RNA–Protein interactions for RNA: ENST00000563663.5

SCAMP2-203, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 5

Gene SCAMP2, Length 1,787 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-203ENST00000563663 PRR16Q569H4 304 aa16.71■□□□□ 0.27
SCAMP2-203ENST00000563663 PLA2G4DQ86XP0 818 aa16.71■□□□□ 0.27
SCAMP2-203ENST00000563663 FAM184AQ8NB25 1140 aa16.71■□□□□ 0.27
SCAMP2-203ENST00000563663 ETNPPLQ8TBG4 499 aa16.71■□□□□ 0.27
SCAMP2-203ENST00000563663 SPATA33Q96N06 139 aa16.71■□□□□ 0.27
SCAMP2-203ENST00000563663 C16orf70Q9BSU1 422 aa16.71■□□□□ 0.27
SCAMP2-203ENST00000563663 PKD2L1Q9P0L9 805 aa16.71■□□□□ 0.27
SCAMP2-203ENST00000563663 TRIP12Q14669 1992 aaPredicted RBP16.71■□□□□ 0.27
SCAMP2-203ENST00000563663 MSH4O15457 936 aa16.7■□□□□ 0.26
SCAMP2-203ENST00000563663 U2AF2P26368 475 aaKnown RBP eCLIP16.7■□□□□ 0.26
SCAMP2-203ENST00000563663 ATN1P54259 1190 aaPredicted RBP16.7■□□□□ 0.26
SCAMP2-203ENST00000563663 SETQ01105 290 aaPredicted RBP16.7■□□□□ 0.26
SCAMP2-203ENST00000563663 MLLT1Q03111 559 aaPredicted RBP16.7■□□□□ 0.26
SCAMP2-203ENST00000563663 CCDC183Q5T5S1 534 aa16.7■□□□□ 0.26
SCAMP2-203ENST00000563663 B3GNT9Q6UX72 402 aa16.7■□□□□ 0.26
SCAMP2-203ENST00000563663 NEK8Q86SG6 692 aa16.7■□□□□ 0.26
SCAMP2-203ENST00000563663 FOXP1Q9H334 677 aaPredicted RBP16.7■□□□□ 0.26
SCAMP2-203ENST00000563663 PCDH10Q9P2E7 1040 aa16.7■□□□□ 0.26
SCAMP2-203ENST00000563663 CCDC194A0A1B0GVG4 234 aa16.69■□□□□ 0.26
SCAMP2-203ENST00000563663 GSTTP1A0A1W2PQM5 241 aa16.69■□□□□ 0.26
SCAMP2-203ENST00000563663 HAS3O00219 553 aa16.69■□□□□ 0.26
SCAMP2-203ENST00000563663 PSMC6P62333 389 aa16.69■□□□□ 0.26
SCAMP2-203ENST00000563663 UVSSAQ2YD98 709 aa16.69■□□□□ 0.26
SCAMP2-203ENST00000563663 PPP4R3AQ6IN85 833 aa16.69■□□□□ 0.26
SCAMP2-203ENST00000563663 GJA10Q969M2 543 aa16.69■□□□□ 0.26
SCAMP2-203ENST00000563663 UIMC1Q96RL1 719 aa16.69■□□□□ 0.26
SCAMP2-203ENST00000563663 TSPY26PQ9H489 355 aa16.69■□□□□ 0.26
SCAMP2-203ENST00000563663 KCNMB3Q9NPA1 279 aa16.69■□□□□ 0.26
SCAMP2-203ENST00000563663 RRAGDQ9NQL2 400 aaPredicted RBP16.69■□□□□ 0.26
SCAMP2-203ENST00000563663 STARD7Q9NQZ5 370 aa16.69■□□□□ 0.26
SCAMP2-203ENST00000563663 ESPNB1AK53 854 aa16.69■□□□□ 0.26
SCAMP2-203ENST00000563663 IPO5O00410 1097 aaKnown RBP16.69■□□□□ 0.26
SCAMP2-203ENST00000563663 PPFIA4O75335 1185 aa16.69■□□□□ 0.26
SCAMP2-203ENST00000563663 ZNF286BP0CG31 522 aa16.69■□□□□ 0.26
SCAMP2-203ENST00000563663 TRIM29Q14134 588 aa16.69■□□□□ 0.26
SCAMP2-203ENST00000563663 TRIM60Q495X7 471 aa16.69■□□□□ 0.26
SCAMP2-203ENST00000563663 ANKRD33Q7Z3H0 272 aa16.69■□□□□ 0.26
SCAMP2-203ENST00000563663 SLC5A5Q92911 643 aa16.69■□□□□ 0.26
SCAMP2-203ENST00000563663 GLT1D1Q96MS3 346 aa16.69■□□□□ 0.26
SCAMP2-203ENST00000563663 CTAGE1Q96RT6 745 aa16.69■□□□□ 0.26
SCAMP2-203ENST00000563663 PCYT2Q99447 389 aa16.69■□□□□ 0.26
SCAMP2-203ENST00000563663 MTG1Q9BT17 334 aaPredicted RBP16.69■□□□□ 0.26
SCAMP2-203ENST00000563663 MLXIPQ9HAP2 919 aa16.69■□□□□ 0.26
SCAMP2-203ENST00000563663 POLR3EQ9NVU0 708 aa16.69■□□□□ 0.26
SCAMP2-203ENST00000563663 CABYRO75952 493 aa16.68■□□□□ 0.26
SCAMP2-203ENST00000563663 MYL3P08590 195 aa16.68■□□□□ 0.26
SCAMP2-203ENST00000563663 ZNF76P36508 570 aa16.68■□□□□ 0.26
SCAMP2-203ENST00000563663 RTP1P59025 263 aa16.68■□□□□ 0.26
SCAMP2-203ENST00000563663 KRT85P78386 507 aa16.68■□□□□ 0.26
SCAMP2-203ENST00000563663 DGKDQ16760 1214 aa16.68■□□□□ 0.26
SCAMP2-203ENST00000563663 LETM2Q2VYF4 491 aa16.68■□□□□ 0.26
SCAMP2-203ENST00000563663 TRIM50Q86XT4 487 aa16.68■□□□□ 0.26
SCAMP2-203ENST00000563663 GIMAP8Q8ND71 665 aaPredicted RBP16.68■□□□□ 0.26
SCAMP2-203ENST00000563663 PPP1R13LQ8WUF5 828 aa16.68■□□□□ 0.26
SCAMP2-203ENST00000563663 SCAND2PQ9GZW5 306 aaPredicted RBP16.68■□□□□ 0.26
SCAMP2-203ENST00000563663 GDPD2Q9HCC8 539 aa16.68■□□□□ 0.26
SCAMP2-203ENST00000563663 BRMS1Q9HCU9 246 aa16.68■□□□□ 0.26
SCAMP2-203ENST00000563663 JPH1Q9HDC5 661 aaPredicted RBP16.68■□□□□ 0.26
SCAMP2-203ENST00000563663 MYH9P35579 1960 aaKnown RBP16.68■□□□□ 0.26
SCAMP2-203ENST00000563663 KPNA6O60684 536 aa16.67■□□□□ 0.26
SCAMP2-203ENST00000563663 ATG7O95352 703 aa16.67■□□□□ 0.26
SCAMP2-203ENST00000563663 LGALS2P05162 132 aa16.67■□□□□ 0.26
SCAMP2-203ENST00000563663 TOB1P50616 345 aaPredicted RBP16.67■□□□□ 0.26
SCAMP2-203ENST00000563663 DNM1Q05193 864 aaKnown RBP16.67■□□□□ 0.26
SCAMP2-203ENST00000563663 NOSTRINQ8IVI9 506 aa16.67■□□□□ 0.26
SCAMP2-203ENST00000563663 FAM126BQ8IXS8 530 aa16.67■□□□□ 0.26
SCAMP2-203ENST00000563663 HAS1Q92839 578 aa16.67■□□□□ 0.26
SCAMP2-203ENST00000563663 SLC9A2Q9UBY0 812 aa16.67■□□□□ 0.26
SCAMP2-203ENST00000563663 IGKV6D-21A0A0A0MT36 114 aa16.66■□□□□ 0.26
SCAMP2-203ENST00000563663 A0A0U1RQG5 324 aaPredicted RBP16.66■□□□□ 0.26
SCAMP2-203ENST00000563663 VPS37CA5D8V6 355 aaPredicted RBP16.66■□□□□ 0.26
SCAMP2-203ENST00000563663 ARVCFO00192 962 aa16.66■□□□□ 0.26
SCAMP2-203ENST00000563663 ZEB2O60315 1214 aa16.66■□□□□ 0.26
SCAMP2-203ENST00000563663 PSMD10O75832 226 aa16.66■□□□□ 0.26
SCAMP2-203ENST00000563663 HOXC8P31273 242 aa16.66■□□□□ 0.26
SCAMP2-203ENST00000563663 ITGA7Q13683 1181 aa16.66■□□□□ 0.26
SCAMP2-203ENST00000563663 HIC1Q14526 733 aa16.66■□□□□ 0.26
SCAMP2-203ENST00000563663 ZNF577Q9BSK1 485 aa16.66■□□□□ 0.26
SCAMP2-203ENST00000563663 HTATIP2Q9BUP3 242 aa16.66■□□□□ 0.26
SCAMP2-203ENST00000563663 ZSCAN16Q9H4T2 348 aaPredicted RBP16.66■□□□□ 0.26
SCAMP2-203ENST00000563663 DDX25Q9UHL0 483 aaKnown RBP16.66■□□□□ 0.26
SCAMP2-203ENST00000563663 KIF3AQ9Y496 699 aa16.66■□□□□ 0.26
SCAMP2-203ENST00000563663 LGR5O75473 907 aa16.66■□□□□ 0.26
SCAMP2-203ENST00000563663 CD4P01730 458 aa16.66■□□□□ 0.26
SCAMP2-203ENST00000563663 GCFC2P16383 781 aaKnown RBP16.66■□□□□ 0.26
SCAMP2-203ENST00000563663 ACTR2P61160 394 aa16.66■□□□□ 0.26
SCAMP2-203ENST00000563663 SP4Q02446 784 aa16.66■□□□□ 0.26
SCAMP2-203ENST00000563663 TLE2Q04725 743 aa16.66■□□□□ 0.26
SCAMP2-203ENST00000563663 POTEDQ86YR6 584 aa16.66■□□□□ 0.26
SCAMP2-203ENST00000563663 VAV3Q9UKW4 847 aa16.66■□□□□ 0.26
SCAMP2-203ENST00000563663 EMSYQ7Z589 1322 aa16.65■□□□□ 0.26
SCAMP2-203ENST00000563663 TCF7P36402 384 aaPredicted RBP16.65■□□□□ 0.26
SCAMP2-203ENST00000563663 SPIRE1Q08AE8 756 aa16.65■□□□□ 0.26
SCAMP2-203ENST00000563663 FAAP100Q0VG06 881 aa16.65■□□□□ 0.26
SCAMP2-203ENST00000563663 SAFBQ15424 915 aaKnown RBP eCLIP16.65■□□□□ 0.26
SCAMP2-203ENST00000563663 NBPF20Q3BBV1 942 aa16.65■□□□□ 0.26
SCAMP2-203ENST00000563663 BRDTQ58F21 947 aaPredicted RBP16.65■□□□□ 0.26
SCAMP2-203ENST00000563663 ABHD15Q6UXT9 468 aa16.65■□□□□ 0.26
SCAMP2-203ENST00000563663 SESTD1Q86VW0 696 aa16.65■□□□□ 0.26
SCAMP2-203ENST00000563663 TOX2Q96NM4 488 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms