RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 KCNJ15Q99712 375 aa6□□□□□ -1.45
NUP88-202ENST00000570937 YIPF4Q9BSR8 244 aa6□□□□□ -1.45
NUP88-202ENST00000570937 MRPL4Q9BYD3 311 aaKnown RBP6□□□□□ -1.45
NUP88-202ENST00000570937 SLC52A2Q9HAB3 445 aa6□□□□□ -1.45
NUP88-202ENST00000570937 LUC7LQ9NQ29 371 aaKnown RBP6□□□□□ -1.45
NUP88-202ENST00000570937 SPATA6Q9NWH7 488 aaPredicted RBP6□□□□□ -1.45
NUP88-202ENST00000570937 ARAP1Q96P48 1450 aa6□□□□□ -1.45
NUP88-202ENST00000570937 SLC27A2O14975 620 aa5.99□□□□□ -1.45
NUP88-202ENST00000570937 NKRFO15226 690 aaKnown RBP eCLIP5.99□□□□□ -1.45
NUP88-202ENST00000570937 CRTAMO95727 393 aa5.99□□□□□ -1.45
NUP88-202ENST00000570937 LRG1P02750 347 aa5.99□□□□□ -1.45
NUP88-202ENST00000570937 COL6A2P12110 1019 aa5.99□□□□□ -1.45
NUP88-202ENST00000570937 STAT5AP42229 794 aa5.99□□□□□ -1.45
NUP88-202ENST00000570937 ITGA1P56199 1179 aa5.99□□□□□ -1.45
NUP88-202ENST00000570937 GUCY1A3Q02108 690 aa5.99□□□□□ -1.45
NUP88-202ENST00000570937 TEPPQ6URK8 271 aa5.99□□□□□ -1.45
NUP88-202ENST00000570937 LIPIQ6XZB0 460 aa5.99□□□□□ -1.45
NUP88-202ENST00000570937 SP8Q8IXZ3 490 aa5.99□□□□□ -1.45
NUP88-202ENST00000570937 TTLL6Q8N841 843 aa5.99□□□□□ -1.45
NUP88-202ENST00000570937 ZNF526Q8TF50 670 aaPredicted RBP5.99□□□□□ -1.45
NUP88-202ENST00000570937 CLEC4DQ8WXI8 215 aa5.99□□□□□ -1.45
NUP88-202ENST00000570937 ZBTB8AQ96BR9 441 aa5.99□□□□□ -1.45
NUP88-202ENST00000570937 DSEQ9UL01 958 aa5.99□□□□□ -1.45
NUP88-202ENST00000570937 PCDHA8Q9Y5H6 950 aa5.99□□□□□ -1.45
NUP88-202ENST00000570937 SHROOM2Q13796 1616 aa5.99□□□□□ -1.45
NUP88-202ENST00000570937 BMP7P18075 431 aa5.98□□□□□ -1.45
NUP88-202ENST00000570937 THBS2P35442 1172 aa5.98□□□□□ -1.45
NUP88-202ENST00000570937 LCE4AQ5TA78 99 aa5.98□□□□□ -1.45
NUP88-202ENST00000570937 TTLL10Q6ZVT0 673 aa5.98□□□□□ -1.45
NUP88-202ENST00000570937 C16orf59Q7L2K0 433 aa5.98□□□□□ -1.45
NUP88-202ENST00000570937 SLC7A14Q8TBB6 771 aa5.98□□□□□ -1.45
NUP88-202ENST00000570937 FBXW5Q969U6 566 aa5.98□□□□□ -1.45
NUP88-202ENST00000570937 SYT3Q9BQG1 590 aa5.98□□□□□ -1.45
NUP88-202ENST00000570937 NCOA5Q9HCD5 579 aaKnown RBP5.98□□□□□ -1.45
NUP88-202ENST00000570937 PARD6AQ9NPB6 346 aa5.98□□□□□ -1.45
NUP88-202ENST00000570937 PCDHA9Q9Y5H5 950 aa5.98□□□□□ -1.45
NUP88-202ENST00000570937 PRXQ9BXM0 1461 aa5.97□□□□□ -1.45
NUP88-202ENST00000570937 TCRBV5S4A2TA0A5A2 114 aa5.97□□□□□ -1.45
NUP88-202ENST00000570937 PLD2O14939 933 aa5.97□□□□□ -1.45
NUP88-202ENST00000570937 SMARCA5O60264 1052 aaPredicted RBP5.97□□□□□ -1.45
NUP88-202ENST00000570937 RPL13P26373 211 aaKnown RBP5.97□□□□□ -1.45
NUP88-202ENST00000570937 SLURP1P55000 103 aa5.97□□□□□ -1.45
NUP88-202ENST00000570937 ADAM9Q13443 819 aa5.97□□□□□ -1.45
NUP88-202ENST00000570937 TUSC3Q13454 348 aa5.97□□□□□ -1.45
NUP88-202ENST00000570937 SQSTM1Q13501 440 aa5.97□□□□□ -1.45
NUP88-202ENST00000570937 GPR19Q15760 415 aa5.97□□□□□ -1.45
NUP88-202ENST00000570937 PRR31Q5SQ13 230 aa5.97□□□□□ -1.45
NUP88-202ENST00000570937 TTLL7Q6ZT98 887 aa5.97□□□□□ -1.45
NUP88-202ENST00000570937 KCTD1Q719H9 257 aa5.97□□□□□ -1.45
NUP88-202ENST00000570937 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.97□□□□□ -1.45
NUP88-202ENST00000570937 CARFQ8N187 725 aa5.97□□□□□ -1.45
NUP88-202ENST00000570937 SH3RF2Q8TEC5 729 aa5.97□□□□□ -1.45
NUP88-202ENST00000570937 PIF1Q9H611 641 aa5.97□□□□□ -1.45
NUP88-202ENST00000570937 NTMQ9P121 344 aa5.97□□□□□ -1.45
NUP88-202ENST00000570937 NDOR1Q9UHB4 597 aa5.97□□□□□ -1.45
NUP88-202ENST00000570937 SFMBT1Q9UHJ3 866 aa5.97□□□□□ -1.45
NUP88-202ENST00000570937 TELO2Q9Y4R8 837 aa5.97□□□□□ -1.45
NUP88-202ENST00000570937 PTPRGP23470 1445 aa5.97□□□□□ -1.45
NUP88-202ENST00000570937 IQGAP2Q13576 1575 aa5.97□□□□□ -1.45
NUP88-202ENST00000570937 TNIKQ9UKE5 1360 aa5.96□□□□□ -1.45
NUP88-202ENST00000570937 GSTA4O15217 222 aa5.96□□□□□ -1.46
NUP88-202ENST00000570937 SASH1O94885 1247 aa5.96□□□□□ -1.46
NUP88-202ENST00000570937 INHBBP09529 407 aa5.96□□□□□ -1.46
NUP88-202ENST00000570937 FAHP16930 419 aa5.96□□□□□ -1.46
NUP88-202ENST00000570937 SMAD4Q13485 552 aaKnown RBP5.96□□□□□ -1.46
NUP88-202ENST00000570937 PAN2Q504Q3 1202 aaKnown RBP5.96□□□□□ -1.46
NUP88-202ENST00000570937 FAM47CQ5HY64 1035 aa5.96□□□□□ -1.46
NUP88-202ENST00000570937 PROSER1Q86XN7 944 aa5.96□□□□□ -1.46
NUP88-202ENST00000570937 ADGRG2Q8IZP9 1017 aa5.96□□□□□ -1.46
NUP88-202ENST00000570937 NLGN4XQ8N0W4 816 aa5.96□□□□□ -1.46
NUP88-202ENST00000570937 SH3TC2Q8TF17 1288 aa5.96□□□□□ -1.46
NUP88-202ENST00000570937 SCLYQ96I15 445 aa5.96□□□□□ -1.46
NUP88-202ENST00000570937 MAGEB10Q96LZ2 347 aaPredicted RBP5.96□□□□□ -1.46
NUP88-202ENST00000570937 XYLT2Q9H1B5 865 aa5.96□□□□□ -1.46
NUP88-202ENST00000570937 ZCCHC4Q9H5U6 513 aa5.96□□□□□ -1.46
NUP88-202ENST00000570937 TRIM39Q9HCM9 518 aa5.96□□□□□ -1.46
NUP88-202ENST00000570937 TMEM260Q9NX78 707 aa5.96□□□□□ -1.46
NUP88-202ENST00000570937 CBLCQ9ULV8 474 aa5.96□□□□□ -1.46
NUP88-202ENST00000570937 WASF3Q9UPY6 502 aa5.96□□□□□ -1.46
NUP88-202ENST00000570937 TTBK1Q5TCY1 1321 aaPredicted RBP5.96□□□□□ -1.46
NUP88-202ENST00000570937 GOLGA3Q08378 1498 aa5.96□□□□□ -1.46
NUP88-202ENST00000570937 A0A1B0GTL3 188 aa5.95□□□□□ -1.46
NUP88-202ENST00000570937 LTFP02788 710 aa5.95□□□□□ -1.46
NUP88-202ENST00000570937 AMY2AP04746 511 aa5.95□□□□□ -1.46
NUP88-202ENST00000570937 CKMP06732 381 aa5.95□□□□□ -1.46
NUP88-202ENST00000570937 PYGMP11217 842 aa5.95□□□□□ -1.46
NUP88-202ENST00000570937 AMY2BP19961 511 aa5.95□□□□□ -1.46
NUP88-202ENST00000570937 KCNC1P48547 511 aa5.95□□□□□ -1.46
NUP88-202ENST00000570937 SARSP49591 514 aaKnown RBP5.95□□□□□ -1.46
NUP88-202ENST00000570937 LACTBP83111 547 aaPredicted RBP5.95□□□□□ -1.46
NUP88-202ENST00000570937 FNDC3BQ53EP0 1204 aaKnown RBP5.95□□□□□ -1.46
NUP88-202ENST00000570937 ARHGAP36Q6ZRI8 547 aa5.95□□□□□ -1.46
NUP88-202ENST00000570937 ZC3H7AQ8IWR0 971 aaKnown RBP5.95□□□□□ -1.46
NUP88-202ENST00000570937 RBM12BQ8IXT5 1001 aaKnown RBP5.95□□□□□ -1.46
NUP88-202ENST00000570937 TMEM209Q96SK2 561 aa5.95□□□□□ -1.46
NUP88-202ENST00000570937 KANSL2Q9H9L4 492 aa5.95□□□□□ -1.46
NUP88-202ENST00000570937 CATSPERZQ9NTU4 200 aa5.95□□□□□ -1.46
NUP88-202ENST00000570937 SRPK3Q9UPE1 567 aa5.95□□□□□ -1.46
NUP88-202ENST00000570937 ERCC6L2Q5T890 1561 aa5.94□□□□□ -1.46
NUP88-202ENST00000570937 TCRBV16S1A1N1A0A5B0 115 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms