RNA–Protein interactions for RNA: ENST00000563293.1

RPAP1-205, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 3

Gene RPAP1, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-205ENST00000563293 IER5LQ5T953 404 aa10.84□□□□□ -0.67
RPAP1-205ENST00000563293 SYDE2Q5VT97 1194 aa10.84□□□□□ -0.67
RPAP1-205ENST00000563293 SEPT14Q6ZU15 432 aa10.84□□□□□ -0.67
RPAP1-205ENST00000563293 SESTD1Q86VW0 696 aa10.84□□□□□ -0.67
RPAP1-205ENST00000563293 CCDC83Q8IWF9 413 aa10.84□□□□□ -0.67
RPAP1-205ENST00000563293 TRIM22Q8IYM9 498 aa10.84□□□□□ -0.67
RPAP1-205ENST00000563293 FAM177A1Q8N128 213 aaPredicted RBP10.84□□□□□ -0.67
RPAP1-205ENST00000563293 ALG1Q9BT22 464 aa10.84□□□□□ -0.67
RPAP1-205ENST00000563293 CPVLQ9H3G5 476 aa10.84□□□□□ -0.67
RPAP1-205ENST00000563293 COL20A1Q9P218 1284 aa10.84□□□□□ -0.67
RPAP1-205ENST00000563293 GTF2IRD1Q9UHL9 959 aa10.84□□□□□ -0.67
RPAP1-205ENST00000563293 CIZ1Q9ULV3 898 aaPredicted RBP10.84□□□□□ -0.67
RPAP1-205ENST00000563293 ZFHX2Q9C0A1 2572 aaPredicted RBP10.84□□□□□ -0.67
RPAP1-205ENST00000563293 LOC102724159A0A0B4J2E5 919 aa10.83□□□□□ -0.68
RPAP1-205ENST00000563293 PALM3A6NDB9 673 aaPredicted RBP10.83□□□□□ -0.68
RPAP1-205ENST00000563293 PDHBP11177 359 aa10.83□□□□□ -0.68
RPAP1-205ENST00000563293 IRS1P35568 1242 aa10.83□□□□□ -0.68
RPAP1-205ENST00000563293 CCT2P78371 535 aaKnown RBP10.83□□□□□ -0.68
RPAP1-205ENST00000563293 HTRA4P83105 476 aaPredicted RBP10.83□□□□□ -0.68
RPAP1-205ENST00000563293 AKAP17AQ02040 695 aaKnown RBP10.83□□□□□ -0.68
RPAP1-205ENST00000563293 DLX2Q07687 328 aaPredicted RBP10.83□□□□□ -0.68
RPAP1-205ENST00000563293 STK3Q13188 491 aa10.83□□□□□ -0.68
RPAP1-205ENST00000563293 IKBKEQ14164 716 aa10.83□□□□□ -0.68
RPAP1-205ENST00000563293 COL19A1Q14993 1142 aa10.83□□□□□ -0.68
RPAP1-205ENST00000563293 PWP2Q15269 919 aaKnown RBP10.83□□□□□ -0.68
RPAP1-205ENST00000563293 EP400NLQ6ZTU2 488 aa10.83□□□□□ -0.68
RPAP1-205ENST00000563293 NECAB1Q8N987 351 aa10.83□□□□□ -0.68
RPAP1-205ENST00000563293 PRSS33Q8NF86 280 aa10.83□□□□□ -0.68
RPAP1-205ENST00000563293 SMARCC2Q8TAQ2 1214 aa10.83□□□□□ -0.68
RPAP1-205ENST00000563293 MRPL38Q96DV4 380 aaKnown RBP10.83□□□□□ -0.68
RPAP1-205ENST00000563293 TAAR1Q96RJ0 339 aa10.83□□□□□ -0.68
RPAP1-205ENST00000563293 LARP6Q9BRS8 491 aaKnown RBP10.83□□□□□ -0.68
RPAP1-205ENST00000563293 SENP2Q9HC62 589 aa10.83□□□□□ -0.68
RPAP1-205ENST00000563293 MUTYHQ9UIF7 546 aa10.83□□□□□ -0.68
RPAP1-205ENST00000563293 KIAA1217Q5T5P2 1943 aa10.83□□□□□ -0.68
RPAP1-205ENST00000563293 SPTBN4Q9H254 2564 aa10.83□□□□□ -0.68
RPAP1-205ENST00000563293 STK36Q9NRP7 1315 aa10.83□□□□□ -0.68
RPAP1-205ENST00000563293 ZDBF2Q9HCK1 2354 aa10.82□□□□□ -0.68
RPAP1-205ENST00000563293 LARGE1O95461 756 aa10.82□□□□□ -0.68
RPAP1-205ENST00000563293 ZNF286BP0CG31 522 aa10.82□□□□□ -0.68
RPAP1-205ENST00000563293 PSEN2P49810 448 aa10.82□□□□□ -0.68
RPAP1-205ENST00000563293 NUCB2P80303 420 aa10.82□□□□□ -0.68
RPAP1-205ENST00000563293 SSRP1Q08945 709 aaKnown RBP10.82□□□□□ -0.68
RPAP1-205ENST00000563293 ZNF543Q08ER8 600 aa10.82□□□□□ -0.68
RPAP1-205ENST00000563293 TRAF1Q13077 416 aa10.82□□□□□ -0.68
RPAP1-205ENST00000563293 CLUL1Q15846 466 aa10.82□□□□□ -0.68
RPAP1-205ENST00000563293 TMTC3Q6ZXV5 915 aa10.82□□□□□ -0.68
RPAP1-205ENST00000563293 MYOCDQ8IZQ8 938 aa10.82□□□□□ -0.68
RPAP1-205ENST00000563293 CCDC155Q8N6L0 562 aa10.82□□□□□ -0.68
RPAP1-205ENST00000563293 FAM184AQ8NB25 1140 aa10.82□□□□□ -0.68
RPAP1-205ENST00000563293 BANK1Q8NDB2 785 aa10.82□□□□□ -0.68
RPAP1-205ENST00000563293 NSUN7Q8NE18 718 aaKnown RBP10.82□□□□□ -0.68
RPAP1-205ENST00000563293 DBF4BQ8NFT6 615 aa10.82□□□□□ -0.68
RPAP1-205ENST00000563293 SP7Q8TDD2 431 aaPredicted RBP10.82□□□□□ -0.68
RPAP1-205ENST00000563293 RNF26Q9BY78 433 aaPredicted RBP10.82□□□□□ -0.68
RPAP1-205ENST00000563293 FAM217BQ9NTX9 383 aaPredicted RBP10.82□□□□□ -0.68
RPAP1-205ENST00000563293 PNMA2Q9UL42 364 aa10.82□□□□□ -0.68
RPAP1-205ENST00000563293 INSL6Q9Y581 213 aa10.82□□□□□ -0.68
RPAP1-205ENST00000563293 NLRC5Q86WI3 1866 aa10.82□□□□□ -0.68
RPAP1-205ENST00000563293 DCHS1Q96JQ0 3298 aa10.82□□□□□ -0.68
RPAP1-205ENST00000563293 VPS13AQ96RL7 3174 aa10.81□□□□□ -0.68
RPAP1-205ENST00000563293 H3BNC9 293 aa10.81□□□□□ -0.68
RPAP1-205ENST00000563293 HAS3O00219 553 aa10.81□□□□□ -0.68
RPAP1-205ENST00000563293 PRPF3O43395 683 aaKnown RBP10.81□□□□□ -0.68
RPAP1-205ENST00000563293 SORBS3O60504 671 aa10.81□□□□□ -0.68
RPAP1-205ENST00000563293 DEXIO95424 95 aa10.81□□□□□ -0.68
RPAP1-205ENST00000563293 GH1P01241 217 aa10.81□□□□□ -0.68
RPAP1-205ENST00000563293 XBP1P17861 261 aa10.81□□□□□ -0.68
RPAP1-205ENST00000563293 CDC27P30260 824 aa10.81□□□□□ -0.68
RPAP1-205ENST00000563293 GTF2F1P35269 517 aaKnown RBP eCLIP10.81□□□□□ -0.68
RPAP1-205ENST00000563293 ADD1P35611 737 aaKnown RBP10.81□□□□□ -0.68
RPAP1-205ENST00000563293 GPM6BQ13491 265 aa10.81□□□□□ -0.68
RPAP1-205ENST00000563293 MFSD10Q14728 455 aa10.81□□□□□ -0.68
RPAP1-205ENST00000563293 NTRK3Q16288 839 aa10.81□□□□□ -0.68
RPAP1-205ENST00000563293 KIAA0753Q2KHM9 967 aa10.81□□□□□ -0.68
RPAP1-205ENST00000563293 PUS10Q3MIT2 529 aaKnown RBP10.81□□□□□ -0.68
RPAP1-205ENST00000563293 USH1GQ495M9 461 aa10.81□□□□□ -0.68
RPAP1-205ENST00000563293 ADHFE1Q8IWW8 467 aa10.81□□□□□ -0.68
RPAP1-205ENST00000563293 C7orf31Q8N865 590 aa10.81□□□□□ -0.68
RPAP1-205ENST00000563293 DNERQ8NFT8 737 aa10.81□□□□□ -0.68
RPAP1-205ENST00000563293 PABPC5Q96DU9 382 aaKnown RBP10.81□□□□□ -0.68
RPAP1-205ENST00000563293 MYL10Q9BUA6 226 aa10.81□□□□□ -0.68
RPAP1-205ENST00000563293 SPZ1Q9BXG8 430 aa10.81□□□□□ -0.68
RPAP1-205ENST00000563293 MAD2L2Q9UI95 211 aa10.81□□□□□ -0.68
RPAP1-205ENST00000563293 DDX41Q9UJV9 622 aaKnown RBP10.81□□□□□ -0.68
RPAP1-205ENST00000563293 CACNA1HO95180 2353 aa10.81□□□□□ -0.68
RPAP1-205ENST00000563293 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.8□□□□□ -0.68
RPAP1-205ENST00000563293 KLRF2D3W0D1 207 aa10.8□□□□□ -0.68
RPAP1-205ENST00000563293 hCG_1984214I3L0E3 225 aa10.8□□□□□ -0.68
RPAP1-205ENST00000563293 UPP2O95045 317 aa10.8□□□□□ -0.68
RPAP1-205ENST00000563293 GOLGA8HP0CJ92 632 aa10.8□□□□□ -0.68
RPAP1-205ENST00000563293 GJB2P29033 226 aa10.8□□□□□ -0.68
RPAP1-205ENST00000563293 ST3GAL1Q11201 340 aa10.8□□□□□ -0.68
RPAP1-205ENST00000563293 PTK7Q13308 1070 aa10.8□□□□□ -0.68
RPAP1-205ENST00000563293 TEX2Q8IWB9 1127 aa10.8□□□□□ -0.68
RPAP1-205ENST00000563293 TMEM192Q8IY95 271 aa10.8□□□□□ -0.68
RPAP1-205ENST00000563293 ZNF713Q8N859 430 aaPredicted RBP10.8□□□□□ -0.68
RPAP1-205ENST00000563293 SYTL5Q8TDW5 730 aaPredicted RBP10.8□□□□□ -0.68
RPAP1-205ENST00000563293 UBA5Q9GZZ9 404 aa10.8□□□□□ -0.68
RPAP1-205ENST00000563293 RIOX1Q9H6W3 641 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms