RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-209ENST00000567635 CCT2P78371 535 aaKnown RBP7.9□□□□□ -1.14
SF3B3-209ENST00000567635 TOB2Q14106 344 aaPredicted RBP7.9□□□□□ -1.14
SF3B3-209ENST00000567635 HIC1Q14526 733 aa7.9□□□□□ -1.14
SF3B3-209ENST00000567635 GPNMBQ14956 572 aa7.9□□□□□ -1.14
SF3B3-209ENST00000567635 GRIN2CQ14957 1233 aa7.9□□□□□ -1.14
SF3B3-209ENST00000567635 PKN1Q16512 942 aa7.9□□□□□ -1.14
SF3B3-209ENST00000567635 TRIM71Q2Q1W2 868 aaKnown RBP7.9□□□□□ -1.14
SF3B3-209ENST00000567635 CEP55Q53EZ4 464 aa7.9□□□□□ -1.14
SF3B3-209ENST00000567635 ZNF618Q5T7W0 954 aa7.9□□□□□ -1.14
SF3B3-209ENST00000567635 CYP2W1Q8TAV3 490 aa7.9□□□□□ -1.14
SF3B3-209ENST00000567635 PHOSPHO2Q8TCD6 241 aa7.9□□□□□ -1.14
SF3B3-209ENST00000567635 CCDC12Q8WUD4 166 aaPredicted RBP7.9□□□□□ -1.14
SF3B3-209ENST00000567635 MYLIPQ8WY64 445 aa7.9□□□□□ -1.14
SF3B3-209ENST00000567635 ZNF274Q96GC6 653 aaPredicted RBP7.9□□□□□ -1.14
SF3B3-209ENST00000567635 ZMYND12Q9H0C1 365 aa7.9□□□□□ -1.14
SF3B3-209ENST00000567635 SLC28A3Q9HAS3 691 aa7.9□□□□□ -1.14
SF3B3-209ENST00000567635 C6orf50Q9HD87 102 aa7.9□□□□□ -1.14
SF3B3-209ENST00000567635 KCNH7Q9NS40 1196 aa7.9□□□□□ -1.14
SF3B3-209ENST00000567635 SETD4Q9NVD3 440 aa7.9□□□□□ -1.14
SF3B3-209ENST00000567635 TMEM260Q9NX78 707 aa7.9□□□□□ -1.14
SF3B3-209ENST00000567635 TELO2Q9Y4R8 837 aa7.9□□□□□ -1.14
SF3B3-209ENST00000567635 PCDHA11Q9Y5I1 949 aa7.9□□□□□ -1.14
SF3B3-209ENST00000567635 NCOR1O75376 2440 aa7.9□□□□□ -1.15
SF3B3-209ENST00000567635 NID2Q14112 1375 aa7.89□□□□□ -1.15
SF3B3-209ENST00000567635 MYO7AQ13402 2215 aa7.89□□□□□ -1.15
SF3B3-209ENST00000567635 NRCAMQ92823 1304 aa7.89□□□□□ -1.15
SF3B3-209ENST00000567635 ESYT2A0FGR8 921 aa7.89□□□□□ -1.15
SF3B3-209ENST00000567635 KIF28PB7ZC32 967 aa7.89□□□□□ -1.15
SF3B3-209ENST00000567635 TREHO43280 583 aa7.89□□□□□ -1.15
SF3B3-209ENST00000567635 NBNO60934 754 aa7.89□□□□□ -1.15
SF3B3-209ENST00000567635 BAIAP3O94812 1187 aa7.89□□□□□ -1.15
SF3B3-209ENST00000567635 CXCL10P02778 98 aa7.89□□□□□ -1.15
SF3B3-209ENST00000567635 ARP10275 920 aa7.89□□□□□ -1.15
SF3B3-209ENST00000567635 IFNAR1P17181 557 aa7.89□□□□□ -1.15
SF3B3-209ENST00000567635 GNA11P29992 359 aa7.89□□□□□ -1.15
SF3B3-209ENST00000567635 HOXC8P31273 242 aa7.89□□□□□ -1.15
SF3B3-209ENST00000567635 SREBF1P36956 1147 aa7.89□□□□□ -1.15
SF3B3-209ENST00000567635 THPOP40225 353 aa7.89□□□□□ -1.15
SF3B3-209ENST00000567635 ARHGAP4P98171 946 aa7.89□□□□□ -1.15
SF3B3-209ENST00000567635 SSRP1Q08945 709 aaKnown RBP7.89□□□□□ -1.15
SF3B3-209ENST00000567635 AP3B2Q13367 1082 aa7.89□□□□□ -1.15
SF3B3-209ENST00000567635 IKBKEQ14164 716 aa7.89□□□□□ -1.15
SF3B3-209ENST00000567635 NTRK3Q16288 839 aa7.89□□□□□ -1.15
SF3B3-209ENST00000567635 JAKMIP3Q5VZ66 844 aa7.89□□□□□ -1.15
SF3B3-209ENST00000567635 CNKSR3Q6P9H4 555 aa7.89□□□□□ -1.15
SF3B3-209ENST00000567635 NIPA1Q7RTP0 329 aa7.89□□□□□ -1.15
SF3B3-209ENST00000567635 TRIM50Q86XT4 487 aa7.89□□□□□ -1.15
SF3B3-209ENST00000567635 BICD2Q8TD16 824 aa7.89□□□□□ -1.15
SF3B3-209ENST00000567635 GLG1Q92896 1179 aa7.89□□□□□ -1.15
SF3B3-209ENST00000567635 WNT8BQ93098 351 aa7.89□□□□□ -1.15
SF3B3-209ENST00000567635 PHKBQ93100 1093 aa7.89□□□□□ -1.15
SF3B3-209ENST00000567635 PGBD1Q96JS3 809 aa7.89□□□□□ -1.15
SF3B3-209ENST00000567635 SLC9A7Q96T83 725 aa7.89□□□□□ -1.15
SF3B3-209ENST00000567635 SDF4Q9BRK5 362 aa7.89□□□□□ -1.15
SF3B3-209ENST00000567635 SLC26A6Q9BXS9 759 aa7.89□□□□□ -1.15
SF3B3-209ENST00000567635 RNF26Q9BY78 433 aaPredicted RBP7.89□□□□□ -1.15
SF3B3-209ENST00000567635 ANO3Q9BYT9 981 aa7.89□□□□□ -1.15
SF3B3-209ENST00000567635 NKX2-4Q9H2Z4 354 aa7.89□□□□□ -1.15
SF3B3-209ENST00000567635 SMARCAD1Q9H4L7 1026 aa7.89□□□□□ -1.15
SF3B3-209ENST00000567635 NCOA5Q9HCD5 579 aaKnown RBP7.89□□□□□ -1.15
SF3B3-209ENST00000567635 PDRG1Q9NUG6 133 aa7.89□□□□□ -1.15
SF3B3-209ENST00000567635 ERAP1Q9NZ08 941 aa7.89□□□□□ -1.15
SF3B3-209ENST00000567635 PKD2L1Q9P0L9 805 aa7.89□□□□□ -1.15
SF3B3-209ENST00000567635 SLC9A2Q9UBY0 812 aa7.89□□□□□ -1.15
SF3B3-209ENST00000567635 YBX2Q9Y2T7 364 aaKnown RBP7.89□□□□□ -1.15
SF3B3-209ENST00000567635 CUL9Q8IWT3 2517 aa7.89□□□□□ -1.15
SF3B3-209ENST00000567635 COL6A3P12111 3177 aa7.89□□□□□ -1.15
SF3B3-209ENST00000567635 NFASCO94856 1347 aa7.88□□□□□ -1.15
SF3B3-209ENST00000567635 EMSYQ7Z589 1322 aa7.88□□□□□ -1.15
SF3B3-209ENST00000567635 BRWD1Q9NSI6 2320 aa7.88□□□□□ -1.15
SF3B3-209ENST00000567635 ABHD14A-ACY1A0A1B0GW23 586 aa7.88□□□□□ -1.15
SF3B3-209ENST00000567635 RRN3P2A6NIE6 340 aa7.88□□□□□ -1.15
SF3B3-209ENST00000567635 RSPH10B2B2RC85 870 aa7.88□□□□□ -1.15
SF3B3-209ENST00000567635 CPLX1O14810 134 aa7.88□□□□□ -1.15
SF3B3-209ENST00000567635 EFCAB14O75071 495 aa7.88□□□□□ -1.15
SF3B3-209ENST00000567635 CAND2O75155 1236 aa7.88□□□□□ -1.15
SF3B3-209ENST00000567635 LGR5O75473 907 aa7.88□□□□□ -1.15
SF3B3-209ENST00000567635 CYP3A4P08684 503 aa7.88□□□□□ -1.15
SF3B3-209ENST00000567635 RSPH10BP0C881 870 aa7.88□□□□□ -1.15
SF3B3-209ENST00000567635 MYOGP15173 224 aa7.88□□□□□ -1.15
SF3B3-209ENST00000567635 FOSL2P15408 326 aa7.88□□□□□ -1.15
SF3B3-209ENST00000567635 KCNJ6P48051 423 aa7.88□□□□□ -1.15
SF3B3-209ENST00000567635 ADAM17P78536 824 aa7.88□□□□□ -1.15
SF3B3-209ENST00000567635 TRAF7Q6Q0C0 670 aa7.88□□□□□ -1.15
SF3B3-209ENST00000567635 PLA2G4DQ86XP0 818 aa7.88□□□□□ -1.15
SF3B3-209ENST00000567635 HERC6Q8IVU3 1022 aa7.88□□□□□ -1.15
SF3B3-209ENST00000567635 TRIM22Q8IYM9 498 aa7.88□□□□□ -1.15
SF3B3-209ENST00000567635 REXO1Q8N1G1 1221 aaKnown RBP7.88□□□□□ -1.15
SF3B3-209ENST00000567635 MAFAQ8NHW3 353 aaPredicted RBP7.88□□□□□ -1.15
SF3B3-209ENST00000567635 TNPO1Q92973 898 aaKnown RBP7.88□□□□□ -1.15
SF3B3-209ENST00000567635 GAS2L1Q99501 681 aaPredicted RBP7.88□□□□□ -1.15
SF3B3-209ENST00000567635 LARP6Q9BRS8 491 aaKnown RBP7.88□□□□□ -1.15
SF3B3-209ENST00000567635 UPF3BQ9BZI7 483 aaKnown RBP7.88□□□□□ -1.15
SF3B3-209ENST00000567635 AZI2Q9H6S1 392 aa7.88□□□□□ -1.15
SF3B3-209ENST00000567635 AGO4Q9HCK5 861 aaKnown RBP7.88□□□□□ -1.15
SF3B3-209ENST00000567635 JPH1Q9HDC5 661 aaPredicted RBP7.88□□□□□ -1.15
SF3B3-209ENST00000567635 SH3GLB2Q9NR46 395 aa7.88□□□□□ -1.15
SF3B3-209ENST00000567635 DAXXQ9UER7 740 aaPredicted RBP7.88□□□□□ -1.15
SF3B3-209ENST00000567635 TTC3P53804 2025 aa7.88□□□□□ -1.15
SF3B3-209ENST00000567635 ADAMTS3O15072 1205 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms