RNA–Protein interactions for RNA: ENST00000569827.5

CAPN3-220, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-220ENST00000569827 TROAPQ12815 778 aa13.94□□□□□ -0.18
CAPN3-220ENST00000569827 TRDNQ13061 729 aa13.94□□□□□ -0.18
CAPN3-220ENST00000569827 COL9A3Q14050 684 aaPredicted RBP13.94□□□□□ -0.18
CAPN3-220ENST00000569827 WTAPQ15007 396 aa13.94□□□□□ -0.18
CAPN3-220ENST00000569827 GNPTABQ3T906 1256 aa13.94□□□□□ -0.18
CAPN3-220ENST00000569827 TIGD5Q53EQ6 642 aa13.94□□□□□ -0.18
CAPN3-220ENST00000569827 METTL7BQ6UX53 244 aa13.94□□□□□ -0.18
CAPN3-220ENST00000569827 CMTR1Q8N1G2 835 aaKnown RBP13.94□□□□□ -0.18
CAPN3-220ENST00000569827 NEK9Q8TD19 979 aa13.94□□□□□ -0.18
CAPN3-220ENST00000569827 INPP4AQ96PE3 977 aaPredicted RBP13.94□□□□□ -0.18
CAPN3-220ENST00000569827 MAP3K20Q9NYL2 800 aaKnown RBP13.94□□□□□ -0.18
CAPN3-220ENST00000569827 hCG_1642624A0A1W2PR95 340 aa13.93□□□□□ -0.18
CAPN3-220ENST00000569827 E7EWF7 191 aa13.93□□□□□ -0.18
CAPN3-220ENST00000569827 GRM6O15303 877 aa13.93□□□□□ -0.18
CAPN3-220ENST00000569827 FIBPO43427 364 aa13.93□□□□□ -0.18
CAPN3-220ENST00000569827 RXRAP19793 462 aa13.93□□□□□ -0.18
CAPN3-220ENST00000569827 IBSPP21815 317 aaPredicted RBP13.93□□□□□ -0.18
CAPN3-220ENST00000569827 ICAM3P32942 547 aa13.93□□□□□ -0.18
CAPN3-220ENST00000569827 NT5C2P49902 561 aa13.93□□□□□ -0.18
CAPN3-220ENST00000569827 DLX2Q07687 328 aaPredicted RBP13.93□□□□□ -0.18
CAPN3-220ENST00000569827 PTPROQ16827 1216 aa13.93□□□□□ -0.18
CAPN3-220ENST00000569827 RALYLQ86SE5 291 aaKnown RBP13.93□□□□□ -0.18
CAPN3-220ENST00000569827 RPAINQ86UA6 219 aa13.93□□□□□ -0.18
CAPN3-220ENST00000569827 SMARCC2Q8TAQ2 1214 aa13.93□□□□□ -0.18
CAPN3-220ENST00000569827 USP26Q9BXU7 913 aa13.93□□□□□ -0.18
CAPN3-220ENST00000569827 NSUN3Q9H649 340 aaKnown RBP13.93□□□□□ -0.18
CAPN3-220ENST00000569827 ERICH2A1L162 156 aa13.92□□□□□ -0.18
CAPN3-220ENST00000569827 ATP9AO75110 1047 aa13.92□□□□□ -0.18
CAPN3-220ENST00000569827 PLEKHA8P1O95397 391 aa13.92□□□□□ -0.18
CAPN3-220ENST00000569827 LINC00271P0C7V0 271 aa13.92□□□□□ -0.18
CAPN3-220ENST00000569827 TCF7P36402 384 aaPredicted RBP13.92□□□□□ -0.18
CAPN3-220ENST00000569827 LTBRP36941 435 aa13.92□□□□□ -0.18
CAPN3-220ENST00000569827 IGBP1P78318 339 aa13.92□□□□□ -0.18
CAPN3-220ENST00000569827 ADAM17P78536 824 aa13.92□□□□□ -0.18
CAPN3-220ENST00000569827 NEDD9Q14511 834 aa13.92□□□□□ -0.18
CAPN3-220ENST00000569827 UBE2SQ16763 222 aa13.92□□□□□ -0.18
CAPN3-220ENST00000569827 TTC22Q5TAA0 569 aa13.92□□□□□ -0.18
CAPN3-220ENST00000569827 PABPC5Q96DU9 382 aaKnown RBP13.92□□□□□ -0.18
CAPN3-220ENST00000569827 SAMD11Q96NU1 681 aa13.92□□□□□ -0.18
CAPN3-220ENST00000569827 ZNF215Q9UL58 517 aaPredicted RBP13.92□□□□□ -0.18
CAPN3-220ENST00000569827 MEIS2O14770 477 aa13.91□□□□□ -0.18
CAPN3-220ENST00000569827 LINC01565O15544 149 aa13.91□□□□□ -0.18
CAPN3-220ENST00000569827 ZP2Q05996 745 aa13.91□□□□□ -0.18
CAPN3-220ENST00000569827 TMEM62Q0P6H9 643 aa13.91□□□□□ -0.18
CAPN3-220ENST00000569827 PPFIA1Q13136 1202 aa13.91□□□□□ -0.18
CAPN3-220ENST00000569827 LPIN1Q14693 890 aa13.91□□□□□ -0.18
CAPN3-220ENST00000569827 ALYREFQ86V81 257 aaKnown RBP13.91□□□□□ -0.18
CAPN3-220ENST00000569827 ZNF654Q8IZM8 581 aa13.91□□□□□ -0.18
CAPN3-220ENST00000569827 FIBCD1Q8N539 461 aa13.91□□□□□ -0.18
CAPN3-220ENST00000569827 SAMD3Q8N6K7 520 aa13.91□□□□□ -0.18
CAPN3-220ENST00000569827 NCOA7Q8NI08 942 aa13.91□□□□□ -0.18
CAPN3-220ENST00000569827 DNAJB3Q8WWF6 145 aa13.91□□□□□ -0.18
CAPN3-220ENST00000569827 LINC01599Q8WXQ3 324 aa13.91□□□□□ -0.18
CAPN3-220ENST00000569827 IGFLR1Q9H665 355 aa13.91□□□□□ -0.18
CAPN3-220ENST00000569827 ADGRA3Q8IWK6 1321 aa13.9□□□□□ -0.18
CAPN3-220ENST00000569827 ZDBF2Q9HCK1 2354 aa13.9□□□□□ -0.18
CAPN3-220ENST00000569827 PRR33A8MZF0 331 aa13.9□□□□□ -0.18
CAPN3-220ENST00000569827 TBX10O75333 385 aa13.9□□□□□ -0.18
CAPN3-220ENST00000569827 GNAT1P11488 350 aa13.9□□□□□ -0.18
CAPN3-220ENST00000569827 CHMLP26374 656 aa13.9□□□□□ -0.18
CAPN3-220ENST00000569827 GATMP50440 423 aa13.9□□□□□ -0.18
CAPN3-220ENST00000569827 MGAT3Q09327 533 aa13.9□□□□□ -0.18
CAPN3-220ENST00000569827 HYAL1Q12794 435 aa13.9□□□□□ -0.18
CAPN3-220ENST00000569827 GRIK4Q16099 956 aa13.9□□□□□ -0.18
CAPN3-220ENST00000569827 PAN2Q504Q3 1202 aaKnown RBP13.9□□□□□ -0.18
CAPN3-220ENST00000569827 FAM26DQ5JW98 314 aa13.9□□□□□ -0.18
CAPN3-220ENST00000569827 PCNX4Q63HM2 1172 aa13.9□□□□□ -0.18
CAPN3-220ENST00000569827 CATIPQ7Z7H3 387 aa13.9□□□□□ -0.18
CAPN3-220ENST00000569827 MB21D2Q8IYB1 491 aaPredicted RBP13.9□□□□□ -0.18
CAPN3-220ENST00000569827 IGDCC4Q8TDY8 1250 aa13.9□□□□□ -0.18
CAPN3-220ENST00000569827 IL17RAQ96F46 866 aa13.9□□□□□ -0.18
CAPN3-220ENST00000569827 FAM49AQ9H0Q0 323 aaPredicted RBP13.9□□□□□ -0.18
CAPN3-220ENST00000569827 LY9Q9HBG7 655 aa13.9□□□□□ -0.18
CAPN3-220ENST00000569827 ALG13Q9NP73 1137 aaKnown RBP13.9□□□□□ -0.18
CAPN3-220ENST00000569827 CDY2AQ9Y6F7 541 aa13.9□□□□□ -0.18
CAPN3-220ENST00000569827 U3KPZ7 1027 aaPredicted RBP13.9□□□□□ -0.18
CAPN3-220ENST00000569827 KMT2EQ8IZD2 1858 aa13.9□□□□□ -0.18
CAPN3-220ENST00000569827 MYO10Q9HD67 2058 aa13.89□□□□□ -0.19
CAPN3-220ENST00000569827 GSTTP1A0A1W2PQM5 241 aa13.89□□□□□ -0.19
CAPN3-220ENST00000569827 POTEB3A0JP26 581 aa13.89□□□□□ -0.19
CAPN3-220ENST00000569827 DCXO43602 365 aa13.89□□□□□ -0.19
CAPN3-220ENST00000569827 CAND2O75155 1236 aa13.89□□□□□ -0.19
CAPN3-220ENST00000569827 KCNA2P16389 499 aa13.89□□□□□ -0.19
CAPN3-220ENST00000569827 CD52P31358 61 aa13.89□□□□□ -0.19
CAPN3-220ENST00000569827 IRS1P35568 1242 aa13.89□□□□□ -0.19
CAPN3-220ENST00000569827 CSPP1Q1MSJ5 1256 aa13.89□□□□□ -0.19
CAPN3-220ENST00000569827 POTEBQ6S5H4 581 aa13.89□□□□□ -0.19
CAPN3-220ENST00000569827 CCDC82Q8N4S0 544 aa13.89□□□□□ -0.19
CAPN3-220ENST00000569827 TRAPPC12Q8WVT3 735 aa13.89□□□□□ -0.19
CAPN3-220ENST00000569827 APBB2Q92870 758 aa13.89□□□□□ -0.19
CAPN3-220ENST00000569827 CUL5Q93034 780 aa13.89□□□□□ -0.19
CAPN3-220ENST00000569827 RRP36Q96EU6 259 aaKnown RBP13.89□□□□□ -0.19
CAPN3-220ENST00000569827 AGO3Q9H9G7 860 aaKnown RBP13.89□□□□□ -0.19
CAPN3-220ENST00000569827 RC3H2Q9HBD1 1191 aaKnown RBP13.89□□□□□ -0.19
CAPN3-220ENST00000569827 TUBE1Q9UJT0 475 aa13.89□□□□□ -0.19
CAPN3-220ENST00000569827 PCDHGC5Q9Y5F6 944 aa13.89□□□□□ -0.19
CAPN3-220ENST00000569827 NRCAMQ92823 1304 aa13.89□□□□□ -0.19
CAPN3-220ENST00000569827 ENPP3O14638 875 aa13.88□□□□□ -0.19
CAPN3-220ENST00000569827 STAM2O75886 525 aa13.88□□□□□ -0.19
CAPN3-220ENST00000569827 ITGB5P18084 799 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms