RNA–Protein interactions for RNA: ENST00000575783.5

CTDNEP1-211, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-211ENST00000575783 USP26Q9BXU7 913 aa18.93■□□□□ 0.62
CTDNEP1-211ENST00000575783 RC3H2Q9HBD1 1191 aaKnown RBP18.93■□□□□ 0.62
CTDNEP1-211ENST00000575783 CCDC171Q6TFL3 1326 aa18.93■□□□□ 0.62
CTDNEP1-211ENST00000575783 OPLAHO14841 1288 aa18.92■□□□□ 0.62
CTDNEP1-211ENST00000575783 ITGB1P05556 798 aa18.92■□□□□ 0.62
CTDNEP1-211ENST00000575783 MCMDC2Q4G0Z9 681 aa18.92■□□□□ 0.62
CTDNEP1-211ENST00000575783 UTP14CQ5TAP6 766 aaKnown RBP18.92■□□□□ 0.62
CTDNEP1-211ENST00000575783 STOX1Q6ZVD7 989 aa18.92■□□□□ 0.62
CTDNEP1-211ENST00000575783 SPPL3Q8TCT6 385 aa18.92■□□□□ 0.62
CTDNEP1-211ENST00000575783 AMNQ9BXJ7 453 aa18.92■□□□□ 0.62
CTDNEP1-211ENST00000575783 MRPL42Q9Y6G3 142 aaKnown RBP18.92■□□□□ 0.62
CTDNEP1-211ENST00000575783 SPTBN4Q9H254 2564 aa18.91■□□□□ 0.62
CTDNEP1-211ENST00000575783 DGKIO75912 1065 aa18.91■□□□□ 0.62
CTDNEP1-211ENST00000575783 PARP1P09874 1014 aaKnown RBP18.91■□□□□ 0.62
CTDNEP1-211ENST00000575783 PCP11498 1178 aaKnown RBP18.91■□□□□ 0.62
CTDNEP1-211ENST00000575783 CCND2P30279 289 aa18.91■□□□□ 0.62
CTDNEP1-211ENST00000575783 LPIN1Q14693 890 aa18.91■□□□□ 0.62
CTDNEP1-211ENST00000575783 ASPRV1Q53RT3 343 aa18.91■□□□□ 0.62
CTDNEP1-211ENST00000575783 TRIM50Q86XT4 487 aa18.91■□□□□ 0.62
CTDNEP1-211ENST00000575783 KLHL23Q8NBE8 558 aa18.91■□□□□ 0.62
CTDNEP1-211ENST00000575783 POF1BQ8WVV4 589 aa18.91■□□□□ 0.62
CTDNEP1-211ENST00000575783 P2RX5Q93086 422 aa18.91■□□□□ 0.62
CTDNEP1-211ENST00000575783 EVI5LQ96CN4 794 aa18.91■□□□□ 0.62
CTDNEP1-211ENST00000575783 RNF41Q9H4P4 317 aaPredicted RBP18.91■□□□□ 0.62
CTDNEP1-211ENST00000575783 PTPRZ1P23471 2315 aaPredicted RBP18.9■□□□□ 0.62
CTDNEP1-211ENST00000575783 A0A0D9SFI3 127 aa18.9■□□□□ 0.62
CTDNEP1-211ENST00000575783 TRIM6-TRIM34B2RNG4 842 aa18.9■□□□□ 0.62
CTDNEP1-211ENST00000575783 PPFIA3O75145 1194 aa18.9■□□□□ 0.62
CTDNEP1-211ENST00000575783 KDM4AO75164 1064 aa18.9■□□□□ 0.62
CTDNEP1-211ENST00000575783 CYFIP1Q7L576 1253 aa18.9■□□□□ 0.62
CTDNEP1-211ENST00000575783 ASCL5Q7RTU5 278 aa18.9■□□□□ 0.62
CTDNEP1-211ENST00000575783 FCHSD1Q86WN1 690 aa18.9■□□□□ 0.62
CTDNEP1-211ENST00000575783 MICAL1Q8TDZ2 1067 aa18.9■□□□□ 0.62
CTDNEP1-211ENST00000575783 LMBR1Q8WVP7 490 aa18.9■□□□□ 0.62
CTDNEP1-211ENST00000575783 TLE6Q9H808 572 aa18.9■□□□□ 0.62
CTDNEP1-211ENST00000575783 EHMT1Q9H9B1 1298 aa18.9■□□□□ 0.62
CTDNEP1-211ENST00000575783 PCDHGC5Q9Y5F6 944 aa18.9■□□□□ 0.62
CTDNEP1-211ENST00000575783 NEDD4P46934 1319 aa18.9■□□□□ 0.62
CTDNEP1-211ENST00000575783 CACNA1HO95180 2353 aa18.9■□□□□ 0.62
CTDNEP1-211ENST00000575783 VPS13AQ96RL7 3174 aa18.89■□□□□ 0.62
CTDNEP1-211ENST00000575783 GLP2RO95838 553 aa18.89■□□□□ 0.61
CTDNEP1-211ENST00000575783 PDGFBP01127 241 aaPredicted RBP18.89■□□□□ 0.61
CTDNEP1-211ENST00000575783 ADAM17P78536 824 aa18.89■□□□□ 0.61
CTDNEP1-211ENST00000575783 PAN2Q504Q3 1202 aaKnown RBP18.89■□□□□ 0.61
CTDNEP1-211ENST00000575783 NAALADL2Q58DX5 795 aa18.89■□□□□ 0.61
CTDNEP1-211ENST00000575783 RUFY4Q6ZNE9 571 aa18.89■□□□□ 0.61
CTDNEP1-211ENST00000575783 ZBTB33Q86T24 672 aa18.89■□□□□ 0.61
CTDNEP1-211ENST00000575783 ZNF589Q86UQ0 364 aaPredicted RBP18.89■□□□□ 0.61
CTDNEP1-211ENST00000575783 IQCA1Q86XH1 822 aa18.89■□□□□ 0.61
CTDNEP1-211ENST00000575783 GPR20Q99678 358 aa18.89■□□□□ 0.61
CTDNEP1-211ENST00000575783 MAP3K20Q9NYL2 800 aaKnown RBP18.89■□□□□ 0.61
CTDNEP1-211ENST00000575783 ZNF215Q9UL58 517 aaPredicted RBP18.89■□□□□ 0.61
CTDNEP1-211ENST00000575783 PCDHA1Q9Y5I3 950 aa18.89■□□□□ 0.61
CTDNEP1-211ENST00000575783 KIAA1217Q5T5P2 1943 aa18.89■□□□□ 0.61
CTDNEP1-211ENST00000575783 NLRC5Q86WI3 1866 aa18.88■□□□□ 0.61
CTDNEP1-211ENST00000575783 PER2O15055 1255 aa18.88■□□□□ 0.61
CTDNEP1-211ENST00000575783 ICAM3P32942 547 aa18.88■□□□□ 0.61
CTDNEP1-211ENST00000575783 RBM10P98175 930 aaKnown RBP18.88■□□□□ 0.61
CTDNEP1-211ENST00000575783 SP4Q02446 784 aa18.88■□□□□ 0.61
CTDNEP1-211ENST00000575783 PTPN21Q16825 1174 aa18.88■□□□□ 0.61
CTDNEP1-211ENST00000575783 CCDC178Q5BJE1 867 aa18.88■□□□□ 0.61
CTDNEP1-211ENST00000575783 TELO2Q9Y4R8 837 aa18.88■□□□□ 0.61
CTDNEP1-211ENST00000575783 GCOM1H8Y6P7 765 aaPredicted RBP18.87■□□□□ 0.61
CTDNEP1-211ENST00000575783 PPP1R11O60927 126 aaPredicted RBP18.87■□□□□ 0.61
CTDNEP1-211ENST00000575783 POLR2MP0CAP2 368 aa18.87■□□□□ 0.61
CTDNEP1-211ENST00000575783 GHRHRQ02643 423 aa18.87■□□□□ 0.61
CTDNEP1-211ENST00000575783 NEDD9Q14511 834 aa18.87■□□□□ 0.61
CTDNEP1-211ENST00000575783 RALGAPA2Q2PPJ7 1873 aa18.87■□□□□ 0.61
CTDNEP1-211ENST00000575783 GNPTABQ3T906 1256 aa18.87■□□□□ 0.61
CTDNEP1-211ENST00000575783 METTL7BQ6UX53 244 aa18.87■□□□□ 0.61
CTDNEP1-211ENST00000575783 RSPH3Q86UC2 560 aa18.87■□□□□ 0.61
CTDNEP1-211ENST00000575783 STAG2Q8N3U4 1231 aa18.87■□□□□ 0.61
CTDNEP1-211ENST00000575783 NRCAMQ92823 1304 aa18.87■□□□□ 0.61
CTDNEP1-211ENST00000575783 ZSCAN10Q96SZ4 725 aaPredicted RBP18.87■□□□□ 0.61
CTDNEP1-211ENST00000575783 RTEL1Q9NZ71 1219 aa18.87■□□□□ 0.61
CTDNEP1-211ENST00000575783 RCAN3Q9UKA8 241 aa18.87■□□□□ 0.61
CTDNEP1-211ENST00000575783 TRPC6Q9Y210 931 aa18.87■□□□□ 0.61
CTDNEP1-211ENST00000575783 ZMYM6O95789 1325 aa18.86■□□□□ 0.61
CTDNEP1-211ENST00000575783 PROB1E7EW31 1015 aa18.86■□□□□ 0.61
CTDNEP1-211ENST00000575783 ZNF213O14771 459 aa18.86■□□□□ 0.61
CTDNEP1-211ENST00000575783 GALR2O43603 387 aaPredicted RBP18.86■□□□□ 0.61
CTDNEP1-211ENST00000575783 MGAT3Q09327 533 aa18.86■□□□□ 0.61
CTDNEP1-211ENST00000575783 NMIQ13287 307 aaPredicted RBP18.86■□□□□ 0.61
CTDNEP1-211ENST00000575783 FBXO47Q5MNV8 452 aa18.86■□□□□ 0.61
CTDNEP1-211ENST00000575783 TAF2Q6P1X5 1199 aa18.86■□□□□ 0.61
CTDNEP1-211ENST00000575783 CMTR2Q8IYT2 770 aaKnown RBP18.86■□□□□ 0.61
CTDNEP1-211ENST00000575783 RIPOR3Q96MK2 946 aa18.86■□□□□ 0.61
CTDNEP1-211ENST00000575783 CACNA1AO00555 2505 aa18.86■□□□□ 0.61
CTDNEP1-211ENST00000575783 MYH7BA7E2Y1 1941 aa18.86■□□□□ 0.61
CTDNEP1-211ENST00000575783 WDR87Q6ZQQ6 2873 aa18.85■□□□□ 0.61
CTDNEP1-211ENST00000575783 DCHS1Q96JQ0 3298 aa18.85■□□□□ 0.61
CTDNEP1-211ENST00000575783 SPATA31C2B4DYI2 1134 aa18.85■□□□□ 0.61
CTDNEP1-211ENST00000575783 ZBTB5O15062 677 aa18.85■□□□□ 0.61
CTDNEP1-211ENST00000575783 ATF7P17544 494 aaPredicted RBP18.85■□□□□ 0.61
CTDNEP1-211ENST00000575783 IBSPP21815 317 aaPredicted RBP18.85■□□□□ 0.61
CTDNEP1-211ENST00000575783 SP100P23497 879 aaPredicted RBP18.85■□□□□ 0.61
CTDNEP1-211ENST00000575783 CD52P31358 61 aa18.85■□□□□ 0.61
CTDNEP1-211ENST00000575783 RTN4RL1Q86UN2 441 aaPredicted RBP18.85■□□□□ 0.61
CTDNEP1-211ENST00000575783 ENAHQ8N8S7 591 aaPredicted RBP18.85■□□□□ 0.61
CTDNEP1-211ENST00000575783 DNAJB3Q8WWF6 145 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms