RNA–Protein interactions for RNA: ENST00000569128.1

CDH11-216, Transcript of cadherin 11, humanhuman

TSL 3

Gene CDH11, Length 781 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-216ENST00000569128 TMEM192Q8IY95 271 aa9.7□□□□□ -0.86
CDH11-216ENST00000569128 TTLL11Q8NHH1 800 aa9.7□□□□□ -0.86
CDH11-216ENST00000569128 SSH3Q8TE77 659 aa9.7□□□□□ -0.86
CDH11-216ENST00000569128 SLC6A18Q96N87 628 aa9.7□□□□□ -0.86
CDH11-216ENST00000569128 NYXQ9GZU5 481 aa9.7□□□□□ -0.86
CDH11-216ENST00000569128 MAPK8IP1Q9UQF2 711 aa9.7□□□□□ -0.86
CDH11-216ENST00000569128 DDX60Q8IY21 1712 aaKnown RBP9.7□□□□□ -0.86
CDH11-216ENST00000569128 LOC102724159A0A0B4J2E5 919 aa9.69□□□□□ -0.86
CDH11-216ENST00000569128 NPHP1O15259 732 aa9.69□□□□□ -0.86
CDH11-216ENST00000569128 LEFTY1O75610 366 aa9.69□□□□□ -0.86
CDH11-216ENST00000569128 CCNFP41002 786 aa9.69□□□□□ -0.86
CDH11-216ENST00000569128 MASP1P48740 699 aa9.69□□□□□ -0.86
CDH11-216ENST00000569128 MTX1Q13505 466 aa9.69□□□□□ -0.86
CDH11-216ENST00000569128 HDAC1Q13547 482 aaPredicted RBP9.69□□□□□ -0.86
CDH11-216ENST00000569128 PWP2Q15269 919 aaKnown RBP9.69□□□□□ -0.86
CDH11-216ENST00000569128 PRR23CQ6ZRP0 262 aa9.69□□□□□ -0.86
CDH11-216ENST00000569128 CASZ1Q86V15 1759 aa9.69□□□□□ -0.86
CDH11-216ENST00000569128 CNBD1Q8NA66 436 aa9.69□□□□□ -0.86
CDH11-216ENST00000569128 KDM2BQ8NHM5 1336 aa9.69□□□□□ -0.86
CDH11-216ENST00000569128 DNAJB8Q8NHS0 232 aa9.69□□□□□ -0.86
CDH11-216ENST00000569128 RWDD1Q9H446 243 aaPredicted RBP9.69□□□□□ -0.86
CDH11-216ENST00000569128 GREM2Q9H772 168 aa9.69□□□□□ -0.86
CDH11-216ENST00000569128 CEP131Q9UPN4 1083 aa9.69□□□□□ -0.86
CDH11-216ENST00000569128 COL4A1P02462 1669 aa9.68□□□□□ -0.86
CDH11-216ENST00000569128 CCDC194A0A1B0GVG4 234 aa9.68□□□□□ -0.86
CDH11-216ENST00000569128 B2RBV5 119 aa9.68□□□□□ -0.86
CDH11-216ENST00000569128 TPD52L2O43399 206 aaKnown RBP9.68□□□□□ -0.86
CDH11-216ENST00000569128 DDAH1O94760 285 aa9.68□□□□□ -0.86
CDH11-216ENST00000569128 ADMP35318 185 aa9.68□□□□□ -0.86
CDH11-216ENST00000569128 SQSTM1Q13501 440 aa9.68□□□□□ -0.86
CDH11-216ENST00000569128 C2orf27AQ580R0 203 aa9.68□□□□□ -0.86
CDH11-216ENST00000569128 C6orf15Q6UXA7 325 aaPredicted RBP9.68□□□□□ -0.86
CDH11-216ENST00000569128 SLC51AQ86UW1 340 aa9.68□□□□□ -0.86
CDH11-216ENST00000569128 TBC1D32Q96NH3 1257 aa9.68□□□□□ -0.86
CDH11-216ENST00000569128 DUSP23Q9BVJ7 150 aa9.68□□□□□ -0.86
CDH11-216ENST00000569128 PUS3Q9BZE2 481 aaKnown RBP9.68□□□□□ -0.86
CDH11-216ENST00000569128 FAM86C1Q9NVL1 165 aa9.68□□□□□ -0.86
CDH11-216ENST00000569128 MAGEC2Q9UBF1 373 aaPredicted RBP9.68□□□□□ -0.86
CDH11-216ENST00000569128 G3BP2Q9UN86 482 aaKnown RBP9.68□□□□□ -0.86
CDH11-216ENST00000569128 HDAC5Q9UQL6 1122 aa9.68□□□□□ -0.86
CDH11-216ENST00000569128 EXOC6BQ9Y2D4 811 aa9.68□□□□□ -0.86
CDH11-216ENST00000569128 TNRC6CQ9HCJ0 1690 aaKnown RBP9.67□□□□□ -0.86
CDH11-216ENST00000569128 RBAK-RBAKDNI3L0D1 243 aa9.67□□□□□ -0.86
CDH11-216ENST00000569128 CLEC3AO75596 197 aa9.67□□□□□ -0.86
CDH11-216ENST00000569128 SURF6O75683 361 aaKnown RBP9.67□□□□□ -0.86
CDH11-216ENST00000569128 GJB6O95452 261 aa9.67□□□□□ -0.86
CDH11-216ENST00000569128 VIL1P09327 827 aaKnown RBP9.67□□□□□ -0.86
CDH11-216ENST00000569128 FAM87AP0C7U9 286 aa9.67□□□□□ -0.86
CDH11-216ENST00000569128 ST5P78524 1137 aa9.67□□□□□ -0.86
CDH11-216ENST00000569128 DOC2BQ14184 412 aa9.67□□□□□ -0.86
CDH11-216ENST00000569128 SF3B3Q15393 1217 aaKnown RBP9.67□□□□□ -0.86
CDH11-216ENST00000569128 VHLLQ6RSH7 139 aa9.67□□□□□ -0.86
CDH11-216ENST00000569128 SHISA5Q8N114 240 aa9.67□□□□□ -0.86
CDH11-216ENST00000569128 GATA6Q92908 595 aa9.67□□□□□ -0.86
CDH11-216ENST00000569128 DHRS1Q96LJ7 313 aa9.67□□□□□ -0.86
CDH11-216ENST00000569128 MFSD14AQ96MC6 490 aa9.67□□□□□ -0.86
CDH11-216ENST00000569128 SIL1Q9H173 461 aa9.67□□□□□ -0.86
CDH11-216ENST00000569128 DCTPP1Q9H773 170 aa9.67□□□□□ -0.86
CDH11-216ENST00000569128 ZNF214Q9UL59 606 aaPredicted RBP9.67□□□□□ -0.86
CDH11-216ENST00000569128 TAF1P21675 1872 aa9.66□□□□□ -0.86
CDH11-216ENST00000569128 LAMB2P55268 1798 aa9.66□□□□□ -0.86
CDH11-216ENST00000569128 NRXN2Q9P2S2 1712 aa9.66□□□□□ -0.86
CDH11-216ENST00000569128 HMMRO75330 724 aa9.66□□□□□ -0.86
CDH11-216ENST00000569128 GNPTABQ3T906 1256 aa9.66□□□□□ -0.86
CDH11-216ENST00000569128 LRRC24Q50LG9 513 aa9.66□□□□□ -0.86
CDH11-216ENST00000569128 TDRD10Q5VZ19 366 aaKnown RBP9.66□□□□□ -0.86
CDH11-216ENST00000569128 ZAR1Q86SH2 424 aa9.66□□□□□ -0.86
CDH11-216ENST00000569128 FAM178BQ8IXR5 827 aa9.66□□□□□ -0.86
CDH11-216ENST00000569128 SMC5Q8IY18 1101 aa9.66□□□□□ -0.86
CDH11-216ENST00000569128 FBXL6Q8N531 539 aa9.66□□□□□ -0.86
CDH11-216ENST00000569128 JMYQ8N9B5 988 aa9.66□□□□□ -0.86
CDH11-216ENST00000569128 GIMAP7Q8NHV1 300 aa9.66□□□□□ -0.86
CDH11-216ENST00000569128 THAP3Q8WTV1 239 aaPredicted RBP9.66□□□□□ -0.86
CDH11-216ENST00000569128 ZNF512BQ96KM6 892 aaPredicted RBP9.66□□□□□ -0.86
CDH11-216ENST00000569128 MTFR1LQ9H019 292 aa9.66□□□□□ -0.86
CDH11-216ENST00000569128 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.66□□□□□ -0.86
CDH11-216ENST00000569128 SUCOQ9UBS9 1254 aaKnown RBP9.66□□□□□ -0.86
CDH11-216ENST00000569128 TPX2Q9ULW0 747 aaKnown RBP9.66□□□□□ -0.86
CDH11-216ENST00000569128 LEMD3Q9Y2U8 911 aa9.66□□□□□ -0.86
CDH11-216ENST00000569128 ANKRD31Q8N7Z5 1873 aa9.66□□□□□ -0.86
CDH11-216ENST00000569128 ANKRD18BA2A2Z9 1011 aa9.65□□□□□ -0.86
CDH11-216ENST00000569128 SASH1O94885 1247 aa9.65□□□□□ -0.86
CDH11-216ENST00000569128 EOMESO95936 686 aa9.65□□□□□ -0.86
CDH11-216ENST00000569128 TP53P04637 393 aaPredicted RBP9.65□□□□□ -0.86
CDH11-216ENST00000569128 PMS1P54277 932 aaKnown RBP9.65□□□□□ -0.86
CDH11-216ENST00000569128 IFIT5Q13325 482 aaKnown RBP9.65□□□□□ -0.86
CDH11-216ENST00000569128 CCDC57Q2TAC2 916 aa9.65□□□□□ -0.86
CDH11-216ENST00000569128 CCDC152Q4G0S7 254 aa9.65□□□□□ -0.86
CDH11-216ENST00000569128 ANKRD45Q5TZF3 282 aa9.65□□□□□ -0.86
CDH11-216ENST00000569128 CENPQQ7L2Z9 268 aaPredicted RBP9.65□□□□□ -0.86
CDH11-216ENST00000569128 PPFIBP1Q86W92 1011 aa9.65□□□□□ -0.86
CDH11-216ENST00000569128 SYNPOQ8N3V7 929 aa9.65□□□□□ -0.86
CDH11-216ENST00000569128 CELF1Q92879 486 aaKnown RBP9.65□□□□□ -0.86
CDH11-216ENST00000569128 KREMEN1Q96MU8 473 aa9.65□□□□□ -0.86
CDH11-216ENST00000569128 BRIP1Q9BX63 1249 aa9.65□□□□□ -0.86
CDH11-216ENST00000569128 MYH3P11055 1940 aa9.64□□□□□ -0.87
CDH11-216ENST00000569128 KLRG2A4D1S0 409 aaPredicted RBP9.64□□□□□ -0.87
CDH11-216ENST00000569128 C9IYK1 514 aa9.64□□□□□ -0.87
CDH11-216ENST00000569128 MAP4K4O95819 1239 aaPredicted RBP9.64□□□□□ -0.87
CDH11-216ENST00000569128 CHRNA5P30532 468 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms