RNA–Protein interactions for RNA: ENST00000572778.5

CHMP6-204, Transcript of charged multivesicular body protein 6, humanhuman

TSL 2

Gene CHMP6, Length 737 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-204ENST00000572778 BFSP2Q13515 415 aa23.48■■□□□ 1.35
CHMP6-204ENST00000572778 KRT25Q7Z3Z0 450 aa23.48■■□□□ 1.35
CHMP6-204ENST00000572778 RETREG2Q8NC44 543 aa23.48■■□□□ 1.35
CHMP6-204ENST00000572778 GLG1Q92896 1179 aa23.48■■□□□ 1.35
CHMP6-204ENST00000572778 SCLYQ96I15 445 aa23.48■■□□□ 1.35
CHMP6-204ENST00000572778 WNT8AQ9H1J5 351 aa23.48■■□□□ 1.35
CHMP6-204ENST00000572778 RANBP2P49792 3224 aaKnown RBP23.47■■□□□ 1.35
CHMP6-204ENST00000572778 C17orf102A2RUQ5 167 aa23.47■■□□□ 1.35
CHMP6-204ENST00000572778 EDIL3O43854 480 aa23.47■■□□□ 1.35
CHMP6-204ENST00000572778 ST18O60284 1047 aa23.47■■□□□ 1.35
CHMP6-204ENST00000572778 SMIM10L2AP0DMW4 78 aa23.47■■□□□ 1.35
CHMP6-204ENST00000572778 SMIM10L2BP0DMW5 78 aa23.47■■□□□ 1.35
CHMP6-204ENST00000572778 ACRP10323 421 aa23.47■■□□□ 1.35
CHMP6-204ENST00000572778 ACTR2P61160 394 aa23.47■■□□□ 1.35
CHMP6-204ENST00000572778 NONOQ15233 471 aaKnown RBP eCLIP23.47■■□□□ 1.35
CHMP6-204ENST00000572778 CCDC155Q8N6L0 562 aa23.47■■□□□ 1.35
CHMP6-204ENST00000572778 SH2B1Q9NRF2 756 aaPredicted RBP23.47■■□□□ 1.35
CHMP6-204ENST00000572778 CCDC194A0A1B0GVG4 234 aa23.46■■□□□ 1.35
CHMP6-204ENST00000572778 SOX1O00570 391 aaPredicted RBP23.46■■□□□ 1.35
CHMP6-204ENST00000572778 MARK3P27448 753 aa23.46■■□□□ 1.35
CHMP6-204ENST00000572778 HIC1Q14526 733 aa23.46■■□□□ 1.35
CHMP6-204ENST00000572778 LRIT3Q3SXY7 679 aa23.46■■□□□ 1.35
CHMP6-204ENST00000572778 OXER1Q8TDS5 423 aa23.46■■□□□ 1.35
CHMP6-204ENST00000572778 TBC1D32Q96NH3 1257 aa23.46■■□□□ 1.35
CHMP6-204ENST00000572778 CTAGE1Q96RT6 745 aa23.46■■□□□ 1.35
CHMP6-204ENST00000572778 RNPEPQ9H4A4 650 aa23.46■■□□□ 1.35
CHMP6-204ENST00000572778 SMARCAD1Q9H4L7 1026 aa23.46■■□□□ 1.35
CHMP6-204ENST00000572778 AZI2Q9H6S1 392 aa23.46■■□□□ 1.35
CHMP6-204ENST00000572778 BRMS1Q9HCU9 246 aa23.46■■□□□ 1.35
CHMP6-204ENST00000572778 IL23AQ9NPF7 189 aa23.46■■□□□ 1.35
CHMP6-204ENST00000572778 TBC1D22BQ9NU19 505 aa23.46■■□□□ 1.35
CHMP6-204ENST00000572778 PITPNM1O00562 1244 aa23.45■■□□□ 1.34
CHMP6-204ENST00000572778 PTK7Q13308 1070 aa23.45■■□□□ 1.34
CHMP6-204ENST00000572778 TRIM29Q14134 588 aa23.45■■□□□ 1.34
CHMP6-204ENST00000572778 INF2Q27J81 1249 aa23.45■■□□□ 1.34
CHMP6-204ENST00000572778 C16orf59Q7L2K0 433 aa23.45■■□□□ 1.34
CHMP6-204ENST00000572778 CAGE1Q8TC20 777 aa23.45■■□□□ 1.34
CHMP6-204ENST00000572778 ATP6V0A1Q93050 837 aa23.45■■□□□ 1.34
CHMP6-204ENST00000572778 LENG9Q96B70 501 aa23.45■■□□□ 1.34
CHMP6-204ENST00000572778 RNPC3Q96LT9 517 aaKnown RBP23.45■■□□□ 1.34
CHMP6-204ENST00000572778 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.45■■□□□ 1.343e-7■■■■□ 20.1
CHMP6-204ENST00000572778 LLPHQ9BRT6 129 aaKnown RBP23.45■■□□□ 1.34
CHMP6-204ENST00000572778 SETD4Q9NVD3 440 aa23.45■■□□□ 1.34
CHMP6-204ENST00000572778 ERAP1Q9NZ08 941 aa23.45■■□□□ 1.34
CHMP6-204ENST00000572778 TCEAL9Q9UHQ7 104 aa23.45■■□□□ 1.34
CHMP6-204ENST00000572778 TRIOBPQ9H2D6 2365 aa23.45■■□□□ 1.34
CHMP6-204ENST00000572778 DHX15O43143 795 aaKnown RBP23.44■■□□□ 1.34
CHMP6-204ENST00000572778 CCNE2O96020 404 aa23.44■■□□□ 1.34
CHMP6-204ENST00000572778 GNAT1P11488 350 aa23.44■■□□□ 1.34
CHMP6-204ENST00000572778 KRT2P35908 639 aa23.44■■□□□ 1.34
CHMP6-204ENST00000572778 TMEM240Q5SV17 173 aa23.44■■□□□ 1.34
CHMP6-204ENST00000572778 DHX38Q92620 1227 aaKnown RBP23.44■■□□□ 1.34
CHMP6-204ENST00000572778 LRCH3Q96II8 777 aa23.44■■□□□ 1.34
CHMP6-204ENST00000572778 PCYT2Q99447 389 aa23.44■■□□□ 1.34
CHMP6-204ENST00000572778 DOCK5Q9H7D0 1870 aa23.43■■□□□ 1.34
CHMP6-204ENST00000572778 EMSYQ7Z589 1322 aa23.43■■□□□ 1.34
CHMP6-204ENST00000572778 LGR5O75473 907 aa23.43■■□□□ 1.34
CHMP6-204ENST00000572778 TDP2O95551 362 aa23.43■■□□□ 1.34
CHMP6-204ENST00000572778 IQCF3P0C7M6 154 aa23.43■■□□□ 1.34
CHMP6-204ENST00000572778 LETM2Q2VYF4 491 aa23.43■■□□□ 1.34
CHMP6-204ENST00000572778 PSRC1Q6PGN9 363 aaPredicted RBP23.43■■□□□ 1.34
CHMP6-204ENST00000572778 PIK3AP1Q6ZUJ8 805 aa23.43■■□□□ 1.34
CHMP6-204ENST00000572778 ZNF365Q70YC5 407 aa23.43■■□□□ 1.34
CHMP6-204ENST00000572778 RPUSD2Q8IZ73 545 aaKnown RBP23.43■■□□□ 1.34
CHMP6-204ENST00000572778 BACH2Q9BYV9 841 aa23.43■■□□□ 1.34
CHMP6-204ENST00000572778 BACH1O14867 736 aa23.42■■□□□ 1.34
CHMP6-204ENST00000572778 MSH4O15457 936 aa23.42■■□□□ 1.34
CHMP6-204ENST00000572778 TREHO43280 583 aa23.42■■□□□ 1.34
CHMP6-204ENST00000572778 ATG7O95352 703 aa23.42■■□□□ 1.34
CHMP6-204ENST00000572778 FGBP02675 491 aa23.42■■□□□ 1.34
CHMP6-204ENST00000572778 STAT5BP51692 787 aa23.42■■□□□ 1.34
CHMP6-204ENST00000572778 NR5A1Q13285 461 aa23.42■■□□□ 1.34
CHMP6-204ENST00000572778 Q4G0T1 1027 aa23.42■■□□□ 1.34
CHMP6-204ENST00000572778 KRT40Q6A162 431 aa23.42■■□□□ 1.34
CHMP6-204ENST00000572778 DEFB128Q7Z7B8 93 aa23.42■■□□□ 1.34
CHMP6-204ENST00000572778 AFAP1L1Q8TED9 768 aa23.42■■□□□ 1.34
CHMP6-204ENST00000572778 NRCAMQ92823 1304 aa23.41■■□□□ 1.34
CHMP6-204ENST00000572778 CYP3A7-CYP3A51PA0A087WV96 503 aa23.41■■□□□ 1.34
CHMP6-204ENST00000572778 MMP1P03956 469 aa23.41■■□□□ 1.34
CHMP6-204ENST00000572778 CKBP12277 381 aa23.41■■□□□ 1.34
CHMP6-204ENST00000572778 SELPP16109 830 aa23.41■■□□□ 1.34
CHMP6-204ENST00000572778 CYP3A7P24462 503 aa23.41■■□□□ 1.34
CHMP6-204ENST00000572778 HOXC8P31273 242 aa23.41■■□□□ 1.34
CHMP6-204ENST00000572778 PPFIA1Q13136 1202 aa23.41■■□□□ 1.34
CHMP6-204ENST00000572778 MIS18BP1Q6P0N0 1132 aa23.41■■□□□ 1.34
CHMP6-204ENST00000572778 ABHD15Q6UXT9 468 aa23.41■■□□□ 1.34
CHMP6-204ENST00000572778 NEK8Q86SG6 692 aa23.41■■□□□ 1.34
CHMP6-204ENST00000572778 SERINC5Q86VE9 423 aa23.41■■□□□ 1.34
CHMP6-204ENST00000572778 IL27Q8NEV9 243 aa23.41■■□□□ 1.34
CHMP6-204ENST00000572778 WNT8BQ93098 351 aa23.41■■□□□ 1.34
CHMP6-204ENST00000572778 GAS7O60861 476 aa23.4■■□□□ 1.34
CHMP6-204ENST00000572778 HMGN5P82970 282 aaKnown RBP23.4■■□□□ 1.34
CHMP6-204ENST00000572778 KRT76Q01546 638 aa23.4■■□□□ 1.34
CHMP6-204ENST00000572778 GUCY1B3Q02153 619 aa23.4■■□□□ 1.34
CHMP6-204ENST00000572778 EARS2Q5JPH6 523 aaKnown RBP23.4■■□□□ 1.34
CHMP6-204ENST00000572778 FAM160B1Q5W0V3 765 aa23.4■■□□□ 1.34
CHMP6-204ENST00000572778 ZNF746Q6NUN9 644 aaPredicted RBP23.4■■□□□ 1.34
CHMP6-204ENST00000572778 MOXD1Q6UVY6 613 aa23.4■■□□□ 1.34
CHMP6-204ENST00000572778 LRRC8DQ7L1W4 858 aa23.4■■□□□ 1.34
CHMP6-204ENST00000572778 PLPPR4Q7Z2D5 763 aa23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms