RNA–Protein interactions for RNA: ENST00000565545.1

CSPG4P13-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

TSL 5

Gene CSPG4P13, Length 657 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-201ENST00000565545 DIS3LQ8TF46 1054 aaKnown RBP21.42■■□□□ 1.02
CSPG4P13-201ENST00000565545 CDK5RAP3Q96JB5 506 aa21.42■■□□□ 1.02
CSPG4P13-201ENST00000565545 FUCA2Q9BTY2 467 aa21.42■■□□□ 1.02
CSPG4P13-201ENST00000565545 TEKT3Q9BXF9 490 aa21.42■■□□□ 1.02
CSPG4P13-201ENST00000565545 NT5C3AQ9H0P0 336 aa21.42■■□□□ 1.02
CSPG4P13-201ENST00000565545 AGO4Q9HCK5 861 aaKnown RBP21.42■■□□□ 1.02
CSPG4P13-201ENST00000565545 TBC1D22BQ9NU19 505 aa21.42■■□□□ 1.02
CSPG4P13-201ENST00000565545 STK17AQ9UEE5 414 aa21.42■■□□□ 1.02
CSPG4P13-201ENST00000565545 VAV3Q9UKW4 847 aa21.42■■□□□ 1.02
CSPG4P13-201ENST00000565545 IPO5O00410 1097 aaKnown RBP21.41■■□□□ 1.02
CSPG4P13-201ENST00000565545 EIF3JO75822 258 aaKnown RBP21.41■■□□□ 1.02
CSPG4P13-201ENST00000565545 MDM2Q00987 491 aaPredicted RBP21.41■■□□□ 1.02
CSPG4P13-201ENST00000565545 POSTNQ15063 836 aa21.41■■□□□ 1.02
CSPG4P13-201ENST00000565545 GNPTABQ3T906 1256 aa21.41■■□□□ 1.02
CSPG4P13-201ENST00000565545 PDXDC2PQ6P474 469 aa21.41■■□□□ 1.02
CSPG4P13-201ENST00000565545 C7orf61Q8IZ16 206 aa21.41■■□□□ 1.02
CSPG4P13-201ENST00000565545 ANKLE1Q8NAG6 615 aa21.41■■□□□ 1.02
CSPG4P13-201ENST00000565545 SLC17A8Q8NDX2 589 aa21.41■■□□□ 1.02
CSPG4P13-201ENST00000565545 SNX29Q8TEQ0 813 aa21.41■■□□□ 1.02
CSPG4P13-201ENST00000565545 INPP4AQ96PE3 977 aaPredicted RBP21.41■■□□□ 1.02
CSPG4P13-201ENST00000565545 GJD2Q9UKL4 321 aa21.41■■□□□ 1.02
CSPG4P13-201ENST00000565545 MYL1P05976 194 aa21.4■■□□□ 1.02
CSPG4P13-201ENST00000565545 EDNRBP24530 442 aa21.4■■□□□ 1.02
CSPG4P13-201ENST00000565545 MAPK4P31152 587 aa21.4■■□□□ 1.02
CSPG4P13-201ENST00000565545 CNTN2Q02246 1040 aa21.4■■□□□ 1.02
CSPG4P13-201ENST00000565545 WDR78Q5VTH9 848 aa21.4■■□□□ 1.02
CSPG4P13-201ENST00000565545 GJA10Q969M2 543 aa21.4■■□□□ 1.02
CSPG4P13-201ENST00000565545 PAGE5Q96GU1 130 aa21.4■■□□□ 1.02
CSPG4P13-201ENST00000565545 PORCNQ9H237 461 aa21.4■■□□□ 1.02
CSPG4P13-201ENST00000565545 TUBE1Q9UJT0 475 aa21.4■■□□□ 1.02
CSPG4P13-201ENST00000565545 IVNS1ABPQ9Y6Y0 642 aa21.4■■□□□ 1.02
CSPG4P13-201ENST00000565545 PLXNB2O15031 1838 aa21.4■■□□□ 1.02
