RNA–Protein interactions for RNA: ENST00000580095.5

TOP3A-209, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 1 (best)

Gene TOP3A, Length 2,929 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-209ENST00000580095 EMILIN3Q9NT22 766 aa11.58□□□□□ -0.56
TOP3A-209ENST00000580095 RGL1Q9NZL6 768 aa11.58□□□□□ -0.56
TOP3A-209ENST00000580095 SNX12Q9UMY4 172 aa11.58□□□□□ -0.56
TOP3A-209ENST00000580095 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.58□□□□□ -0.56
TOP3A-209ENST00000580095 CCDC66A2RUB6 948 aa11.57□□□□□ -0.56
TOP3A-209ENST00000580095 F5H6K3 240 aa11.57□□□□□ -0.56
TOP3A-209ENST00000580095 hCG_1984214I3L0E3 225 aa11.57□□□□□ -0.56
TOP3A-209ENST00000580095 CHMP2AO43633 222 aa11.57□□□□□ -0.56
TOP3A-209ENST00000580095 TACC1O75410 805 aa11.57□□□□□ -0.56
TOP3A-209ENST00000580095 PRPF6O94906 941 aaKnown RBP11.57□□□□□ -0.56
TOP3A-209ENST00000580095 KLRC3Q07444 240 aa11.57□□□□□ -0.56
TOP3A-209ENST00000580095 ADAM9Q13443 819 aa11.57□□□□□ -0.56
TOP3A-209ENST00000580095 RRP1BQ14684 758 aaKnown RBP11.57□□□□□ -0.56
TOP3A-209ENST00000580095 FIGNQ5HY92 759 aa11.57□□□□□ -0.56
TOP3A-209ENST00000580095 ZNF713Q8N859 430 aaPredicted RBP11.57□□□□□ -0.56
TOP3A-209ENST00000580095 TBC1D5Q92609 795 aa11.57□□□□□ -0.56
TOP3A-209ENST00000580095 ADAMTS1Q9UHI8 967 aa11.57□□□□□ -0.56
TOP3A-209ENST00000580095 KLRG2A4D1S0 409 aaPredicted RBP11.57□□□□□ -0.56
TOP3A-209ENST00000580095 GH2P01242 217 aa11.57□□□□□ -0.56
TOP3A-209ENST00000580095 CHRNA5P30532 468 aa11.57□□□□□ -0.56
TOP3A-209ENST00000580095 HSP90B2PQ58FF3 399 aa11.57□□□□□ -0.56
TOP3A-209ENST00000580095 FOXR1Q6PIV2 292 aa11.57□□□□□ -0.56
TOP3A-209ENST00000580095 KSR1Q8IVT5 923 aa11.57□□□□□ -0.56
TOP3A-209ENST00000580095 PIGOQ8TEQ8 1089 aa11.57□□□□□ -0.56
TOP3A-209ENST00000580095 SCAF8Q9UPN6 1271 aaKnown RBP11.57□□□□□ -0.56
TOP3A-209ENST00000580095 PCDHA2Q9Y5H9 948 aa11.57□□□□□ -0.56
TOP3A-209ENST00000580095 CLIC2O15247 247 aa11.56□□□□□ -0.56
TOP3A-209ENST00000580095 NDUFB10O96000 172 aa11.56□□□□□ -0.56
TOP3A-209ENST00000580095 MYBP10242 640 aa11.56□□□□□ -0.56
TOP3A-209ENST00000580095 NR2F2P24468 414 aa11.56□□□□□ -0.56
TOP3A-209ENST00000580095 PPP1R2P41236 205 aa11.56□□□□□ -0.56
TOP3A-209ENST00000580095 ZYXQ15942 572 aaKnown RBP11.56□□□□□ -0.56
TOP3A-209ENST00000580095 SFR1Q86XK3 245 aa11.56□□□□□ -0.56
TOP3A-209ENST00000580095 CCDC65Q8IXS2 484 aa11.56□□□□□ -0.56
TOP3A-209ENST00000580095 PROCA1Q8NCQ7 364 aaPredicted RBP11.56□□□□□ -0.56
TOP3A-209ENST00000580095 TRIM58Q8NG06 486 aa11.56□□□□□ -0.56
TOP3A-209ENST00000580095 OSBPL9Q96SU4 736 aa11.56□□□□□ -0.56
TOP3A-209ENST00000580095 JRKLQ9Y4A0 524 aa11.56□□□□□ -0.56
TOP3A-209ENST00000580095 ESYT3A0FGR9 886 aa11.56□□□□□ -0.56
TOP3A-209ENST00000580095 ZSCAN5CA6NGD5 496 aaPredicted RBP11.56□□□□□ -0.56
TOP3A-209ENST00000580095 EIF3JO75822 258 aaKnown RBP11.56□□□□□ -0.56
TOP3A-209ENST00000580095 FGFR1OPO95684 399 aaKnown RBP11.56□□□□□ -0.56
TOP3A-209ENST00000580095 SLC9A1P19634 815 aa11.56□□□□□ -0.56
TOP3A-209ENST00000580095 HNRNPH3P31942 346 aaKnown RBP11.56□□□□□ -0.56
TOP3A-209ENST00000580095 EPS15P42566 896 aa11.56□□□□□ -0.56
TOP3A-209ENST00000580095 PPARDQ03181 441 aa11.56□□□□□ -0.56
TOP3A-209ENST00000580095 COBLL1Q53SF7 1204 aa11.56□□□□□ -0.56
TOP3A-209ENST00000580095 DCAF17Q5H9S7 520 aaPredicted RBP11.56□□□□□ -0.56
TOP3A-209ENST00000580095 WDR93Q6P2C0 686 aa11.56□□□□□ -0.56
TOP3A-209ENST00000580095 TRMT1LQ7Z2T5 733 aaKnown RBP11.56□□□□□ -0.56
TOP3A-209ENST00000580095 REEP2Q9BRK0 252 aa11.56□□□□□ -0.56
TOP3A-209ENST00000580095 RABEP2Q9H5N1 569 aa11.56□□□□□ -0.56
TOP3A-209ENST00000580095 FAM204AQ9H8W3 233 aa11.56□□□□□ -0.56
TOP3A-209ENST00000580095 KCNMB3Q9NPA1 279 aa11.56□□□□□ -0.56
TOP3A-209ENST00000580095 FEZ2Q9UHY8 353 aaPredicted RBP11.56□□□□□ -0.56
TOP3A-209ENST00000580095 A0A087X0T9 212 aa11.56□□□□□ -0.56
TOP3A-209ENST00000580095 A0A1W2PRG0 241 aa11.56□□□□□ -0.56
TOP3A-209ENST00000580095 FAM228BP0C875 321 aa11.56□□□□□ -0.56
TOP3A-209ENST00000580095 NPR1P16066 1061 aa11.56□□□□□ -0.56
TOP3A-209ENST00000580095 ECE1P42892 770 aa11.56□□□□□ -0.56
TOP3A-209ENST00000580095 GPS2Q13227 327 aa11.56□□□□□ -0.56
TOP3A-209ENST00000580095 ORC2Q13416 577 aaPredicted RBP11.56□□□□□ -0.56
TOP3A-209ENST00000580095 AOC3Q16853 763 aa11.56□□□□□ -0.56
TOP3A-209ENST00000580095 CCDC181Q5TID7 509 aa11.56□□□□□ -0.56
TOP3A-209ENST00000580095 SFMBT2Q5VUG0 894 aa11.56□□□□□ -0.56
TOP3A-209ENST00000580095 TCERG1LQ5VWI1 586 aa11.56□□□□□ -0.56
TOP3A-209ENST00000580095 HHIPL2Q6UWX4 724 aa11.56□□□□□ -0.56
TOP3A-209ENST00000580095 SPATA4Q8NEY3 305 aa11.56□□□□□ -0.56
TOP3A-209ENST00000580095 SELENOOQ9BVL4 669 aa11.56□□□□□ -0.56
TOP3A-209ENST00000580095 TMX4Q9H1E5 349 aaPredicted RBP11.56□□□□□ -0.56
TOP3A-209ENST00000580095 BHMT2Q9H2M3 363 aa11.56□□□□□ -0.56
TOP3A-209ENST00000580095 DHX36Q9H2U1 1008 aaKnown RBP11.56□□□□□ -0.56
TOP3A-209ENST00000580095 KCTD10Q9H3F6 313 aa11.56□□□□□ -0.56
TOP3A-209ENST00000580095 BCS1LQ9Y276 419 aa11.56□□□□□ -0.56
TOP3A-209ENST00000580095 MYH10P35580 1976 aa11.55□□□□□ -0.56
TOP3A-209ENST00000580095 EML1O00423 815 aa11.55□□□□□ -0.56
TOP3A-209ENST00000580095 RNF40O75150 1001 aa11.55□□□□□ -0.56
TOP3A-209ENST00000580095 SPATA31C1P0DKV0 1188 aa11.55□□□□□ -0.56
TOP3A-209ENST00000580095 HOXD13P35453 343 aa11.55□□□□□ -0.56
TOP3A-209ENST00000580095 GGCXP38435 758 aa11.55□□□□□ -0.56
TOP3A-209ENST00000580095 CASP4P49662 377 aa11.55□□□□□ -0.56
TOP3A-209ENST00000580095 SLC12A3P55017 1021 aa11.55□□□□□ -0.56
TOP3A-209ENST00000580095 CDK17Q00537 523 aa11.55□□□□□ -0.56
TOP3A-209ENST00000580095 CKAP4Q07065 602 aaKnown RBP11.55□□□□□ -0.56
TOP3A-209ENST00000580095 SEMA3FQ13275 785 aa11.55□□□□□ -0.56
TOP3A-209ENST00000580095 ZSCAN26Q16670 478 aa11.55□□□□□ -0.56
TOP3A-209ENST00000580095 GJB7Q6PEY0 223 aa11.55□□□□□ -0.56
TOP3A-209ENST00000580095 KRT27Q7Z3Y8 459 aa11.55□□□□□ -0.56
TOP3A-209ENST00000580095 EGFL6Q8IUX8 553 aa11.55□□□□□ -0.56
TOP3A-209ENST00000580095 TLR10Q9BXR5 811 aa11.55□□□□□ -0.56
TOP3A-209ENST00000580095 GBP3Q9H0R5 595 aa11.55□□□□□ -0.56
TOP3A-209ENST00000580095 RBM12Q9NTZ6 932 aaKnown RBP11.55□□□□□ -0.56
TOP3A-209ENST00000580095 PI4KBQ9UBF8 816 aa11.55□□□□□ -0.56
TOP3A-209ENST00000580095 HPCAL4Q9UM19 191 aa11.55□□□□□ -0.56
TOP3A-209ENST00000580095 CLRN2A0PK11 232 aa11.55□□□□□ -0.56
TOP3A-209ENST00000580095 ECE2O60344 883 aa11.55□□□□□ -0.56
TOP3A-209ENST00000580095 PALMO75781 387 aa11.55□□□□□ -0.56
TOP3A-209ENST00000580095 KLRC1P26715 233 aa11.55□□□□□ -0.56
TOP3A-209ENST00000580095 SPIRE1Q08AE8 756 aa11.55□□□□□ -0.56
TOP3A-209ENST00000580095 KCNH2Q12809 1159 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms