RNA–Protein interactions for RNA: ENST00000565834.1

COMMD4-213, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,671 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-213ENST00000565834 DYDC2Q96IM9 177 aa20.99■□□□□ 0.95
COMMD4-213ENST00000565834 MAML3Q96JK9 1138 aa20.99■□□□□ 0.95
COMMD4-213ENST00000565834 MTRQ99707 1265 aa20.99■□□□□ 0.95
COMMD4-213ENST00000565834 HSD17B14Q9BPX1 270 aa20.99■□□□□ 0.95
COMMD4-213ENST00000565834 JPH1Q9HDC5 661 aaPredicted RBP20.99■□□□□ 0.95
COMMD4-213ENST00000565834 KBTBD4Q9NVX7 518 aa20.99■□□□□ 0.95
COMMD4-213ENST00000565834 RGL1Q9NZL6 768 aa20.99■□□□□ 0.95
COMMD4-213ENST00000565834 TUBE1Q9UJT0 475 aa20.99■□□□□ 0.95
COMMD4-213ENST00000565834 SAMM50Q9Y512 469 aa20.99■□□□□ 0.95
COMMD4-213ENST00000565834 PCDHA5Q9Y5H7 936 aa20.99■□□□□ 0.95
COMMD4-213ENST00000565834 WDR64B1ANS9 1081 aa20.99■□□□□ 0.95
COMMD4-213ENST00000565834 GTPBP6O43824 516 aaPredicted RBP20.99■□□□□ 0.95
COMMD4-213ENST00000565834 SMC2O95347 1197 aa20.99■□□□□ 0.95
COMMD4-213ENST00000565834 SFNP31947 248 aa20.99■□□□□ 0.95
COMMD4-213ENST00000565834 MAMDC4Q6UXC1 1216 aa20.99■□□□□ 0.95
COMMD4-213ENST00000565834 SV2BQ7L1I2 683 aa20.99■□□□□ 0.95
COMMD4-213ENST00000565834 KCNK18Q7Z418 384 aa20.99■□□□□ 0.95
COMMD4-213ENST00000565834 GIMAP8Q8ND71 665 aaPredicted RBP20.99■□□□□ 0.95
COMMD4-213ENST00000565834 SMARCE1Q969G3 411 aa20.99■□□□□ 0.95
COMMD4-213ENST00000565834 SLC9A2Q9UBY0 812 aa20.99■□□□□ 0.95
COMMD4-213ENST00000565834 LOXHD1Q8IVV2 1947 aa20.98■□□□□ 0.95
COMMD4-213ENST00000565834 THSD7BQ9C0I4 1608 aa20.98■□□□□ 0.95
COMMD4-213ENST00000565834 CCNE2O96020 404 aa20.98■□□□□ 0.95
COMMD4-213ENST00000565834 MYL1P05976 194 aa20.98■□□□□ 0.95
COMMD4-213ENST00000565834 MUTP22033 750 aa20.98■□□□□ 0.95
COMMD4-213ENST00000565834 AMPD3Q01432 767 aa20.98■□□□□ 0.95
COMMD4-213ENST00000565834 SP2Q02086 613 aa20.98■□□□□ 0.95
COMMD4-213ENST00000565834 CTTNQ14247 550 aaKnown RBP20.98■□□□□ 0.95
COMMD4-213ENST00000565834 GAS2L3Q86XJ1 694 aa20.98■□□□□ 0.95
COMMD4-213ENST00000565834 TPH2Q8IWU9 490 aa20.98■□□□□ 0.95
COMMD4-213ENST00000565834 KCTD17Q8N5Z5 321 aa20.98■□□□□ 0.95
COMMD4-213ENST00000565834 RDM1Q8NG50 284 aa20.98■□□□□ 0.95
COMMD4-213ENST00000565834 NPLOC4Q8TAT6 608 aa20.98■□□□□ 0.95
COMMD4-213ENST00000565834 SOCS4Q8WXH5 440 aa20.98■□□□□ 0.95
COMMD4-213ENST00000565834 SLITRK3O94933 977 aa20.97■□□□□ 0.95
COMMD4-213ENST00000565834 UBA1P22314 1058 aaKnown RBP20.97■□□□□ 0.95
COMMD4-213ENST00000565834 FCGRTP55899 365 aa20.97■□□□□ 0.95
COMMD4-213ENST00000565834 DPYDQ12882 1025 aa20.97■□□□□ 0.95
COMMD4-213ENST00000565834 NEDD9Q14511 834 aa20.97■□□□□ 0.95
COMMD4-213ENST00000565834 DHX8Q14562 1220 aaKnown RBP20.97■□□□□ 0.95
COMMD4-213ENST00000565834 MCM6Q14566 821 aa20.97■□□□□ 0.95
COMMD4-213ENST00000565834 STX1AQ16623 288 aa20.97■□□□□ 0.95
COMMD4-213ENST00000565834 SMAP1Q8IYB5 467 aaPredicted RBP20.97■□□□□ 0.95
COMMD4-213ENST00000565834 VTA1Q9NP79 307 aa20.97■□□□□ 0.95
COMMD4-213ENST00000565834 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.97■□□□□ 0.95
COMMD4-213ENST00000565834 DNM3Q9UQ16 869 aa20.97■□□□□ 0.95
COMMD4-213ENST00000565834 ZSWIM8A7E2V4 1837 aa20.96■□□□□ 0.95
COMMD4-213ENST00000565834 E9PMD0 336 aa20.96■□□□□ 0.95
COMMD4-213ENST00000565834 TBC1D8O95759 1140 aa20.96■□□□□ 0.95
COMMD4-213ENST00000565834 P4HBP07237 508 aaKnown RBP20.96■□□□□ 0.95
COMMD4-213ENST00000565834 HOXC6P09630 235 aa20.96■□□□□ 0.95
COMMD4-213ENST00000565834 CASP1P29466 404 aa20.96■□□□□ 0.95
COMMD4-213ENST00000565834 RGS2P41220 211 aa20.96■□□□□ 0.95
COMMD4-213ENST00000565834 CUL4BQ13620 913 aa20.96■□□□□ 0.95
COMMD4-213ENST00000565834 CYFIP1Q7L576 1253 aa20.96■□□□□ 0.95
COMMD4-213ENST00000565834 MSL3Q8N5Y2 521 aaKnown RBP20.96■□□□□ 0.95
COMMD4-213ENST00000565834 SPATA20Q8TB22 786 aa20.96■□□□□ 0.95
COMMD4-213ENST00000565834 USP6NLQ92738 828 aa20.96■□□□□ 0.95
COMMD4-213ENST00000565834 SYNGAP1Q96PV0 1343 aa20.96■□□□□ 0.95
COMMD4-213ENST00000565834 LXNQ9BS40 222 aa20.96■□□□□ 0.95
COMMD4-213ENST00000565834 TINF2Q9BSI4 451 aa20.96■□□□□ 0.95
COMMD4-213ENST00000565834 CFHR5Q9BXR6 569 aa20.96■□□□□ 0.95
COMMD4-213ENST00000565834 BLZF1Q9H2G9 400 aa20.96■□□□□ 0.95
COMMD4-213ENST00000565834 BCAS3Q9H6U6 928 aa20.96■□□□□ 0.95
COMMD4-213ENST00000565834 BIN1O00499 593 aa20.96■□□□□ 0.95
COMMD4-213ENST00000565834 LACTBP83111 547 aaPredicted RBP20.96■□□□□ 0.95
COMMD4-213ENST00000565834 NT5DC1Q5TFE4 455 aa20.96■□□□□ 0.95
COMMD4-213ENST00000565834 BANK1Q8NDB2 785 aa20.96■□□□□ 0.95
COMMD4-213ENST00000565834 SCFD2Q8WU76 684 aa20.96■□□□□ 0.95
COMMD4-213ENST00000565834 LRRC27Q9C0I9 530 aa20.96■□□□□ 0.95
COMMD4-213ENST00000565834 RNF186Q9NXI6 227 aa20.96■□□□□ 0.95
COMMD4-213ENST00000565834 DDX41Q9UJV9 622 aaKnown RBP20.96■□□□□ 0.95
COMMD4-213ENST00000565834 PCDHA10Q9Y5I2 948 aa20.96■□□□□ 0.95
COMMD4-213ENST00000565834 SORBS3O60504 671 aa20.95■□□□□ 0.94
COMMD4-213ENST00000565834 TRPA1O75762 1119 aa20.95■□□□□ 0.94
COMMD4-213ENST00000565834 SNAI1O95863 264 aaPredicted RBP20.95■□□□□ 0.94
COMMD4-213ENST00000565834 PLA2G4BP0C869 781 aa20.95■□□□□ 0.94
COMMD4-213ENST00000565834 CTGFP29279 349 aa20.95■□□□□ 0.94
COMMD4-213ENST00000565834 PSMC4P43686 418 aa20.95■□□□□ 0.94
COMMD4-213ENST00000565834 SARSP49591 514 aaKnown RBP20.95■□□□□ 0.94
COMMD4-213ENST00000565834 ACTR2P61160 394 aa20.95■□□□□ 0.94
COMMD4-213ENST00000565834 SP4Q02446 784 aa20.95■□□□□ 0.94
COMMD4-213ENST00000565834 TTLL4Q14679 1199 aa20.95■□□□□ 0.94
COMMD4-213ENST00000565834 LY6KQ17RY6 165 aa20.95■□□□□ 0.94
COMMD4-213ENST00000565834 GSDMAQ96QA5 445 aa20.95■□□□□ 0.94
COMMD4-213ENST00000565834 APBA2Q99767 749 aa20.95■□□□□ 0.94
COMMD4-213ENST00000565834 ANO10Q9NW15 660 aa20.95■□□□□ 0.94
COMMD4-213ENST00000565834 GJD2Q9UKL4 321 aa20.95■□□□□ 0.94
COMMD4-213ENST00000565834 MYH9P35579 1960 aaKnown RBP20.94■□□□□ 0.94
COMMD4-213ENST00000565834 ARIH2O95376 493 aa20.94■□□□□ 0.94
COMMD4-213ENST00000565834 GGPS1O95749 300 aa20.94■□□□□ 0.94
COMMD4-213ENST00000565834 SSBP05455 408 aaKnown RBP eCLIP20.94■□□□□ 0.94
COMMD4-213ENST00000565834 QARSP47897 775 aaKnown RBP20.94■□□□□ 0.94
COMMD4-213ENST00000565834 PSMC6P62333 389 aa20.94■□□□□ 0.94
COMMD4-213ENST00000565834 C7orf25Q9BPX7 421 aa20.94■□□□□ 0.94
COMMD4-213ENST00000565834 TRIM9Q9C026 710 aa20.94■□□□□ 0.94
COMMD4-213ENST00000565834 ZSWIM4Q9H7M6 989 aa20.94■□□□□ 0.94
COMMD4-213ENST00000565834 PDGFCQ9NRA1 345 aa20.94■□□□□ 0.94
COMMD4-213ENST00000565834 MAN1B1Q9UKM7 699 aa20.94■□□□□ 0.94
COMMD4-213ENST00000565834 A0A087WWV3 80 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms