RNA–Protein interactions for RNA: ENST00000581737.1

CSNK1D-220, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-220ENST00000581737 ITGB5P18084 799 aa15.25■□□□□ 0.03
CSNK1D-220ENST00000581737 U2AF2P26368 475 aaKnown RBP eCLIP15.25■□□□□ 0.039e-13■■■■■ 29.8
CSNK1D-220ENST00000581737 NEDD9Q14511 834 aa15.25■□□□□ 0.03
CSNK1D-220ENST00000581737 C16orf59Q7L2K0 433 aa15.25■□□□□ 0.03
CSNK1D-220ENST00000581737 PLA2G4DQ86XP0 818 aa15.25■□□□□ 0.03
CSNK1D-220ENST00000581737 SYMPKQ92797 1274 aaKnown RBP15.25■□□□□ 0.03
CSNK1D-220ENST00000581737 SENP7Q9BQF6 1050 aa15.25■□□□□ 0.03
CSNK1D-220ENST00000581737 UPF3AQ9H1J1 476 aaKnown RBP15.25■□□□□ 0.03
CSNK1D-220ENST00000581737 ZNF576Q9H609 170 aa15.25■□□□□ 0.03
CSNK1D-220ENST00000581737 DDX41Q9UJV9 622 aaKnown RBP15.25■□□□□ 0.03
CSNK1D-220ENST00000581737 NOL7Q9UMY1 257 aaKnown RBP15.25■□□□□ 0.03
CSNK1D-220ENST00000581737 GNEQ9Y223 722 aaKnown RBP15.25■□□□□ 0.03
CSNK1D-220ENST00000581737 TMEM265A0A087WTH1 108 aa15.24■□□□□ 0.03
CSNK1D-220ENST00000581737 CYP3A7-CYP3A51PA0A087WV96 503 aa15.24■□□□□ 0.03
CSNK1D-220ENST00000581737 GOLGA6L3A6NEY3 463 aa15.24■□□□□ 0.03
CSNK1D-220ENST00000581737 TNFRSF10AO00220 468 aa15.24■□□□□ 0.03
CSNK1D-220ENST00000581737 ADAMTS4O75173 837 aa15.24■□□□□ 0.03
CSNK1D-220ENST00000581737 ARIH2O95376 493 aa15.24■□□□□ 0.03
CSNK1D-220ENST00000581737 RAG1P15918 1043 aa15.24■□□□□ 0.03
CSNK1D-220ENST00000581737 UBA1P22314 1058 aaKnown RBP15.24■□□□□ 0.03
CSNK1D-220ENST00000581737 CYP3A7P24462 503 aa15.24■□□□□ 0.03
CSNK1D-220ENST00000581737 TRAPPC10P48553 1259 aa15.24■□□□□ 0.03
CSNK1D-220ENST00000581737 CPT1AP50416 773 aa15.24■□□□□ 0.03
CSNK1D-220ENST00000581737 GJA9P57773 515 aa15.24■□□□□ 0.03
CSNK1D-220ENST00000581737 FPGSQ05932 587 aa15.24■□□□□ 0.03
CSNK1D-220ENST00000581737 RESTQ13127 1097 aa15.24■□□□□ 0.03
CSNK1D-220ENST00000581737 LAMC2Q13753 1193 aa15.24■□□□□ 0.03
CSNK1D-220ENST00000581737 LETM2Q2VYF4 491 aa15.24■□□□□ 0.03
CSNK1D-220ENST00000581737 PPP4R3AQ6IN85 833 aa15.24■□□□□ 0.03
CSNK1D-220ENST00000581737 FERMT3Q86UX7 667 aa15.24■□□□□ 0.03
CSNK1D-220ENST00000581737 DHX37Q8IY37 1157 aaKnown RBP15.24■□□□□ 0.03
CSNK1D-220ENST00000581737 OR6J1Q8NGC5 347 aa15.24■□□□□ 0.03
CSNK1D-220ENST00000581737 PPM1EQ8WY54 764 aa15.24■□□□□ 0.03
CSNK1D-220ENST00000581737 EMID1Q96A84 441 aaPredicted RBP15.24■□□□□ 0.03
CSNK1D-220ENST00000581737 ZFP91Q96JP5 570 aaPredicted RBP15.24■□□□□ 0.03
CSNK1D-220ENST00000581737 SPATA32Q96LK8 384 aa15.24■□□□□ 0.03
CSNK1D-220ENST00000581737 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.24■□□□□ 0.038e-11■■□□□ 12.2
CSNK1D-220ENST00000581737 KCNH7Q9NS40 1196 aa15.24■□□□□ 0.03
CSNK1D-220ENST00000581737 TMEM39AQ9NV64 488 aa15.24■□□□□ 0.03
CSNK1D-220ENST00000581737 CHD7Q9P2D1 2997 aa15.24■□□□□ 0.03
CSNK1D-220ENST00000581737 TCEAL9Q9UHQ7 104 aa15.24■□□□□ 0.03
CSNK1D-220ENST00000581737 MYH15Q9Y2K3 1946 aa15.23■□□□□ 0.03
CSNK1D-220ENST00000581737 IGLV3-22A0A075B6J6 115 aa15.23■□□□□ 0.03
CSNK1D-220ENST00000581737 MYADML2A6NDP7 307 aa15.23■□□□□ 0.03
CSNK1D-220ENST00000581737 FAM86B1E9PN63 330 aa15.23■□□□□ 0.03
CSNK1D-220ENST00000581737 DYNC1LI2O43237 492 aaPredicted RBP15.23■□□□□ 0.03
CSNK1D-220ENST00000581737 ADCY6O43306 1168 aa15.23■□□□□ 0.03
CSNK1D-220ENST00000581737 ZEB2O60315 1214 aa15.23■□□□□ 0.03
CSNK1D-220ENST00000581737 GGPS1O95749 300 aa15.23■□□□□ 0.03
CSNK1D-220ENST00000581737 FAM86B2P0C5J1 330 aa15.23■□□□□ 0.03
CSNK1D-220ENST00000581737 C6orf222P0C671 652 aaPredicted RBP15.23■□□□□ 0.03
CSNK1D-220ENST00000581737 CST5P28325 142 aaPredicted RBP15.23■□□□□ 0.03
CSNK1D-220ENST00000581737 DEKP35659 375 aaKnown RBP15.23■□□□□ 0.03
CSNK1D-220ENST00000581737 NKX3-2P78367 333 aa15.23■□□□□ 0.03
CSNK1D-220ENST00000581737 DNM1Q05193 864 aaKnown RBP15.23■□□□□ 0.03
CSNK1D-220ENST00000581737 ORC2Q13416 577 aaPredicted RBP15.23■□□□□ 0.03
CSNK1D-220ENST00000581737 LY6KQ17RY6 165 aa15.23■□□□□ 0.03
CSNK1D-220ENST00000581737 PRR16Q569H4 304 aa15.23■□□□□ 0.03
CSNK1D-220ENST00000581737 METTL7BQ6UX53 244 aa15.23■□□□□ 0.03
CSNK1D-220ENST00000581737 PCSK9Q8NBP7 692 aaKnown RBP15.23■□□□□ 0.03
CSNK1D-220ENST00000581737 TIFAQ96CG3 184 aa15.23■□□□□ 0.03
CSNK1D-220ENST00000581737 SDF4Q9BRK5 362 aa15.23■□□□□ 0.03
CSNK1D-220ENST00000581737 MLXIPQ9HAP2 919 aa15.23■□□□□ 0.03
CSNK1D-220ENST00000581737 DDX25Q9UHL0 483 aaKnown RBP15.23■□□□□ 0.03
CSNK1D-220ENST00000581737 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.22■□□□□ 0.03
CSNK1D-220ENST00000581737 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.22■□□□□ 0.03
CSNK1D-220ENST00000581737 CCNT1O60563 726 aaKnown RBP15.22■□□□□ 0.03
CSNK1D-220ENST00000581737 KCNA2P16389 499 aa15.22■□□□□ 0.03
CSNK1D-220ENST00000581737 ARHGAP1Q07960 439 aa15.22■□□□□ 0.03
CSNK1D-220ENST00000581737 SEMA3FQ13275 785 aa15.22■□□□□ 0.03
CSNK1D-220ENST00000581737 FSCN1Q16658 493 aaKnown RBP15.22■□□□□ 0.03
CSNK1D-220ENST00000581737 FOXD4L6Q3SYB3 417 aaPredicted RBP15.22■□□□□ 0.03
CSNK1D-220ENST00000581737 Q4G0T1 1027 aa15.22■□□□□ 0.03
CSNK1D-220ENST00000581737 CELF3Q5SZQ8 465 aaKnown RBP15.22■□□□□ 0.03
CSNK1D-220ENST00000581737 FOXD4L3Q6VB84 417 aaPredicted RBP15.22■□□□□ 0.03
CSNK1D-220ENST00000581737 ANKRD33Q7Z3H0 272 aa15.22■□□□□ 0.03
CSNK1D-220ENST00000581737 CYP2W1Q8TAV3 490 aa15.22■□□□□ 0.03
CSNK1D-220ENST00000581737 MBOAT7Q96N66 472 aa15.22■□□□□ 0.03
CSNK1D-220ENST00000581737 TSEN34Q9BSV6 310 aaKnown RBP15.22■□□□□ 0.03
CSNK1D-220ENST00000581737 PBX4Q9BYU1 374 aa15.22■□□□□ 0.03
CSNK1D-220ENST00000581737 GZF1Q9H116 711 aaPredicted RBP15.22■□□□□ 0.03
CSNK1D-220ENST00000581737 AGO4Q9HCK5 861 aaKnown RBP15.22■□□□□ 0.03
CSNK1D-220ENST00000581737 NFASCO94856 1347 aa15.21■□□□□ 0.03
CSNK1D-220ENST00000581737 DOCK5Q9H7D0 1870 aa15.21■□□□□ 0.03
CSNK1D-220ENST00000581737 FAM205CA6NFA0 338 aa15.21■□□□□ 0.03
CSNK1D-220ENST00000581737 KIF28PB7ZC32 967 aa15.21■□□□□ 0.03
CSNK1D-220ENST00000581737 IPO5O00410 1097 aaKnown RBP15.21■□□□□ 0.03
CSNK1D-220ENST00000581737 NOP56O00567 594 aaKnown RBP15.21■□□□□ 0.03
CSNK1D-220ENST00000581737 KPNA6O60684 536 aa15.21■□□□□ 0.03
CSNK1D-220ENST00000581737 TDP2O95551 362 aa15.21■□□□□ 0.03
CSNK1D-220ENST00000581737 ACLYP53396 1101 aa15.21■□□□□ 0.03
CSNK1D-220ENST00000581737 ADGRE1Q14246 886 aa15.21■□□□□ 0.03
CSNK1D-220ENST00000581737 EARS2Q5JPH6 523 aaKnown RBP15.21■□□□□ 0.03
CSNK1D-220ENST00000581737 GNASQ5JWF2 1037 aa15.21■□□□□ 0.03
CSNK1D-220ENST00000581737 MYSM1Q5VVJ2 828 aa15.21■□□□□ 0.03
CSNK1D-220ENST00000581737 CCSAPQ6IQ19 270 aaPredicted RBP15.21■□□□□ 0.03
CSNK1D-220ENST00000581737 CAVIN1Q6NZI2 390 aaKnown RBP15.21■□□□□ 0.03
CSNK1D-220ENST00000581737 KLHDC9Q8NEP7 349 aa15.21■□□□□ 0.03
CSNK1D-220ENST00000581737 PPTC7Q8NI37 304 aa15.21■□□□□ 0.03
CSNK1D-220ENST00000581737 COPS5Q92905 334 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms