586863 SGMS1Q86VZ5 419 aa16.08■□□□□ 0.16
ATG4D-206ENST00000586863 FANCBQ8NB91 859 aa16.08■□□□□ 0.16
ATG4D-206ENST00000586863 GIMAP8Q8ND71 665 aaPredicted RBP16.08■□□□□ 0.16
ATG4D-206ENST00000586863 SP7Q8TDD2 431 aaPredicted RBP16.08■□□□□ 0.16
ATG4D-206ENST00000586863 LMCD1Q9NZU5 365 aa16.08■□□□□ 0.16
ATG4D-206ENST00000586863 UBIAD1Q9Y5Z9 338 aa16.08■□□□□ 0.16
ATG4D-206ENST00000586863 CNTNAP5Q8WYK1 1306 aa16.08■□□□□ 0.16
ATG4D-206ENST00000586863 ATG2AQ2TAZ0 1938 aa16.07■□□□□ 0.16
ATG4D-206ENST00000586863 LOXHD1Q8IVV2 1947 aa16.07■□□□□ 0.16
ATG4D-206ENST00000586863 GSTTP1A0A1W2PQM5 241 aa16.07■□□□□ 0.16
ATG4D-206ENST00000586863 MARK3P27448 753 aa16.07■□□□□ 0.16
ATG4D-206ENST00000586863 FAM26DQ5JW98 314 aa16.07■□□□□ 0.16
ATG4D-206ENST00000586863 CDHR1Q96JP9 859 aa16.07■□□□□ 0.16
ATG4D-206ENST00000586863 PCDHA6Q9UN73 950 aa16.07■□□□□ 0.16
ATG4D-206ENST00000586863 PCDHA8Q9Y5H6 950 aa16.07■□□□□ 0.16
ATG4D-206ENST00000586863 NRCAMQ92823 1304 aa16.07■□□□□ 0.16
ATG4D-206ENST00000586863 COL4A6Q14031 1691 aa16.07■□□□□ 0.16
ATG4D-206ENST00000586863 RALGAPA2Q2PPJ7 1873 aa16.07■□□□□ 0.16
ATG4D-206ENST00000586863 TTC3P53804 2025 aa16.07■□□□□ 0.16
ATG4D-206ENST00000586863 SPDYE3A6NKU9 549 aa16.06■□□□□ 0.16
ATG4D-206ENST00000586863 UPP2O95045 317 aa16.06■□□□□ 0.16
ATG4D-206ENST00000586863 CHRNA1P02708 482 aa16.06■□□□□ 0.16
ATG4D-206ENST00000586863 PPFIA1Q13136 1202 aa16.06■□□□□ 0.16
ATG4D-206ENST00000586863 MTMR1Q13613 665 aa16.06■□□□□ 0.16
ATG4D-206ENST00000586863 WWC2Q6AWC2 1192 aa16.06■□□□□ 0.16
ATG4D-206ENST00000586863 TYW1BQ6NUM6 668 aa16.06■□□□□ 0.16
ATG4D-206ENST00000586863 FBXO22Q8NEZ5 403 aa16.06■□□□□ 0.16
ATG4D-206ENST00000586863 SEPT1Q8WYJ6 367 aa16.06■□□□□ 0.16
ATG4D-206ENST00000586863 TOP1MTQ969P6 601 aa16.06■□□□□ 0.16
ATG4D-206ENST00000586863 TCEANC2Q96MN5 208 aa16.06■□□□□ 0.16
ATG4D-206ENST00000586863 YME1L1Q96TA2 773 aa16.06■□□□□ 0.16
ATG4D-206ENST00000586863 IFIH1Q9BYX4 1025 aaKnown RBP16.06■□□□□ 0.16
ATG4D-206ENST00000586863 CENPBP07199 599 aaPredicted RBP16.05■□□□□ 0.16
ATG4D-206ENST00000586863 GHRP10912 638 aa16.05■□□□□ 0.16
ATG4D-206ENST00000586863 COL9A1P20849 921 aa16.05■□□□□ 0.16
ATG4D-206ENST00000586863 MGAT3Q09327 533 aa16.05■□□□□ 0.16
ATG4D-206ENST00000586863 GRIK4Q16099 956 aa16.05■□□□□ 0.16
ATG4D-206ENST00000586863 BMP2KLQ5H9B9 411 aa16.05■□□□□ 0.16
ATG4D-206ENST00000586863 APOA5Q6Q788 366 aa16.05■□□□□ 0.16
ATG4D-206ENST00000586863 RPAINQ86UA6 219 aa16.05■□□□□ 0.16
ATG4D-206ENST00000586863 APBB2Q92870 758 aa16.05■□□□□ 0.16
ATG4D-206ENST00000586863 JADE2Q9NQC1 790 aa16.05■□□□□ 0.16
ATG4D-206ENST00000586863 ERAP1Q9NZ08 941 aa16.05■□□□□ 0.16
ATG4D-206ENST00000586863 RAPGEFL1Q9UHV5 662 aa16.05■□□□□ 0.16
ATG4D-206ENST00000586863 C5orf42Q9H799 3197 aa16.04■□□□□ 0.16
ATG4D-206ENST00000586863 FUT2Q10981 343 aa16.04■□□□□ 0.16
ATG4D-206ENST00000586863 EPC2Q52LR7 807 aa16.04■□□□□ 0.16
ATG4D-206ENST00000586863 TAF2Q6P1X5 1199 aa16.04■□□□□ 0.16
ATG4D-206ENST00000586863 RASEFQ8IZ41 740 aa16.04■□□□□ 0.16
ATG4D-206ENST00000586863 CYP2W1Q8TAV3 490 aa16.04■□□□□ 0.16
ATG4D-206ENST00000586863 GLG1Q92896 1179 aa16.04■□□□□ 0.16
ATG4D-206ENST00000586863 ZBTB10Q96DT7 871 aa16.04■□□□□ 0.16
ATG4D-206ENST00000586863 PGBD1Q96JS3 809 aa16.04■□□□□ 0.16
ATG4D-206ENST00000586863 NEK1Q96PY6 1258 aa16.04■□□□□ 0.16
ATG4D-206ENST00000586863 PCYT2Q99447 389 aa16.04■□□□□ 0.16
ATG4D-206ENST00000586863 JPH1Q9HDC5 661 aaPredicted RBP16.04■□□□□ 0.16
ATG4D-206ENST00000586863 TUBE1Q9UJT0 475 aa16.04■□□□□ 0.16
ATG4D-206ENST00000586863 BRPF3Q9ULD4 1205 aa16.04■□□□□ 0.16
ATG4D-206ENST00000586863 MBLAC1A4D2B0 266 aaPredicted RBP16.03■□□□□ 0.16
ATG4D-206ENST00000586863 NAPAP54920 295 aa16.03■□□□□ 0.16
ATG4D-206ENST00000586863 EXOSC10Q01780 885 aaKnown RBP16.03■□□□□ 0.16
ATG4D-206ENST00000586863 LPIN1Q14693 890 aa16.03■□□□□ 0.16
ATG4D-206ENST00000586863 RTN1Q16799 776 aa16.03■□□□□ 0.16
ATG4D-206ENST00000586863 ADCK5Q3MIX3 580 aa16.03■□□□□ 0.16
ATG4D-206ENST00000586863 MARCH8Q5T0T0 291 aa16.03■□□□□ 0.16
ATG4D-206ENST00000586863 RNF20Q5VTR2 975 aa16.03■□□□□ 0.16
ATG4D-206ENST00000586863 SYNE3Q6ZMZ3 975 aa16.03■□□□□ 0.16
ATG4D-206ENST00000586863 DNAJB3Q8WWF6 145 aa16.03■□□□□ 0.16
ATG4D-206ENST00000586863 SMARCAD1Q9H4L7 1026 aa16.03■□□□□ 0.16
ATG4D-206ENST00000586863 UBE2ZQ9H832 354 aaPredicted RBP16.03■□□□□ 0.16
ATG4D-206ENST00000586863 EHMT1Q9H9B1 1298 aa16.03■□□□□ 0.16
ATG4D-206ENST00000586863 KCNH7Q9NS40 1196 aa16.03■□□□□ 0.16
ATG4D-206ENST00000586863 RBM28Q9NW13 759 aaKnown RBP16.03■□□□□ 0.16
ATG4D-206ENST00000586863 MAFGO15525 162 aa16.02■□□□□ 0.16
ATG4D-206ENST00000586863 ZBTB43O43298 467 aa16.02■□□□□ 0.16
ATG4D-206ENST00000586863 IGBP1P78318 339 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms