RNA–Protein interactions for RNA: ENST00000586119.1

LIG3-207, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-207ENST00000586119 GSTTP1A0A1W2PQM5 241 aa13.4□□□□□ -0.26
LIG3-207ENST00000586119 PI4K2BG5E9Z4 385 aa13.4□□□□□ -0.26
LIG3-207ENST00000586119 H3BNC9 293 aa13.4□□□□□ -0.26
LIG3-207ENST00000586119 FIBPO43427 364 aa13.4□□□□□ -0.26
LIG3-207ENST00000586119 MARK3P27448 753 aa13.4□□□□□ -0.26
LIG3-207ENST00000586119 UBE2SQ16763 222 aa13.4□□□□□ -0.26
LIG3-207ENST00000586119 GNPTABQ3T906 1256 aa13.4□□□□□ -0.26
LIG3-207ENST00000586119 FAM26DQ5JW98 314 aa13.4□□□□□ -0.26
LIG3-207ENST00000586119 TMEM31Q5JXX7 168 aa13.4□□□□□ -0.26
LIG3-207ENST00000586119 PTCRAQ6ISU1 281 aaPredicted RBP13.4□□□□□ -0.26
LIG3-207ENST00000586119 EP400NLQ6ZTU2 488 aa13.4□□□□□ -0.26
LIG3-207ENST00000586119 ZNF654Q8IZM8 581 aa13.4□□□□□ -0.26
LIG3-207ENST00000586119 MRPL38Q96DV4 380 aaKnown RBP13.4□□□□□ -0.26
LIG3-207ENST00000586119 RBM8AQ9Y5S9 174 aaKnown RBP13.4□□□□□ -0.26
LIG3-207ENST00000586119 GRXCR2A6NFK2 248 aa13.39□□□□□ -0.27
LIG3-207ENST00000586119 CSPG5O95196 566 aa13.39□□□□□ -0.27
LIG3-207ENST00000586119 LINC00271P0C7V0 271 aa13.39□□□□□ -0.27
LIG3-207ENST00000586119 GHRP10912 638 aa13.39□□□□□ -0.27
LIG3-207ENST00000586119 KCNA2P16389 499 aa13.39□□□□□ -0.27
LIG3-207ENST00000586119 ITGB5P18084 799 aa13.39□□□□□ -0.27
LIG3-207ENST00000586119 TCF7P36402 384 aaPredicted RBP13.39□□□□□ -0.27
LIG3-207ENST00000586119 MGAT3Q09327 533 aa13.39□□□□□ -0.27
LIG3-207ENST00000586119 TRAF1Q13077 416 aa13.39□□□□□ -0.27
LIG3-207ENST00000586119 PCNX4Q63HM2 1172 aa13.39□□□□□ -0.27
LIG3-207ENST00000586119 GJD3Q8N144 294 aa13.39□□□□□ -0.27
LIG3-207ENST00000586119 CCDC82Q8N4S0 544 aa13.39□□□□□ -0.27
LIG3-207ENST00000586119 BANK1Q8NDB2 785 aa13.39□□□□□ -0.27
LIG3-207ENST00000586119 RUFY2Q8WXA3 655 aa13.39□□□□□ -0.27
LIG3-207ENST00000586119 RRP36Q96EU6 259 aaKnown RBP13.39□□□□□ -0.27
LIG3-207ENST00000586119 LRRC2Q9BYS8 371 aa13.39□□□□□ -0.27
LIG3-207ENST00000586119 IFIH1Q9BYX4 1025 aaKnown RBP13.39□□□□□ -0.27
LIG3-207ENST00000586119 TTC3P53804 2025 aa13.39□□□□□ -0.27
LIG3-207ENST00000586119 PIK3CDO00329 1044 aa13.38□□□□□ -0.27
LIG3-207ENST00000586119 ENPP3O14638 875 aa13.38□□□□□ -0.27
LIG3-207ENST00000586119 GRM6O15303 877 aa13.38□□□□□ -0.27
LIG3-207ENST00000586119 PRC1O43663 620 aa13.38□□□□□ -0.27
LIG3-207ENST00000586119 GPR37L1O60883 481 aa13.38□□□□□ -0.27
LIG3-207ENST00000586119 STAM2O75886 525 aa13.38□□□□□ -0.27
LIG3-207ENST00000586119 GNAT1P11488 350 aa13.38□□□□□ -0.27
LIG3-207ENST00000586119 LPIN1Q14693 890 aa13.38□□□□□ -0.27
LIG3-207ENST00000586119 SART3Q15020 963 aaKnown RBP13.38□□□□□ -0.27
LIG3-207ENST00000586119 MARCH8Q5T0T0 291 aa13.38□□□□□ -0.27
LIG3-207ENST00000586119 RTN4RL1Q86UN2 441 aaPredicted RBP13.38□□□□□ -0.27
LIG3-207ENST00000586119 NLRX1Q86UT6 975 aa13.38□□□□□ -0.27
LIG3-207ENST00000586119 CTCFLQ8NI51 663 aaPredicted RBP13.38□□□□□ -0.27
LIG3-207ENST00000586119 NEK9Q8TD19 979 aa13.38□□□□□ -0.27
LIG3-207ENST00000586119 DNAJB3Q8WWF6 145 aa13.38□□□□□ -0.27
LIG3-207ENST00000586119 SENP7Q9BQF6 1050 aa13.38□□□□□ -0.27
LIG3-207ENST00000586119 SPZ1Q9BXG8 430 aa13.38□□□□□ -0.27
LIG3-207ENST00000586119 EHMT1Q9H9B1 1298 aa13.38□□□□□ -0.27
LIG3-207ENST00000586119 SH2B2O14492 632 aaPredicted RBP13.37□□□□□ -0.27
LIG3-207ENST00000586119 CAND2O75155 1236 aa13.37□□□□□ -0.27
LIG3-207ENST00000586119 SSTR3P32745 418 aaPredicted RBP13.37□□□□□ -0.27
LIG3-207ENST00000586119 GTF2F1P35269 517 aaKnown RBP eCLIP13.37□□□□□ -0.27
LIG3-207ENST00000586119 LTBRP36941 435 aa13.37□□□□□ -0.27
LIG3-207ENST00000586119 IGBP1P78318 339 aa13.37□□□□□ -0.27
LIG3-207ENST00000586119 DLX2Q07687 328 aaPredicted RBP13.37□□□□□ -0.27
LIG3-207ENST00000586119 ERICH6BQ5W0A0 696 aa13.37□□□□□ -0.27
LIG3-207ENST00000586119 CYP2W1Q8TAV3 490 aa13.37□□□□□ -0.27
LIG3-207ENST00000586119 SEPT1Q8WYJ6 367 aa13.37□□□□□ -0.27
LIG3-207ENST00000586119 CUL5Q93034 780 aa13.37□□□□□ -0.27
LIG3-207ENST00000586119 IL17RAQ96F46 866 aa13.37□□□□□ -0.27
LIG3-207ENST00000586119 PCYT2Q99447 389 aa13.37□□□□□ -0.27
LIG3-207ENST00000586119 AGO3Q9H9G7 860 aaKnown RBP13.37□□□□□ -0.27
LIG3-207ENST00000586119 ZNF215Q9UL58 517 aaPredicted RBP13.37□□□□□ -0.27
LIG3-207ENST00000586119 UBIAD1Q9Y5Z9 338 aa13.37□□□□□ -0.27
LIG3-207ENST00000586119 RALGAPA2Q2PPJ7 1873 aa13.37□□□□□ -0.27
LIG3-207ENST00000586119 NRCAMQ92823 1304 aa13.37□□□□□ -0.27
LIG3-207ENST00000586119 POTEB3A0JP26 581 aa13.36□□□□□ -0.27
LIG3-207ENST00000586119 DDAH1O94760 285 aa13.36□□□□□ -0.27
LIG3-207ENST00000586119 CTNNB1P35222 781 aa13.36□□□□□ -0.27
LIG3-207ENST00000586119 TMEM62Q0P6H9 643 aa13.36□□□□□ -0.27
LIG3-207ENST00000586119 PPFIA1Q13136 1202 aa13.36□□□□□ -0.27
LIG3-207ENST00000586119 CLUL1Q15846 466 aa13.36□□□□□ -0.27
LIG3-207ENST00000586119 GRIK4Q16099 956 aa13.36□□□□□ -0.27
LIG3-207ENST00000586119 PTPROQ16827 1216 aa13.36□□□□□ -0.27
LIG3-207ENST00000586119 POTEBQ6S5H4 581 aa13.36□□□□□ -0.27
LIG3-207ENST00000586119 NFXL1Q6ZNB6 911 aa13.36□□□□□ -0.27
LIG3-207ENST00000586119 FIBCD1Q8N539 461 aa13.36□□□□□ -0.27
LIG3-207ENST00000586119 LINC01599Q8WXQ3 324 aa13.36□□□□□ -0.27
LIG3-207ENST00000586119 PGBD1Q96JS3 809 aa13.36□□□□□ -0.27
LIG3-207ENST00000586119 SAMD11Q96NU1 681 aa13.36□□□□□ -0.27
LIG3-207ENST00000586119 MAP3K14Q99558 947 aa13.36□□□□□ -0.27
LIG3-207ENST00000586119 LSG1Q9H089 658 aaKnown RBP13.36□□□□□ -0.27
LIG3-207ENST00000586119 PSTPIP2Q9H939 334 aa13.36□□□□□ -0.27
LIG3-207ENST00000586119 CLDND1Q9NY35 253 aa13.36□□□□□ -0.27
LIG3-207ENST00000586119 PCDHA6Q9UN73 950 aa13.36□□□□□ -0.27
LIG3-207ENST00000586119 PCDHA8Q9Y5H6 950 aa13.36□□□□□ -0.27
LIG3-207ENST00000586119 CDY2AQ9Y6F7 541 aa13.36□□□□□ -0.27
LIG3-207ENST00000586119 EVPLQ92817 2033 aa13.35□□□□□ -0.27
LIG3-207ENST00000586119 COL4A6Q14031 1691 aa13.35□□□□□ -0.27
LIG3-207ENST00000586119 SMARCA1P28370 1054 aa13.35□□□□□ -0.27
LIG3-207ENST00000586119 HOXD11P31277 338 aaPredicted RBP13.35□□□□□ -0.27
LIG3-207ENST00000586119 KIF5BP33176 963 aa13.35□□□□□ -0.27
LIG3-207ENST00000586119 BMPR1AP36894 532 aa13.35□□□□□ -0.27
LIG3-207ENST00000586119 CAMK1Q14012 370 aa13.35□□□□□ -0.27
LIG3-207ENST00000586119 FBXO47Q5MNV8 452 aa13.35□□□□□ -0.27
LIG3-207ENST00000586119 XRRA1Q6P2D8 792 aa13.35□□□□□ -0.27
LIG3-207ENST00000586119 CASC1Q6TDU7 716 aa13.35□□□□□ -0.27
LIG3-207ENST00000586119 SKAP1Q86WV1 359 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms