RNA–Protein interactions for RNA: ENST00000568740.5

TCF4-241, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 2,628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-241ENST00000568740 RSPH9Q9H1X1 276 aaPredicted RBP9.57□□□□□ -0.88
TCF4-241ENST00000568740 VPS33BQ9H267 617 aa9.57□□□□□ -0.88
TCF4-241ENST00000568740 AVENQ9NQS1 362 aaPredicted RBP9.57□□□□□ -0.88
TCF4-241ENST00000568740 TBC1D7Q9P0N9 293 aa9.57□□□□□ -0.88
TCF4-241ENST00000568740 PUF60Q9UHX1 559 aaKnown RBP9.57□□□□□ -0.88
TCF4-241ENST00000568740 CTNND2Q9UQB3 1225 aa9.57□□□□□ -0.88
TCF4-241ENST00000568740 ZKSCAN5Q9Y2L8 839 aa9.57□□□□□ -0.88
TCF4-241ENST00000568740 NPHP3-ACAD11A0A0J9YXS1 232 aa9.57□□□□□ -0.88
TCF4-241ENST00000568740 ESYT2A0FGR8 921 aa9.57□□□□□ -0.88
TCF4-241ENST00000568740 RBAK-RBAKDNI3L0D1 243 aa9.57□□□□□ -0.88
TCF4-241ENST00000568740 DDX39AO00148 427 aaKnown RBP9.57□□□□□ -0.88
TCF4-241ENST00000568740 ZBTB39O15060 712 aa9.57□□□□□ -0.88
TCF4-241ENST00000568740 FOSP01100 380 aaPredicted RBP9.57□□□□□ -0.88
TCF4-241ENST00000568740 ZNF76P36508 570 aa9.57□□□□□ -0.88
TCF4-241ENST00000568740 NT5C2P49902 561 aa9.57□□□□□ -0.88
TCF4-241ENST00000568740 TNFAIP1Q13829 316 aa9.57□□□□□ -0.88
TCF4-241ENST00000568740 TMC6Q7Z403 805 aa9.57□□□□□ -0.88
TCF4-241ENST00000568740 SH3RF1Q7Z6J0 888 aa9.57□□□□□ -0.88
TCF4-241ENST00000568740 MCF2L2Q86YR7 1114 aa9.57□□□□□ -0.88
TCF4-241ENST00000568740 SNX29Q8TEQ0 813 aa9.57□□□□□ -0.88
TCF4-241ENST00000568740 CACTINQ8WUQ7 758 aaKnown RBP9.57□□□□□ -0.88
TCF4-241ENST00000568740 ZHX3Q9H4I2 956 aa9.57□□□□□ -0.88
TCF4-241ENST00000568740 PCDHA12Q9UN75 941 aa9.57□□□□□ -0.88
TCF4-241ENST00000568740 DYTNA2CJ06 578 aa9.56□□□□□ -0.88
TCF4-241ENST00000568740 E9PMD0 336 aa9.56□□□□□ -0.88
TCF4-241ENST00000568740 ENPP3O14638 875 aa9.56□□□□□ -0.88
TCF4-241ENST00000568740 NKRFO15226 690 aaKnown RBP eCLIP9.56□□□□□ -0.88
TCF4-241ENST00000568740 IDEP14735 1019 aa9.56□□□□□ -0.88
TCF4-241ENST00000568740 PMS1P54277 932 aaKnown RBP9.56□□□□□ -0.88
TCF4-241ENST00000568740 MYL5Q02045 173 aa9.56□□□□□ -0.88
TCF4-241ENST00000568740 ARID5AQ03989 594 aa9.56□□□□□ -0.88
TCF4-241ENST00000568740 DMTNQ08495 405 aa9.56□□□□□ -0.88
TCF4-241ENST00000568740 GRB10Q13322 594 aa9.56□□□□□ -0.88
TCF4-241ENST00000568740 MUM1L1Q5H9M0 696 aa9.56□□□□□ -0.88
TCF4-241ENST00000568740 RNF34Q969K3 372 aa9.56□□□□□ -0.88
TCF4-241ENST00000568740 HOOK2Q96ED9 719 aa9.56□□□□□ -0.88
TCF4-241ENST00000568740 RNPC3Q96LT9 517 aaKnown RBP9.56□□□□□ -0.88
TCF4-241ENST00000568740 SH2D3AQ9BRG2 576 aa9.56□□□□□ -0.88
TCF4-241ENST00000568740 HOOK1Q9UJC3 728 aaKnown RBP9.56□□□□□ -0.88
TCF4-241ENST00000568740 CCPG1Q9ULG6 757 aa9.56□□□□□ -0.88
TCF4-241ENST00000568740 RIPK3Q9Y572 518 aa9.56□□□□□ -0.88
TCF4-241ENST00000568740 FER1L6Q2WGJ9 1857 aa9.56□□□□□ -0.88
TCF4-241ENST00000568740 POTEB3A0JP26 581 aa9.56□□□□□ -0.88
TCF4-241ENST00000568740 POTECB2RU33 542 aa9.56□□□□□ -0.88
TCF4-241ENST00000568740 IFRD1O00458 451 aaPredicted RBP9.56□□□□□ -0.88
TCF4-241ENST00000568740 RPN1P04843 607 aaKnown RBP9.56□□□□□ -0.88
TCF4-241ENST00000568740 VCAM1P19320 739 aa9.56□□□□□ -0.88
TCF4-241ENST00000568740 RPS12P25398 132 aaKnown RBP9.56□□□□□ -0.88
TCF4-241ENST00000568740 PSMC6P62333 389 aa9.56□□□□□ -0.88
TCF4-241ENST00000568740 LRRC41Q15345 812 aa9.56□□□□□ -0.88
TCF4-241ENST00000568740 KMT5BQ4FZB7 885 aa9.56□□□□□ -0.88
TCF4-241ENST00000568740 FKBP1CQ5VVH2 108 aa9.56□□□□□ -0.88
TCF4-241ENST00000568740 POTEBQ6S5H4 581 aa9.56□□□□□ -0.88
TCF4-241ENST00000568740 PNMA5Q96PV4 448 aa9.56□□□□□ -0.88
TCF4-241ENST00000568740 RPAP3Q9H6T3 665 aaPredicted RBP9.56□□□□□ -0.88
TCF4-241ENST00000568740 SLC39A2Q9NP94 309 aa9.56□□□□□ -0.88
TCF4-241ENST00000568740 COL20A1Q9P218 1284 aa9.56□□□□□ -0.88
TCF4-241ENST00000568740 PCDHGB7Q9Y5F8 929 aa9.56□□□□□ -0.88
TCF4-241ENST00000568740 PIK3CDO00329 1044 aa9.55□□□□□ -0.88
TCF4-241ENST00000568740 POTEIP0CG38 1075 aa9.55□□□□□ -0.88
TCF4-241ENST00000568740 POTEJP0CG39 1038 aa9.55□□□□□ -0.88
TCF4-241ENST00000568740 PRCPP42785 496 aa9.55□□□□□ -0.88
TCF4-241ENST00000568740 UBASH3AP57075 661 aa9.55□□□□□ -0.88
TCF4-241ENST00000568740 ASIC1P78348 528 aa9.55□□□□□ -0.88
TCF4-241ENST00000568740 POU5F1BQ06416 359 aa9.55□□□□□ -0.88
TCF4-241ENST00000568740 PLS1Q14651 629 aa9.55□□□□□ -0.88
TCF4-241ENST00000568740 NCAPH2Q6IBW4 605 aa9.55□□□□□ -0.88
TCF4-241ENST00000568740 ATG4CQ96DT6 458 aa9.55□□□□□ -0.88
TCF4-241ENST00000568740 CDK5RAP3Q96JB5 506 aa9.55□□□□□ -0.88
TCF4-241ENST00000568740 CCDC94Q9BW85 323 aaPredicted RBP9.55□□□□□ -0.88
TCF4-241ENST00000568740 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.55□□□□□ -0.88
TCF4-241ENST00000568740 RGL1Q9NZL6 768 aa9.55□□□□□ -0.88
TCF4-241ENST00000568740 INTUQ9ULD6 942 aa9.55□□□□□ -0.88
TCF4-241ENST00000568740 KIAA1024Q9UPX6 916 aa9.55□□□□□ -0.88
TCF4-241ENST00000568740 CEP350Q5VT06 3117 aa9.55□□□□□ -0.88
TCF4-241ENST00000568740 POTEFA5A3E0 1075 aa9.55□□□□□ -0.88
TCF4-241ENST00000568740 CCT6AP40227 531 aaKnown RBP9.55□□□□□ -0.88
TCF4-241ENST00000568740 STK4Q13043 487 aa9.55□□□□□ -0.88
TCF4-241ENST00000568740 GPR162Q16538 588 aa9.55□□□□□ -0.88
TCF4-241ENST00000568740 POTEGQ6S5H5 508 aa9.55□□□□□ -0.88
TCF4-241ENST00000568740 POTEEQ6S8J3 1075 aa9.55□□□□□ -0.88
TCF4-241ENST00000568740 NSMFQ6X4W1 530 aa9.55□□□□□ -0.88
TCF4-241ENST00000568740 GPC2Q8N158 579 aa9.55□□□□□ -0.88
TCF4-241ENST00000568740 IGSF22Q8N9C0 903 aa9.55□□□□□ -0.88
TCF4-241ENST00000568740 IL31RAQ8NI17 732 aa9.55□□□□□ -0.88
TCF4-241ENST00000568740 SPATA20Q8TB22 786 aa9.55□□□□□ -0.88
TCF4-241ENST00000568740 CPLX3Q8WVH0 158 aa9.55□□□□□ -0.88
TCF4-241ENST00000568740 CLMNQ96JQ2 1002 aa9.55□□□□□ -0.88
TCF4-241ENST00000568740 BLOC1S4Q9NUP1 217 aa9.55□□□□□ -0.88
TCF4-241ENST00000568740 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.55□□□□□ -0.88
TCF4-241ENST00000568740 POLR2AP24928 1970 aaKnown RBP9.54□□□□□ -0.88
TCF4-241ENST00000568740 TEX33O43247 280 aa9.54□□□□□ -0.88
TCF4-241ENST00000568740 PTPRAP18433 802 aa9.54□□□□□ -0.88
TCF4-241ENST00000568740 MTMR3Q13615 1198 aa9.54□□□□□ -0.88
TCF4-241ENST00000568740 KCTD2Q14681 263 aa9.54□□□□□ -0.88
TCF4-241ENST00000568740 NT5DC1Q5TFE4 455 aa9.54□□□□□ -0.88
TCF4-241ENST00000568740 KANK3Q6NY19 840 aa9.54□□□□□ -0.88
TCF4-241ENST00000568740 BTNL9Q6UXG8 535 aa9.54□□□□□ -0.88
TCF4-241ENST00000568740 PAF1Q8N7H5 531 aa9.54□□□□□ -0.88
TCF4-241ENST00000568740 CHURC1Q8WUH1 139 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms