RNA–Protein interactions for RNA: ENST00000566827.5

CDH11-212, Transcript of cadherin 11, humanhuman

TSL 2 BASIC

Gene CDH11, Length 2,395 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-212ENST00000566827 CCDC62Q6P9F0 684 aa12.43□□□□□ -0.42
CDH11-212ENST00000566827 SH3RF1Q7Z6J0 888 aa12.43□□□□□ -0.42
CDH11-212ENST00000566827 RPUSD2Q8IZ73 545 aaKnown RBP12.43□□□□□ -0.42
CDH11-212ENST00000566827 PRR7Q8TB68 274 aa12.43□□□□□ -0.42
CDH11-212ENST00000566827 AFG1LQ8WV93 481 aa12.43□□□□□ -0.42
CDH11-212ENST00000566827 DPF3Q92784 378 aa12.43□□□□□ -0.42
CDH11-212ENST00000566827 CUL5Q93034 780 aa12.43□□□□□ -0.42
CDH11-212ENST00000566827 UPF2Q9HAU5 1272 aaKnown RBP12.43□□□□□ -0.42
CDH11-212ENST00000566827 FAM184BQ9ULE4 1060 aa12.43□□□□□ -0.42
CDH11-212ENST00000566827 UBA1P22314 1058 aaKnown RBP12.42□□□□□ -0.42
CDH11-212ENST00000566827 SMARCA1P28370 1054 aa12.42□□□□□ -0.42
CDH11-212ENST00000566827 NLRP5P59047 1200 aa12.42□□□□□ -0.42
CDH11-212ENST00000566827 STXBP2Q15833 593 aa12.42□□□□□ -0.42
CDH11-212ENST00000566827 PLEKHG6Q3KR16 790 aa12.42□□□□□ -0.42
CDH11-212ENST00000566827 TSHZ1Q6ZSZ6 1077 aa12.42□□□□□ -0.42
CDH11-212ENST00000566827 CYFIP1Q7L576 1253 aa12.42□□□□□ -0.42
CDH11-212ENST00000566827 DNERQ8NFT8 737 aa12.42□□□□□ -0.42
CDH11-212ENST00000566827 ALG1Q9BT22 464 aa12.42□□□□□ -0.42
CDH11-212ENST00000566827 ANO3Q9BYT9 981 aa12.42□□□□□ -0.42
CDH11-212ENST00000566827 RIC8AQ9NPQ8 531 aa12.42□□□□□ -0.42
CDH11-212ENST00000566827 MRVI1Q9Y6F6 885 aa12.42□□□□□ -0.42
CDH11-212ENST00000566827 GRIN2DO15399 1336 aa12.42□□□□□ -0.42
CDH11-212ENST00000566827 SPDYE3A6NKU9 549 aa12.42□□□□□ -0.42
CDH11-212ENST00000566827 ITGB8P26012 769 aa12.42□□□□□ -0.42
CDH11-212ENST00000566827 ZMYND12Q9H0C1 365 aa12.42□□□□□ -0.42
CDH11-212ENST00000566827 IRF2BPLQ9H1B7 796 aa12.42□□□□□ -0.42
CDH11-212ENST00000566827 A0A1W2PQ45 241 aaPredicted RBP12.41□□□□□ -0.42
CDH11-212ENST00000566827 A0A1W2PQY0 241 aa12.41□□□□□ -0.42
CDH11-212ENST00000566827 BTBD18B2RXH4 712 aa12.41□□□□□ -0.42
CDH11-212ENST00000566827 TDP2O95551 362 aa12.41□□□□□ -0.42
CDH11-212ENST00000566827 ATP2B1P20020 1258 aa12.41□□□□□ -0.42
CDH11-212ENST00000566827 PPP2R5BQ15173 497 aa12.41□□□□□ -0.42
CDH11-212ENST00000566827 CCSAPQ6IQ19 270 aaPredicted RBP12.41□□□□□ -0.42
CDH11-212ENST00000566827 NT5DC4Q86YG4 428 aa12.41□□□□□ -0.42
CDH11-212ENST00000566827 TRIM22Q8IYM9 498 aa12.41□□□□□ -0.42
CDH11-212ENST00000566827 C7orf61Q8IZ16 206 aa12.41□□□□□ -0.42
CDH11-212ENST00000566827 DDX41Q9UJV9 622 aaKnown RBP12.41□□□□□ -0.42
CDH11-212ENST00000566827 COL4A3BPQ9Y5P4 624 aa12.41□□□□□ -0.42
CDH11-212ENST00000566827 PQBP1O60828 265 aaKnown RBP12.41□□□□□ -0.42
CDH11-212ENST00000566827 EIF3JO75822 258 aaKnown RBP12.41□□□□□ -0.42
CDH11-212ENST00000566827 GGPS1O95749 300 aa12.41□□□□□ -0.42
CDH11-212ENST00000566827 COL6A1P12109 1028 aa12.41□□□□□ -0.42
CDH11-212ENST00000566827 ACLYP53396 1101 aa12.41□□□□□ -0.42
CDH11-212ENST00000566827 ARHGAP1Q07960 439 aa12.41□□□□□ -0.42
CDH11-212ENST00000566827 FSCN1Q16658 493 aaKnown RBP12.41□□□□□ -0.42
CDH11-212ENST00000566827 INF2Q27J81 1249 aa12.41□□□□□ -0.42
CDH11-212ENST00000566827 TRIM60Q495X7 471 aa12.41□□□□□ -0.42
CDH11-212ENST00000566827 DUSP28Q4G0W2 176 aa12.41□□□□□ -0.42
CDH11-212ENST00000566827 REXO1Q8N1G1 1221 aaKnown RBP12.41□□□□□ -0.42
CDH11-212ENST00000566827 ATP11BQ9Y2G3 1177 aa12.41□□□□□ -0.42
CDH11-212ENST00000566827 PIK3CDO00329 1044 aa12.4□□□□□ -0.42
CDH11-212ENST00000566827 DUSP11O75319 330 aaKnown RBP12.4□□□□□ -0.42
CDH11-212ENST00000566827 AP1G2O75843 785 aa12.4□□□□□ -0.42
CDH11-212ENST00000566827 KIF4AO95239 1232 aa12.4□□□□□ -0.42
CDH11-212ENST00000566827 DEXIO95424 95 aa12.4□□□□□ -0.42
CDH11-212ENST00000566827 HSP90AA1P07900 732 aaKnown RBP12.4□□□□□ -0.42
CDH11-212ENST00000566827 RCAN1P53805 252 aa12.4□□□□□ -0.42
CDH11-212ENST00000566827 GHRHRQ02643 423 aa12.4□□□□□ -0.42
CDH11-212ENST00000566827 BMS1Q14692 1282 aaKnown RBP12.4□□□□□ -0.42
CDH11-212ENST00000566827 RABEP1Q15276 862 aa12.4□□□□□ -0.42
CDH11-212ENST00000566827 KRBA2Q6ZNG9 492 aa12.4□□□□□ -0.42
CDH11-212ENST00000566827 TRMT44Q8IYL2 757 aaKnown RBP12.4□□□□□ -0.42
CDH11-212ENST00000566827 TET1Q8NFU7 2136 aa12.4□□□□□ -0.42
CDH11-212ENST00000566827 OR6J1Q8NGC5 347 aa12.4□□□□□ -0.42
CDH11-212ENST00000566827 ALDH8A1Q9H2A2 487 aaPredicted RBP12.4□□□□□ -0.42
CDH11-212ENST00000566827 KIF28PB7ZC32 967 aa12.4□□□□□ -0.43
CDH11-212ENST00000566827 H0YGN5 161 aa12.4□□□□□ -0.43
CDH11-212ENST00000566827 RGS19P49795 217 aa12.4□□□□□ -0.43
CDH11-212ENST00000566827 ARHGAP4P98171 946 aa12.4□□□□□ -0.43
CDH11-212ENST00000566827 ANKRD1Q15327 319 aa12.4□□□□□ -0.43
CDH11-212ENST00000566827 PIK3AP1Q6ZUJ8 805 aa12.4□□□□□ -0.43
CDH11-212ENST00000566827 KCNH7Q9NS40 1196 aa12.4□□□□□ -0.43
CDH11-212ENST00000566827 UMODL1Q5DID0 1318 aa12.39□□□□□ -0.43
CDH11-212ENST00000566827 HOXA2O43364 376 aa12.39□□□□□ -0.43
CDH11-212ENST00000566827 MYL3P08590 195 aa12.39□□□□□ -0.43
CDH11-212ENST00000566827 ZNF200P98182 395 aaPredicted RBP12.39□□□□□ -0.43
CDH11-212ENST00000566827 ITGB3BPQ13352 177 aaPredicted RBP12.39□□□□□ -0.43
CDH11-212ENST00000566827 PRR16Q569H4 304 aa12.39□□□□□ -0.43
CDH11-212ENST00000566827 NECAB2Q7Z6G3 386 aa12.39□□□□□ -0.43
CDH11-212ENST00000566827 C11orf96Q7Z7L8 435 aa12.39□□□□□ -0.43
CDH11-212ENST00000566827 KLHDC9Q8NEP7 349 aa12.39□□□□□ -0.43
CDH11-212ENST00000566827 TBCKQ8TEA7 893 aa12.39□□□□□ -0.43
CDH11-212ENST00000566827 SCFD2Q8WU76 684 aa12.39□□□□□ -0.43
CDH11-212ENST00000566827 INPP4AQ96PE3 977 aaPredicted RBP12.39□□□□□ -0.43
CDH11-212ENST00000566827 SH2D3AQ9BRG2 576 aa12.39□□□□□ -0.43
CDH11-212ENST00000566827 C11orf49Q9H6J7 331 aa12.39□□□□□ -0.43
CDH11-212ENST00000566827 VTA1Q9NP79 307 aa12.39□□□□□ -0.43
CDH11-212ENST00000566827 MRPL42Q9Y6G3 142 aaKnown RBP12.39□□□□□ -0.43
CDH11-212ENST00000566827 TRANK1O15050 2925 aa12.39□□□□□ -0.43
CDH11-212ENST00000566827 M0R2N6 131 aa12.38□□□□□ -0.43
CDH11-212ENST00000566827 DNM1LO00429 736 aa12.38□□□□□ -0.43
CDH11-212ENST00000566827 SLC37A4O43826 429 aa12.38□□□□□ -0.43
CDH11-212ENST00000566827 MARK3P27448 753 aa12.38□□□□□ -0.43
CDH11-212ENST00000566827 CCND2P30279 289 aa12.38□□□□□ -0.43
CDH11-212ENST00000566827 MRPL12P52815 198 aaKnown RBP12.38□□□□□ -0.43
CDH11-212ENST00000566827 TBX4P57082 545 aa12.38□□□□□ -0.43
CDH11-212ENST00000566827 CSPP1Q1MSJ5 1256 aa12.38□□□□□ -0.43
CDH11-212ENST00000566827 MAMSTRQ6ZN01 415 aa12.38□□□□□ -0.43
CDH11-212ENST00000566827 PHF20Q9BVI0 1012 aa12.38□□□□□ -0.43
CDH11-212ENST00000566827 TRPV6Q9H1D0 765 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms