RNA–Protein interactions for RNA: ENST00000583877.5

NUP85-223, Transcript of nucleoporin 85, human

TSL 3

Gene NUP85, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP85-223	ENST00000583877	STOX1	Q6ZVD7	989 aa		10.16	□□□□□ -0.78
NUP85-223	ENST00000583877	ADHFE1	Q8IWW8	467 aa		10.16	□□□□□ -0.78
NUP85-223	ENST00000583877	SAMD3	Q8N6K7	520 aa		10.16	□□□□□ -0.78
NUP85-223	ENST00000583877	FBXL18	Q96ME1	805 aa		10.16	□□□□□ -0.78
NUP85-223	ENST00000583877	PDCD2L	Q9BRP1	358 aa		10.16	□□□□□ -0.78
NUP85-223	ENST00000583877	AMN	Q9BXJ7	453 aa		10.16	□□□□□ -0.78
NUP85-223	ENST00000583877	UPF3B	Q9BZI7	483 aa	Known RBP	10.16	□□□□□ -0.78
NUP85-223	ENST00000583877	TUT1	Q9H6E5	874 aa	Known RBP	10.16	□□□□□ -0.78
NUP85-223	ENST00000583877	MYH9	P35579	1960 aa	Known RBP	10.15	□□□□□ -0.78
NUP85-223	ENST00000583877	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	10.15	□□□□□ -0.78
NUP85-223	ENST00000583877	C5orf67	F2Z3F1	127 aa		10.15	□□□□□ -0.78
NUP85-223	ENST00000583877	RBAK-RBAKDN	I3L0D1	243 aa		10.15	□□□□□ -0.78
NUP85-223	ENST00000583877	TREH	O43280	583 aa		10.15	□□□□□ -0.78
NUP85-223	ENST00000583877	DHX16	O60231	1041 aa	Known RBP	10.15	□□□□□ -0.78
NUP85-223	ENST00000583877	KDM4A	O75164	1064 aa		10.15	□□□□□ -0.78
NUP85-223	ENST00000583877	ZMYND10	O75800	440 aa		10.15	□□□□□ -0.78
NUP85-223	ENST00000583877	UPP2	O95045	317 aa		10.15	□□□□□ -0.78
NUP85-223	ENST00000583877	MYCL	P12524	364 aa	Predicted RBP	10.15	□□□□□ -0.78
NUP85-223	ENST00000583877	UBA1	P22314	1058 aa	Known RBP	10.15	□□□□□ -0.78
NUP85-223	ENST00000583877	FOXK1	P85037	733 aa		10.15	□□□□□ -0.78
NUP85-223	ENST00000583877	SP2	Q02086	613 aa		10.15	□□□□□ -0.78
NUP85-223	ENST00000583877	PGM5	Q15124	567 aa		10.15	□□□□□ -0.78
NUP85-223	ENST00000583877	DIEXF	Q68CQ4	756 aa	Known RBP	10.15	□□□□□ -0.78
NUP85-223	ENST00000583877	EP400NL	Q6ZTU2	488 aa		10.15	□□□□□ -0.78
NUP85-223	ENST00000583877	VSIG10L	Q86VR7	867 aa		10.15	□□□□□ -0.78
NUP85-223	ENST00000583877	ENAH	Q8N8S7	591 aa	Predicted RBP	10.15	□□□□□ -0.78
NUP85-223	ENST00000583877	APBB2	Q92870	758 aa		10.15	□□□□□ -0.78
NUP85-223	ENST00000583877	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	10.15	□□□□□ -0.78
NUP85-223	ENST00000583877	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	10.15	□□□□□ -0.78
NUP85-223	ENST00000583877	SLC24A3	Q9HC58	644 aa		10.15	□□□□□ -0.78
NUP85-223	ENST00000583877	VAT1L	Q9HCJ6	419 aa		10.15	□□□□□ -0.78
NUP85-223	ENST00000583877	CLDND1	Q9NY35	253 aa		10.15	□□□□□ -0.78
NUP85-223	ENST00000583877	BOLA1	Q9Y3E2	137 aa		10.15	□□□□□ -0.78
NUP85-223	ENST00000583877	TRIM6-TRIM34	B2RNG4	842 aa		10.14	□□□□□ -0.79
NUP85-223	ENST00000583877	DPYSL4	O14531	572 aa		10.14	□□□□□ -0.79
NUP85-223	ENST00000583877	SORBS3	O60504	671 aa		10.14	□□□□□ -0.79
NUP85-223	ENST00000583877	LGALS2	P05162	132 aa		10.14	□□□□□ -0.79
NUP85-223	ENST00000583877	RB1	P06400	928 aa		10.14	□□□□□ -0.79
NUP85-223	ENST00000583877	SMIM10L2A	P0DMW4	78 aa		10.14	□□□□□ -0.79
NUP85-223	ENST00000583877	SMIM10L2B	P0DMW5	78 aa		10.14	□□□□□ -0.79
NUP85-223	ENST00000583877	GNAT1	P11488	350 aa		10.14	□□□□□ -0.79
NUP85-223	ENST00000583877	IRS1	P35568	1242 aa		10.14	□□□□□ -0.79
NUP85-223	ENST00000583877	LTBR	P36941	435 aa		10.14	□□□□□ -0.79
NUP85-223	ENST00000583877	MLLT3	P42568	568 aa	Predicted RBP	10.14	□□□□□ -0.79
NUP85-223	ENST00000583877	SMAD2	Q15796	467 aa	Known RBP	10.14	□□□□□ -0.79
NUP85-223	ENST00000583877	CTC1	Q2NKJ3	1217 aa		10.14	□□□□□ -0.79
NUP85-223	ENST00000583877	RPAIN	Q86UA6	219 aa		10.14	□□□□□ -0.79
NUP85-223	ENST00000583877	MTMR8	Q96EF0	704 aa		10.14	□□□□□ -0.79
NUP85-223	ENST00000583877	MFSD14A	Q96MC6	490 aa		10.14	□□□□□ -0.79
NUP85-223	ENST00000583877	POP1	Q99575	1024 aa	Known RBP	10.14	□□□□□ -0.79
NUP85-223	ENST00000583877	IFIH1	Q9BYX4	1025 aa	Known RBP	10.14	□□□□□ -0.79
NUP85-223	ENST00000583877	LMAN2L	Q9H0V9	348 aa		10.14	□□□□□ -0.79
NUP85-223	ENST00000583877	RNPEP	Q9H4A4	650 aa		10.14	□□□□□ -0.79
NUP85-223	ENST00000583877	MLXIP	Q9HAP2	919 aa		10.14	□□□□□ -0.79
NUP85-223	ENST00000583877	RWDD3	Q9Y3V2	267 aa		10.14	□□□□□ -0.79
NUP85-223	ENST00000583877	GTF3C3	Q9Y5Q9	886 aa		10.14	□□□□□ -0.79
NUP85-223	ENST00000583877	ZFHX2	Q9C0A1	2572 aa	Predicted RBP	10.13	□□□□□ -0.79
NUP85-223	ENST00000583877		B4E1Z4	1266 aa		10.13	□□□□□ -0.79
NUP85-223	ENST00000583877	CTSH	P09668	335 aa		10.13	□□□□□ -0.79
NUP85-223	ENST00000583877	CCND2	P30279	289 aa		10.13	□□□□□ -0.79
NUP85-223	ENST00000583877	CTNNB1	P35222	781 aa		10.13	□□□□□ -0.79
NUP85-223	ENST00000583877	TRAF1	Q13077	416 aa		10.13	□□□□□ -0.79
NUP85-223	ENST00000583877	HERC4	Q5GLZ8	1057 aa	Predicted RBP	10.13	□□□□□ -0.79
NUP85-223	ENST00000583877	FAM26D	Q5JW98	314 aa		10.13	□□□□□ -0.79
NUP85-223	ENST00000583877	HFE2	Q6ZVN8	426 aa		10.13	□□□□□ -0.79
NUP85-223	ENST00000583877	FIBCD1	Q8N539	461 aa		10.13	□□□□□ -0.79
NUP85-223	ENST00000583877	IL31RA	Q8NI17	732 aa		10.13	□□□□□ -0.79
NUP85-223	ENST00000583877	IL17RA	Q96F46	866 aa		10.13	□□□□□ -0.79
NUP85-223	ENST00000583877	C11orf84	Q9BUA3	381 aa	Predicted RBP	10.13	□□□□□ -0.79
NUP85-223	ENST00000583877	USP26	Q9BXU7	913 aa		10.13	□□□□□ -0.79
NUP85-223	ENST00000583877	OSBPL7	Q9BZF2	842 aa		10.13	□□□□□ -0.79
NUP85-223	ENST00000583877	ZSWIM5	Q9P217	1185 aa		10.13	□□□□□ -0.79
NUP85-223	ENST00000583877	PCDHA1	Q9Y5I3	950 aa		10.13	□□□□□ -0.79
NUP85-223	ENST00000583877	RIF1	Q5UIP0	2472 aa	Known RBP	10.12	□□□□□ -0.79
NUP85-223	ENST00000583877	KLRF2	D3W0D1	207 aa		10.12	□□□□□ -0.79
NUP85-223	ENST00000583877	NOP56	O00567	594 aa	Known RBP	10.12	□□□□□ -0.79
NUP85-223	ENST00000583877	ZBTB5	O15062	677 aa		10.12	□□□□□ -0.79
NUP85-223	ENST00000583877	MBTPS2	O43462	519 aa		10.12	□□□□□ -0.79
NUP85-223	ENST00000583877	PPP1R11	O60927	126 aa	Predicted RBP	10.12	□□□□□ -0.79
NUP85-223	ENST00000583877	STAM2	O75886	525 aa		10.12	□□□□□ -0.79
NUP85-223	ENST00000583877	LINC00271	P0C7V0	271 aa		10.12	□□□□□ -0.79
NUP85-223	ENST00000583877	SDS	P20132	328 aa		10.12	□□□□□ -0.79
NUP85-223	ENST00000583877	HOXA13	P31271	388 aa	Predicted RBP	10.12	□□□□□ -0.79
NUP85-223	ENST00000583877	BMPR1A	P36894	532 aa		10.12	□□□□□ -0.79
NUP85-223	ENST00000583877	ADAM17	P78536	824 aa		10.12	□□□□□ -0.79
NUP85-223	ENST00000583877	HYAL1	Q12794	435 aa		10.12	□□□□□ -0.79
NUP85-223	ENST00000583877	GNPTAB	Q3T906	1256 aa		10.12	□□□□□ -0.79
NUP85-223	ENST00000583877	IFIT1B	Q5T764	474 aa	Known RBP	10.12	□□□□□ -0.79
NUP85-223	ENST00000583877	METTL7B	Q6UX53	244 aa		10.12	□□□□□ -0.79
NUP85-223	ENST00000583877	STAG2	Q8N3U4	1231 aa		10.12	□□□□□ -0.79
NUP85-223	ENST00000583877	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	10.12	□□□□□ -0.79
NUP85-223	ENST00000583877	CLP1	Q92989	425 aa	Known RBP	10.12	□□□□□ -0.79
NUP85-223	ENST00000583877	RILPL2	Q969X0	211 aa		10.12	□□□□□ -0.79
NUP85-223	ENST00000583877	KRT23	Q9C075	422 aa		10.12	□□□□□ -0.79
NUP85-223	ENST00000583877	SETD4	Q9NVD3	440 aa		10.12	□□□□□ -0.79
NUP85-223	ENST00000583877	ADGRA3	Q8IWK6	1321 aa		10.11	□□□□□ -0.79
NUP85-223	ENST00000583877	PTPRZ1	P23471	2315 aa	Predicted RBP	10.11	□□□□□ -0.79
NUP85-223	ENST00000583877	GCOM1	H8Y6P7	765 aa	Predicted RBP	10.11	□□□□□ -0.79
NUP85-223	ENST00000583877	GRM6	O15303	877 aa		10.11	□□□□□ -0.79
NUP85-223	ENST00000583877	POLR2M	P0CAP2	368 aa		10.11	□□□□□ -0.79

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