CSPG4P13-201ENST00000565545 KIAA1217Q5T5P2 1943 aa21.39■■□□□ 1.02
CSPG4P13-201ENST00000565545 SOWAHBA6NEL2 793 aa21.39■■□□□ 1.01
CSPG4P13-201ENST00000565545 GOLGA6L3A6NEY3 463 aa21.39■■□□□ 1.01
CSPG4P13-201ENST00000565545 SMC2O95347 1197 aa21.39■■□□□ 1.01
CSPG4P13-201ENST00000565545 CAVIN2O95810 425 aa21.39■■□□□ 1.01
CSPG4P13-201ENST00000565545 PLCG1P19174 1290 aa21.39■■□□□ 1.01
CSPG4P13-201ENST00000565545 CYP2B6P20813 491 aa21.39■■□□□ 1.01
CSPG4P13-201ENST00000565545 MUTP22033 750 aa21.39■■□□□ 1.01
CSPG4P13-201ENST00000565545 CCT6AP40227 531 aaKnown RBP21.39■■□□□ 1.01
CSPG4P13-201ENST00000565545 TRIM32Q13049 653 aa21.39■■□□□ 1.01
CSPG4P13-201ENST00000565545 ZRSR1Q15695 479 aaKnown RBP21.39■■□□□ 1.01
CSPG4P13-201ENST00000565545 TMEM119Q4V9L6 283 aa21.39■■□□□ 1.01
CSPG4P13-201ENST00000565545 POLR3CQ9BUI4 534 aaPredicted RBP21.39■■□□□ 1.01
CSPG4P13-201ENST00000565545 ZMYND8Q9ULU4 1186 aaPredicted RBP21.39■■□□□ 1.01
CSPG4P13-201ENST00000565545 SOX1O00570 391 aaPredicted RBP21.38■■□□□ 1.01
CSPG4P13-201ENST00000565545 ICAM3P32942 547 aa21.38■■□□□ 1.01
CSPG4P13-201ENST00000565545 TYRO3Q06418 890 aa21.38■■□□□ 1.01
CSPG4P13-201ENST00000565545 PDE4DQ08499 809 aa21.38■■□□□ 1.01
CSPG4P13-201ENST00000565545 GRB10Q13322 594 aa21.38■■□□□ 1.01
CSPG4P13-201ENST00000565545 NAALADL2Q58DX5 795 aa21.38■■□□□ 1.01
CSPG4P13-201ENST00000565545 NCAPH2Q6IBW4 605 aa21.38■■□□□ 1.01
CSPG4P13-201ENST00000565545 B3GNT9Q6UX72 402 aa21.38■■□□□ 1.01
CSPG4P13-201ENST00000565545 LRCH3Q96II8 777 aa21.38■■□□□ 1.01
CSPG4P13-201ENST00000565545 ZFP91Q96JP5 570 aaPredicted RBP21.38■■□□□ 1.01
CSPG4P13-201ENST00000565545 PNMA5Q96PV4 448 aa21.38■■□□□ 1.01
CSPG4P13-201ENST00000565545 LRRC27Q9C0I9 530 aa21.38■■□□□ 1.01
CSPG4P13-201ENST00000565545 FSD2A1L4K1 749 aa21.37■■□□□ 1.01
CSPG4P13-201ENST00000565545 ASB14A6NK59 587 aa21.37■■□□□ 1.01
CSPG4P13-201ENST00000565545 GTPBP6O43824 516 aaPredicted RBP21.37■■□□□ 1.01
CSPG4P13-201ENST00000565545 RPA1P27694 616 aa21.37■■□□□ 1.01
CSPG4P13-201ENST00000565545 AMPD3Q01432 767 aa21.37■■□□□ 1.01
CSPG4P13-201ENST00000565545 SEMA3FQ13275 785 aa21.37■■□□□ 1.01
CSPG4P13-201ENST00000565545 PNOCQ13519 176 aa21.37■■□□□ 1.01
CSPG4P13-201ENST00000565545 EPHA7Q15375 998 aa21.37■■□□□ 1.01
CSPG4P13-201ENST00000565545 STX1AQ16623 288 aa21.37■■□□□ 1.01
CSPG4P13-201ENST00000565545 NT5DC1Q5TFE4 455 aa21.37■■□□□ 1.01
CSPG4P13-201ENST00000565545 GAS2L3Q86XJ1 694 aa21.37■■□□□ 1.01
CSPG4P13-201ENST00000565545 NEK9Q8TD19 979 aa21.37■■□□□ 1.01
CSPG4P13-201ENST00000565545 MORC4Q8TE76 937 aa21.37■■□□□ 1.01
CSPG4P13-201ENST00000565545 TUFT1Q9NNX1 390 aa21.37■■□□□ 1.01
CSPG4P13-201ENST00000565545 KBTBD4Q9NVX7 518 aa21.37■■□□□ 1.01
CSPG4P13-201ENST00000565545 TCEAL9Q9UHQ7 104 aa21.37■■□□□ 1.01
CSPG4P13-201ENST00000565545 RANBP2P49792 3224 aaKnown RBP21.37■■□□□ 1.01
CSPG4P13-201ENST00000565545 PLXNA1Q9UIW2 1896 aa21.37■■□□□ 1.01
CSPG4P13-201ENST00000565545 ASTN1O14525 1302 aa21.36■■□□□ 1.01
CSPG4P13-201ENST00000565545 NFASCO94856 1347 aa21.36■■□□□ 1.01
CSPG4P13-201ENST00000565545 SPATA31C2B4DYI2 1134 aa21.36■■□□□ 1.01
CSPG4P13-201ENST00000565545 DHX15O43143 795 aaKnown RBP21.36■■□□□ 1.01
CSPG4P13-201ENST00000565545 GPR142Q7Z601 462 aa21.36■■□□□ 1.01
CSPG4P13-201ENST00000565545 PLEKHH3Q7Z736 793 aa21.36■■□□□ 1.01
CSPG4P13-201ENST00000565545 ZNF467Q7Z7K2 595 aaPredicted RBP21.36■■□□□ 1.01
CSPG4P13-201ENST00000565545 TRIML1Q8N9V2 468 aa21.36■■□□□ 1.01
CSPG4P13-201ENST00000565545 RDM1Q8NG50 284 aa21.36■■□□□ 1.01
CSPG4P13-201ENST00000565545 TRIB2Q92519 343 aa21.36■■□□□ 1.01
CSPG4P13-201ENST00000565545 SMARCE1Q969G3 411 aa21.36■■□□□ 1.01
CSPG4P13-201ENST00000565545 NUDT12Q9BQG2 462 aa21.36■■□□□ 1.01
CSPG4P13-201ENST00000565545 C11orf49Q9H6J7 331 aa21.36■■□□□ 1.01
CSPG4P13-201ENST00000565545 ANO10Q9NW15 660 aa21.36■■□□□ 1.01
CSPG4P13-201ENST00000565545 DIS3Q9Y2L1 958 aaKnown RBP21.36■■□□□ 1.01
CSPG4P13-201ENST00000565545 ZNF236Q9UL36 1845 aa21.36■■□□□ 1.01
CSPG4P13-201ENST00000565545 LRRC37A2A6NM11 1700 aa21.35■■□□□ 1.01
CSPG4P13-201ENST00000565545 SLC15A5A6NIM6 579 aa21.35■■□□□ 1.01
CSPG4P13-201ENST00000565545 PGK2P07205 417 aa21.35■■□□□ 1.01
CSPG4P13-201ENST00000565545 AFMP43652 599 aa21.35■■□□□ 1.01
CSPG4P13-201ENST00000565545 SARSP49591 514 aaKnown RBP21.35■■□□□ 1.01
CSPG4P13-201ENST00000565545 KRT76Q01546 638 aa21.35■■□□□ 1.01
CSPG4P13-201ENST00000565545 ZNF792Q3KQV3 632 aa21.35■■□□□ 1.01
CSPG4P13-201ENST00000565545 KCNV1Q6PIU1 500 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms