RNA–Protein interactions for RNA: ENST00000569990.2

HCCAT5-201, hepatocellular carcinoma associated transcript 5, humanhuman

TSL 1 (best) BASIC

Gene HCCAT5, Length 1,079 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCCAT5-201ENST00000569990 TDP2O95551 362 aa10.89□□□□□ -0.67
HCCAT5-201ENST00000569990 CD4P01730 458 aa10.89□□□□□ -0.67
HCCAT5-201ENST00000569990 LGALS2P05162 132 aa10.89□□□□□ -0.67
HCCAT5-201ENST00000569990 CLTBP09497 229 aa10.89□□□□□ -0.67
HCCAT5-201ENST00000569990 SYN1P17600 705 aa10.89□□□□□ -0.67
HCCAT5-201ENST00000569990 CYP3A7P24462 503 aa10.89□□□□□ -0.67
HCCAT5-201ENST00000569990 GUCY1B3Q02153 619 aa10.89□□□□□ -0.67
HCCAT5-201ENST00000569990 SP4Q02446 784 aa10.89□□□□□ -0.67
HCCAT5-201ENST00000569990 FAAP100Q0VG06 881 aa10.89□□□□□ -0.67
HCCAT5-201ENST00000569990 INF2Q27J81 1249 aa10.89□□□□□ -0.67
HCCAT5-201ENST00000569990 EARS2Q5JPH6 523 aaKnown RBP10.89□□□□□ -0.67
HCCAT5-201ENST00000569990 NFRKBQ6P4R8 1299 aa10.89□□□□□ -0.67
HCCAT5-201ENST00000569990 MOXD1Q6UVY6 613 aa10.89□□□□□ -0.67
HCCAT5-201ENST00000569990 PIK3AP1Q6ZUJ8 805 aa10.89□□□□□ -0.67
HCCAT5-201ENST00000569990 DIS3L2Q8IYB7 885 aaKnown RBP10.89□□□□□ -0.67
HCCAT5-201ENST00000569990 PPP1R13LQ8WUF5 828 aa10.89□□□□□ -0.67
HCCAT5-201ENST00000569990 C8orf76Q96K31 380 aa10.89□□□□□ -0.67
HCCAT5-201ENST00000569990 MBOAT7Q96N66 472 aa10.89□□□□□ -0.67
HCCAT5-201ENST00000569990 SDF4Q9BRK5 362 aa10.89□□□□□ -0.67
HCCAT5-201ENST00000569990 C16orf70Q9BSU1 422 aa10.89□□□□□ -0.67
HCCAT5-201ENST00000569990 KATNAL1Q9BW62 490 aa10.89□□□□□ -0.67
HCCAT5-201ENST00000569990 BRMS1Q9HCU9 246 aa10.89□□□□□ -0.67
HCCAT5-201ENST00000569990 JPH1Q9HDC5 661 aaPredicted RBP10.89□□□□□ -0.67
HCCAT5-201ENST00000569990 PDLIM7Q9NR12 457 aa10.89□□□□□ -0.67
HCCAT5-201ENST00000569990 DOCK5Q9H7D0 1870 aa10.89□□□□□ -0.67
HCCAT5-201ENST00000569990 CEP290O15078 2479 aa10.89□□□□□ -0.67
HCCAT5-201ENST00000569990 GSTTP1A0A1W2PQM5 241 aa10.88□□□□□ -0.67
HCCAT5-201ENST00000569990 FAM205CA6NFA0 338 aa10.88□□□□□ -0.67
HCCAT5-201ENST00000569990 DHX15O43143 795 aaKnown RBP10.88□□□□□ -0.67
HCCAT5-201ENST00000569990 B4GALT4O60513 344 aa10.88□□□□□ -0.67
HCCAT5-201ENST00000569990 TCF7P36402 384 aaPredicted RBP10.88□□□□□ -0.67
HCCAT5-201ENST00000569990 PSEN2P49810 448 aa10.88□□□□□ -0.67
HCCAT5-201ENST00000569990 CHMP4BP1P59074 171 aa10.88□□□□□ -0.67
HCCAT5-201ENST00000569990 PTPN11Q06124 597 aaPredicted RBP10.88□□□□□ -0.67
HCCAT5-201ENST00000569990 CUL4AQ13619 759 aa10.88□□□□□ -0.67
HCCAT5-201ENST00000569990 MFSD10Q14728 455 aa10.88□□□□□ -0.67
HCCAT5-201ENST00000569990 KIAA0753Q2KHM9 967 aa10.88□□□□□ -0.67
HCCAT5-201ENST00000569990 FAM47CQ5HY64 1035 aa10.88□□□□□ -0.67
HCCAT5-201ENST00000569990 SH3RF1Q7Z6J0 888 aa10.88□□□□□ -0.67
HCCAT5-201ENST00000569990 NEK8Q86SG6 692 aa10.88□□□□□ -0.67
HCCAT5-201ENST00000569990 SESTD1Q86VW0 696 aa10.88□□□□□ -0.67
HCCAT5-201ENST00000569990 TRIM50Q86XT4 487 aa10.88□□□□□ -0.67
HCCAT5-201ENST00000569990 FBXO18Q8NFZ0 1043 aa10.88□□□□□ -0.67
HCCAT5-201ENST00000569990 SEPT1Q8WYJ6 367 aa10.88□□□□□ -0.67
HCCAT5-201ENST00000569990 ZNF577Q9BSK1 485 aa10.88□□□□□ -0.67
HCCAT5-201ENST00000569990 PRDM5Q9NQX1 630 aaPredicted RBP10.88□□□□□ -0.67
HCCAT5-201ENST00000569990 SLC9A2Q9UBY0 812 aa10.88□□□□□ -0.67
HCCAT5-201ENST00000569990 TBX21Q9UL17 535 aa10.88□□□□□ -0.67
HCCAT5-201ENST00000569990 TRIM43BA6NCK2 446 aa10.87□□□□□ -0.67
HCCAT5-201ENST00000569990 H3BRB1 525 aa10.87□□□□□ -0.67
HCCAT5-201ENST00000569990 KIAA0355O15063 1070 aa10.87□□□□□ -0.67
HCCAT5-201ENST00000569990 TLR3O15455 904 aaKnown RBP10.87□□□□□ -0.67
HCCAT5-201ENST00000569990 MSH4O15457 936 aa10.87□□□□□ -0.67
HCCAT5-201ENST00000569990 CCNE2O96020 404 aa10.87□□□□□ -0.67
HCCAT5-201ENST00000569990 GCFC2P16383 781 aaKnown RBP10.87□□□□□ -0.67
HCCAT5-201ENST00000569990 ACTR2P61160 394 aa10.87□□□□□ -0.67
HCCAT5-201ENST00000569990 SAFBQ15424 915 aaKnown RBP eCLIP10.87□□□□□ -0.67
HCCAT5-201ENST00000569990 LETM2Q2VYF4 491 aa10.87□□□□□ -0.67
HCCAT5-201ENST00000569990 Q4G0T1 1027 aa10.87□□□□□ -0.67
HCCAT5-201ENST00000569990 UTP14CQ5TAP6 766 aaKnown RBP10.87□□□□□ -0.67
HCCAT5-201ENST00000569990 PPP4R3AQ6IN85 833 aa10.87□□□□□ -0.67
HCCAT5-201ENST00000569990 TRIM43Q96BQ3 446 aaPredicted RBP10.87□□□□□ -0.67
HCCAT5-201ENST00000569990 UIMC1Q96RL1 719 aa10.87□□□□□ -0.67
HCCAT5-201ENST00000569990 TRPV6Q9H1D0 765 aa10.87□□□□□ -0.67
HCCAT5-201ENST00000569990 TUT1Q9H6E5 874 aaKnown RBP10.87□□□□□ -0.67
HCCAT5-201ENST00000569990 TBC1D22BQ9NU19 505 aa10.87□□□□□ -0.67
HCCAT5-201ENST00000569990 TMEM39AQ9NV64 488 aa10.87□□□□□ -0.67
HCCAT5-201ENST00000569990 PRKAG2Q9UGJ0 569 aa10.87□□□□□ -0.67
HCCAT5-201ENST00000569990 DDX25Q9UHL0 483 aaKnown RBP10.87□□□□□ -0.67
HCCAT5-201ENST00000569990 PCDHB8Q9UN66 801 aa10.87□□□□□ -0.67
HCCAT5-201ENST00000569990 KIF3AQ9Y496 699 aa10.87□□□□□ -0.67
HCCAT5-201ENST00000569990 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.87□□□□□ -0.67
HCCAT5-201ENST00000569990 EMSYQ7Z589 1322 aa10.86□□□□□ -0.67
HCCAT5-201ENST00000569990 DDX39AO00148 427 aaKnown RBP10.86□□□□□ -0.67
HCCAT5-201ENST00000569990 SLC37A4O43826 429 aa10.86□□□□□ -0.67
HCCAT5-201ENST00000569990 LGR5O75473 907 aa10.86□□□□□ -0.67
HCCAT5-201ENST00000569990 ATG7O95352 703 aa10.86□□□□□ -0.67
HCCAT5-201ENST00000569990 ITGB8P26012 769 aa10.86□□□□□ -0.67
HCCAT5-201ENST00000569990 GJB2P29033 226 aa10.86□□□□□ -0.67
HCCAT5-201ENST00000569990 GDF6Q6KF10 455 aaPredicted RBP10.86□□□□□ -0.67
HCCAT5-201ENST00000569990 C7orf31Q8N865 590 aa10.86□□□□□ -0.67
HCCAT5-201ENST00000569990 ETNPPLQ8TBG4 499 aa10.86□□□□□ -0.67
HCCAT5-201ENST00000569990 SLC5A5Q92911 643 aa10.86□□□□□ -0.67
HCCAT5-201ENST00000569990 PCYT2Q99447 389 aa10.86□□□□□ -0.67
HCCAT5-201ENST00000569990 RIT2Q99578 217 aa10.86□□□□□ -0.67
HCCAT5-201ENST00000569990 NAP1L4Q99733 375 aaKnown RBP10.86□□□□□ -0.67
HCCAT5-201ENST00000569990 GDF15Q99988 308 aa10.86□□□□□ -0.67
HCCAT5-201ENST00000569990 FOXP1Q9H334 677 aaPredicted RBP10.86□□□□□ -0.67
HCCAT5-201ENST00000569990 TRMT13Q9NUP7 481 aaKnown RBP10.86□□□□□ -0.67
HCCAT5-201ENST00000569990 HDAC6Q9UBN7 1215 aa10.86□□□□□ -0.67
HCCAT5-201ENST00000569990 GTF2IRD1Q9UHL9 959 aa10.86□□□□□ -0.67
HCCAT5-201ENST00000569990 ZNF215Q9UL58 517 aaPredicted RBP10.86□□□□□ -0.67
HCCAT5-201ENST00000569990 SMC3Q9UQE7 1217 aa10.86□□□□□ -0.67
HCCAT5-201ENST00000569990 IGKV6D-21A0A0A0MT36 114 aa10.85□□□□□ -0.67
HCCAT5-201ENST00000569990 K7ELQ4 463 aaPredicted RBP10.85□□□□□ -0.67
HCCAT5-201ENST00000569990 CCNT1O60563 726 aaKnown RBP10.85□□□□□ -0.67
HCCAT5-201ENST00000569990 GAS7O60861 476 aa10.85□□□□□ -0.67
HCCAT5-201ENST00000569990 PSMD10O75832 226 aa10.85□□□□□ -0.67
HCCAT5-201ENST00000569990 SUPT20HL2P0C7V6 817 aa10.85□□□□□ -0.67
HCCAT5-201ENST00000569990 RAG1P15918 1043 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms