RNA–Protein interactions for RNA: ENST00000576353.5

SNF8-217, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-217ENST00000576353 TRIM50Q86XT4 487 aa26.69■■□□□ 1.86
SNF8-217ENST00000576353 CAGE1Q8TC20 777 aa26.69■■□□□ 1.86
SNF8-217ENST00000576353 ZNF577Q9BSK1 485 aa26.69■■□□□ 1.86
SNF8-217ENST00000576353 WNT8AQ9H1J5 351 aa26.69■■□□□ 1.86
SNF8-217ENST00000576353 SMARCAD1Q9H4L7 1026 aa26.69■■□□□ 1.86
SNF8-217ENST00000576353 TBC1D22BQ9NU19 505 aa26.69■■□□□ 1.86
SNF8-217ENST00000576353 C17orf102A2RUQ5 167 aa26.68■■□□□ 1.86
SNF8-217ENST00000576353 SMIM10L2AP0DMW4 78 aa26.68■■□□□ 1.86
SNF8-217ENST00000576353 SMIM10L2BP0DMW5 78 aa26.68■■□□□ 1.86
SNF8-217ENST00000576353 GNAT1P11488 350 aa26.68■■□□□ 1.86
SNF8-217ENST00000576353 ACTR2P61160 394 aa26.68■■□□□ 1.86
SNF8-217ENST00000576353 PTK7Q13308 1070 aa26.68■■□□□ 1.86
SNF8-217ENST00000576353 NONOQ15233 471 aaKnown RBP eCLIP26.68■■□□□ 1.86
SNF8-217ENST00000576353 RPUSD2Q8IZ73 545 aaKnown RBP26.68■■□□□ 1.86
SNF8-217ENST00000576353 GLG1Q92896 1179 aa26.68■■□□□ 1.86
SNF8-217ENST00000576353 CTAGE1Q96RT6 745 aa26.68■■□□□ 1.86
SNF8-217ENST00000576353 LLPHQ9BRT6 129 aaKnown RBP26.68■■□□□ 1.86
SNF8-217ENST00000576353 AZI2Q9H6S1 392 aa26.68■■□□□ 1.86
SNF8-217ENST00000576353 IL23AQ9NPF7 189 aa26.68■■□□□ 1.86
SNF8-217ENST00000576353 ERAP1Q9NZ08 941 aa26.68■■□□□ 1.86
SNF8-217ENST00000576353 CCDC194A0A1B0GVG4 234 aa26.67■■□□□ 1.86
SNF8-217ENST00000576353 ST18O60284 1047 aa26.67■■□□□ 1.86
SNF8-217ENST00000576353 CCDC83Q8IWF9 413 aa26.67■■□□□ 1.86
SNF8-217ENST00000576353 BRMS1Q9HCU9 246 aa26.67■■□□□ 1.86
SNF8-217ENST00000576353 JAK2O60674 1132 aa26.66■■□□□ 1.86
SNF8-217ENST00000576353 ST3GAL1Q11201 340 aa26.66■■□□□ 1.86
SNF8-217ENST00000576353 TRIM29Q14134 588 aa26.66■■□□□ 1.86
SNF8-217ENST00000576353 PSRC1Q6PGN9 363 aaPredicted RBP26.66■■□□□ 1.86
SNF8-217ENST00000576353 C16orf59Q7L2K0 433 aa26.66■■□□□ 1.86
SNF8-217ENST00000576353 AFAP1L1Q8TED9 768 aa26.66■■□□□ 1.86
SNF8-217ENST00000576353 RNPC3Q96LT9 517 aaKnown RBP26.66■■□□□ 1.86
SNF8-217ENST00000576353 RNPEPQ9H4A4 650 aa26.66■■□□□ 1.86
SNF8-217ENST00000576353 GJB4Q9NTQ9 266 aa26.66■■□□□ 1.86
SNF8-217ENST00000576353 TCEAL9Q9UHQ7 104 aa26.66■■□□□ 1.86
SNF8-217ENST00000576353 EMSYQ7Z589 1322 aa26.65■■□□□ 1.86
SNF8-217ENST00000576353 DDX39AO00148 427 aaKnown RBP26.65■■□□□ 1.86
SNF8-217ENST00000576353 DHX15O43143 795 aaKnown RBP26.65■■□□□ 1.86
SNF8-217ENST00000576353 EDIL3O43854 480 aa26.65■■□□□ 1.86
SNF8-217ENST00000576353 LGR5O75473 907 aa26.65■■□□□ 1.86
SNF8-217ENST00000576353 ATG7O95352 703 aa26.65■■□□□ 1.86
SNF8-217ENST00000576353 HOXC8P31273 242 aa26.65■■□□□ 1.86
SNF8-217ENST00000576353 RFC2P35250 354 aa26.65■■□□□ 1.86
SNF8-217ENST00000576353 ZNF200P98182 395 aaPredicted RBP26.65■■□□□ 1.86
SNF8-217ENST00000576353 TNPO1Q92973 898 aaKnown RBP26.65■■□□□ 1.86
SNF8-217ENST00000576353 ATP6V0A1Q93050 837 aa26.65■■□□□ 1.86
SNF8-217ENST00000576353 SCLYQ96I15 445 aa26.65■■□□□ 1.86
SNF8-217ENST00000576353 TBC1D32Q96NH3 1257 aa26.65■■□□□ 1.86
SNF8-217ENST00000576353 BUD13Q9BRD0 619 aaKnown RBP eCLIP26.65■■□□□ 1.86
SNF8-217ENST00000576353 NRCAMQ92823 1304 aa26.65■■□□□ 1.86
SNF8-217ENST00000576353 CYP3A7-CYP3A51PA0A087WV96 503 aa26.64■■□□□ 1.86
SNF8-217ENST00000576353 SOX1O00570 391 aaPredicted RBP26.64■■□□□ 1.86
SNF8-217ENST00000576353 PFKMP08237 780 aa26.64■■□□□ 1.86
SNF8-217ENST00000576353 IQCF3P0C7M6 154 aa26.64■■□□□ 1.86
SNF8-217ENST00000576353 ACRP10323 421 aa26.64■■□□□ 1.86
SNF8-217ENST00000576353 CYP3A7P24462 503 aa26.64■■□□□ 1.86
SNF8-217ENST00000576353 RBL2Q08999 1139 aa26.64■■□□□ 1.86
SNF8-217ENST00000576353 TMEM240Q5SV17 173 aa26.64■■□□□ 1.86
SNF8-217ENST00000576353 MOXD1Q6UVY6 613 aa26.64■■□□□ 1.86
SNF8-217ENST00000576353 ZNF365Q70YC5 407 aa26.64■■□□□ 1.86
SNF8-217ENST00000576353 LENG9Q96B70 501 aa26.64■■□□□ 1.86
SNF8-217ENST00000576353 SETD4Q9NVD3 440 aa26.64■■□□□ 1.86
SNF8-217ENST00000576353 CCNE2O96020 404 aa26.63■■□□□ 1.85
SNF8-217ENST00000576353 FGBP02675 491 aa26.63■■□□□ 1.85
SNF8-217ENST00000576353 SELPP16109 830 aa26.63■■□□□ 1.85
SNF8-217ENST00000576353 KRT2P35908 639 aa26.63■■□□□ 1.85
SNF8-217ENST00000576353 STAT5BP51692 787 aa26.63■■□□□ 1.85
SNF8-217ENST00000576353 HIC1Q14526 733 aa26.63■■□□□ 1.85
SNF8-217ENST00000576353 INF2Q27J81 1249 aa26.63■■□□□ 1.85
SNF8-217ENST00000576353 Q4G0T1 1027 aa26.63■■□□□ 1.85
SNF8-217ENST00000576353 PLPPR4Q7Z2D5 763 aa26.63■■□□□ 1.85
SNF8-217ENST00000576353 SERINC5Q86VE9 423 aa26.63■■□□□ 1.85
SNF8-217ENST00000576353 DHX38Q92620 1227 aaKnown RBP26.63■■□□□ 1.85
SNF8-217ENST00000576353 PCYT2Q99447 389 aa26.63■■□□□ 1.85
SNF8-217ENST00000576353 PARNO95453 639 aaKnown RBP26.62■■□□□ 1.85
SNF8-217ENST00000576353 SLC26A2P50443 739 aa26.62■■□□□ 1.85
SNF8-217ENST00000576353 KRT76Q01546 638 aa26.62■■□□□ 1.85
SNF8-217ENST00000576353 ZNF746Q6NUN9 644 aaPredicted RBP26.62■■□□□ 1.85
SNF8-217ENST00000576353 MIS18BP1Q6P0N0 1132 aa26.62■■□□□ 1.85
SNF8-217ENST00000576353 ABHD15Q6UXT9 468 aa26.62■■□□□ 1.85
SNF8-217ENST00000576353 OXER1Q8TDS5 423 aa26.62■■□□□ 1.85
SNF8-217ENST00000576353 UIMC1Q96RL1 719 aa26.62■■□□□ 1.85
SNF8-217ENST00000576353 RIT2Q99578 217 aa26.62■■□□□ 1.85
SNF8-217ENST00000576353 MTIF3Q9H2K0 278 aaKnown RBP26.62■■□□□ 1.85
SNF8-217ENST00000576353 MSH4O15457 936 aa26.61■■□□□ 1.85
SNF8-217ENST00000576353 TREHO43280 583 aa26.61■■□□□ 1.85
SNF8-217ENST00000576353 CKBP12277 381 aa26.61■■□□□ 1.85
SNF8-217ENST00000576353 MARK3P27448 753 aa26.61■■□□□ 1.85
SNF8-217ENST00000576353 HMGN5P82970 282 aaKnown RBP26.61■■□□□ 1.85
SNF8-217ENST00000576353 FAM160B1Q5W0V3 765 aa26.61■■□□□ 1.85
SNF8-217ENST00000576353 GPR153Q6NV75 609 aa26.61■■□□□ 1.85
SNF8-217ENST00000576353 LRRC8DQ7L1W4 858 aa26.61■■□□□ 1.85
SNF8-217ENST00000576353 NEK8Q86SG6 692 aa26.61■■□□□ 1.85
SNF8-217ENST00000576353 SMAP1Q8IYB5 467 aaPredicted RBP26.61■■□□□ 1.85
SNF8-217ENST00000576353 LRCH3Q96II8 777 aa26.61■■□□□ 1.85
SNF8-217ENST00000576353 NAP1L4Q99733 375 aaKnown RBP26.61■■□□□ 1.85
SNF8-217ENST00000576353 DOCK5Q9H7D0 1870 aa26.61■■□□□ 1.85
SNF8-217ENST00000576353 IGKV6D-21A0A0A0MT36 114 aa26.6■■□□□ 1.85
SNF8-217ENST00000576353 BACH1O14867 736 aa26.6■■□□□ 1.85
SNF8-217ENST00000576353 TDP2O95551 362 aa26.6■■□□□ 1.85
SNF8-217ENST00000576353 MMP1P03956 469 aa26.6■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms